Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rab3c

Gene Name Gene ID Reads Annotation
rab3c ENSDARG00000014462, ENSDARG00000042803 508 RAB3C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-263]










Genes with expression patterns similar to rab3c

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rab3c ENSDARG00000014462, ENSDARG00000042803 508 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB3C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-263]
2. nudt5 ENSDARG00000078073 779 1.804 0.962 - - - - - 0.842 - - nudix (nucleoside diphosphate linked moiety X)-type motif 5 [Source:ZFIN;Acc:ZDB-GENE-040625-63]
3. arhgef12b ENSDARG00000100913 1358 1.778 0.989 - - - - - 0.789 - - Rho guanine nucleotide exchange factor (GEF) 12b [Source:ZFIN;Acc:ZDB-GENE-070705-36]
4. CABZ01112521.1 CABZ01112521.1 83 1.728 - 0.931 - - - - 0.797 - -
5. apnl ENSDARG00000090900 21 1.717 - 0.883 0.834 - - - - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
6. DOCK4 DOCK4 78 1.715 - 0.883 0.832 - - - - - -
7. chrna6 ENSDARG00000055559 60 1.715 - 0.883 - - - 0.832 - - - cholinergic receptor, nicotinic, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-090312-91]
8. si:ch211-243a22.1 si:ch211-243a22.1 42 1.711 - 0.883 0.828 - - - - - -
9. bhlhe22 ENSDARG00000058039 1673 1.709 - 0.983 - - - 0.726 - - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
10. pdzd4 175 1.705 - 0.883 - - - 0.822 - - - PDZ domain containing 4, transcript variant X2
11. itsn1 ENSDARG00000000086 684 1.691 0.988 - - - - - 0.703 - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
12. TOM1L2 ENSDARG00000056394 793 1.689 0.988 - - - - - 0.701 - - target of myb1 like 2 membrane trafficking protein [Source:HGNC Symbol;Acc:HGNC:11984]
13. PRR12 PRR12 38 1.687 - 0.883 - - - 0.804 - - -
14. si:dkey-81p22.11 ENSDARG00000093797 68 1.683 - 0.883 0.800 - - - - - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
15. elavl4 ENSDARG00000045639 998 1.683 - 0.834 - - - 0.849 - - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
16. gpr61 ENSDARG00000055570 128 1.675 - 0.883 - - - 0.792 - - - G protein-coupled receptor 61 [Source:ZFIN;Acc:ZDB-GENE-081104-239]
17. AL954676.2 AL954676.2 50 1.66 - 0.883 - - - - 0.777 - -
18. atp2b2 ENSDARG00000044902, ENSDARG00000063433 140 1.66 - 0.883 - - - 0.777 - - - ATPase plasma membrane Ca2+ transporting 2 [Source:ZFIN;Acc:ZDB-GENE-061016-1]
19. SMARCA4 ENSDARG00000104339 48 1.645 - 0.883 - - - 0.762 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
20. fam43b ENSDARG00000070222 92 1.622 - 0.883 - - - 0.739 - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
21. hnrpl 6412 1.621 0.916 - - - - 0.705 - - - heterogeneous nuclear ribonucleoprotein L, transcript variant X1
22. CABZ01073954.1 CABZ01073954.1 258 1.615 - 0.883 - - - 0.732 - - -
23. mb21d2a mb21d2a 421 1.611 - 0.827 - - - 0.784 - - -
24. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 1.587 - - - - - 0.777 0.810 - - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
25. CABZ01007222.1 CABZ01007222.1 78 1.586 - 0.883 - - - 0.703 - - -
26. CABZ01028287.1 CABZ01028287.1 626 1.585 - 0.821 - - - 0.764 - - -
27. nlgn4a 102 1.577 - - - - - 0.781 0.796 - - neuroligin 4a, transcript variant X1
28. KCTD5 KCTD5 109 1.575 - 0.821 - - - 0.754 - - -
29. slc5a11 ENSDARG00000019932 160 1.567 - - - - - 0.784 0.783 - - solute carrier family 5 (sodium/inositol cotransporter), member 11 [Source:ZFIN;Acc:ZDB-GENE-041114-9]
30. fam49a ENSDARG00000006672 939 1.563 - 0.821 - - - 0.742 - - - family with sequence similarity 49, member A [Source:ZFIN;Acc:ZDB-GENE-031002-50]
31. slc35g2b ENSDARG00000045447 378 1.557 - 0.716 - - - 0.841 - - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
32. zgc:174224_2 ENSDARG00000093875 22 1.553 - 0.821 - - - 0.732 - - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
33. mapk11 ENSDARG00000045836 846 1.548 - 0.756 - - - 0.792 - - - mitogen-activated protein kinase 11 [Source:ZFIN;Acc:ZDB-GENE-040625-75]
34. gpr173 ENSDARG00000042922 238 1.548 - - 0.820 - - 0.728 - - - G protein-coupled receptor 173 [Source:ZFIN;Acc:ZDB-GENE-000710-1]
35. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.544 - 0.766 - - - 0.778 - - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
36. grin1a ENSDARG00000027828 1327 1.542 - 0.775 - - - 0.767 - - - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
37. ropn1l ENSDARG00000058370, ENSDARG00000114122 57 1.537 - 0.766 0.771 - - - - - - rhophilin associated tail protein 1-like [Source:ZFIN;Acc:ZDB-GENE-040724-235]
38. FAM120A ENSDARG00000075021 73 1.532 - 0.759 0.773 - - - - - - family with sequence similarity 120A [Source:ZFIN;Acc:ZDB-GENE-110131-10]
39. RAB39B RAB39B 482 1.531 - 0.824 - - - 0.707 - - -
40. kcnh7 ENSDARG00000062687 172 1.53 - 0.701 - - - - 0.829 - - potassium channel, voltage gated eag related subfamily H, member 7 [Source:ZFIN;Acc:ZDB-GENE-120214-39]
41. AP5B1 ENSDARG00000078805 62 1.529 - - - - - 0.732 0.797 - - adaptor related protein complex 5 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-131121-204]
42. sox19b ENSDARG00000040266 532 1.527 - 0.790 - - - 0.737 - - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
43. lrrc24 ENSDARG00000101704 224 1.527 - - - - - 0.754 0.773 - - leucine rich repeat containing 24 [Source:ZFIN;Acc:ZDB-GENE-060503-496]
44. nhlh2 ENSDARG00000025495 1860 1.526 - 0.788 - - - 0.738 - - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
45. 5S_rRNA_7 5S_rRNA_7 55 1.525 - 0.721 - - - 0.804 - - -
46. PRRT4 ENSDARG00000088343 36 1.508 - - - - - 0.706 0.802 - - proline-rich transmembrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-140106-210]
47. RAPGEFL1 ENSDARG00000079912 1074 1.498 - - 0.708 - - - 0.790 - - Rap guanine nucleotide exchange factor (GEF)-like 1 [Source:ZFIN;Acc:ZDB-GENE-131121-404]
48. neurog1 ENSDARG00000056130 3924 1.496 - 0.762 - - - 0.734 - - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
49. hmga1b ENSDARG00000070951 377 1.477 - - - - - 0.746 0.731 - - high mobility group AT-hook 1b [Source:ZFIN;Acc:ZDB-GENE-061013-204]
50. msl2a ENSDARG00000038909 1357 1.468 - 0.765 - - - 0.703 - - - male-specific lethal 2 homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-449]
51. itm2ca ENSDARG00000043448 1265 1.464 - 0.707 - - - 0.757 - - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
52. reep2 ENSDARG00000031382, ENSDARG00000112622 563 1.458 - - - - - 0.713 0.745 - - receptor accessory protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-125]
53. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 1.438 - - - - 0.711 0.727 - - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
54. mafb ENSDARG00000076520 139 1.428 - 0.704 - - - 0.724 - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog b (paralog b) [Source:ZFIN;Acc:ZDB-GENE-141211-38]
55. neo1 neo1 4056 0.992 0.992 - - - - - - - -
56. ENSDARG00000076021 ENSDARG00000076021 162 0.991 0.991 - - - - - - - -
57. ENSDARG00000090222 ENSDARG00000090222 402 0.991 0.991 - - - - - - - -
58. si:ch211-71m22.1 ENSDARG00000058638 169 0.991 0.991 - - - - - - - - si:ch211-71m22.1 [Source:ZFIN;Acc:ZDB-GENE-070705-193]
59. si:dkey-10f21.16 si:dkey-10f21.16 252 0.991 0.991 - - - - - - - -
60. wu:fj13e08 1223 0.99 0.990 - - - - - - - - wu:fj13e08
61. TTC9 ENSDARG00000074363 196 0.99 0.990 - - - - - - - - tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
62. poll ENSDARG00000039613 395 0.99 0.990 - - - - - - - - polymerase (DNA directed), lambda [Source:ZFIN;Acc:ZDB-GENE-040426-2712]
63. e2f8 ENSDARG00000057323 1432 0.99 0.990 - - - - - - - - E2F transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-041111-260]
64. ppcs ENSDARG00000061889 224 0.99 0.990 - - - - - - - - phosphopantothenoylcysteine synthetase [Source:ZFIN;Acc:ZDB-GENE-060512-104]
65. nab1b ENSDARG00000040700 289 0.99 0.990 - - - - - - - - NGFI-A binding protein 1b (EGR1 binding protein 1) [Source:ZFIN;Acc:ZDB-GENE-081105-85]
66. IRF2 ENSDARG00000040465 453 0.99 0.990 - - - - - - - - interferon regulatory factor 2 [Source:ZFIN;Acc:ZDB-GENE-041212-38]
67. adrb2b ENSDARG00000054510, ENSDARG00000111730 428 0.99 0.990 - - - - - - - - adrenoceptor beta 2, surface b [Source:ZFIN;Acc:ZDB-GENE-070410-32]
68. wdtc1 ENSDARG00000059760 1218 0.99 0.990 - - - - - - - - WD and tetratricopeptide repeats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3224]
69. ypel2b ENSDARG00000087258, ENSDARG00000116766 539 0.99 0.990 - - - - - - - - yippee-like 2b [Source:ZFIN;Acc:ZDB-GENE-110419-2]
70. MRAS_1 ENSDARG00000075285 318 0.99 0.990 - - - - - - - - muscle RAS oncogene homolog [Source:HGNC Symbol;Acc:HGNC:7227]
71. sos1 ENSDARG00000100503 388 0.99 0.990 - - - - - - - - son of sevenless homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070209-128]
72. sbf1 ENSDARG00000062968, ENSDARG00000111535 1287 0.99 0.990 - - - - - - - - SET binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-139]
73. MYADML2 ENSDARG00000053953 810 0.989 0.989 - - - - - - - - myeloid-associated differentiation marker-like 2 [Source:ZFIN;Acc:ZDB-GENE-120807-3]
74. armc8 ENSDARG00000062258, ENSDARG00000110157 467 0.989 0.989 - - - - - - - - armadillo repeat containing 8 [Source:ZFIN;Acc:ZDB-GENE-061027-88]
75. b4galnt3b ENSDARG00000058939 413 0.989 0.989 - - - - - - - - beta-1,4-N-acetyl-galactosaminyl transferase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8615]
76. hepacam2 ENSDARG00000061365, ENSDARG00000109776 219 0.989 0.989 - - - - - - - - HEPACAM family member 2 [Source:ZFIN;Acc:ZDB-GENE-060503-135]
77. evi5b ENSDARG00000070839 239 0.989 0.989 - - - - - - - - ecotropic viral integration site 5b [Source:ZFIN;Acc:ZDB-GENE-041111-244]
78. zrsr2 ENSDARG00000058448 335 0.989 0.989 - - - - - - - - zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1495]
79. tbc1d19 ENSDARG00000013842 253 0.989 0.989 - - - - - - - - TBC1 domain family, member 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1265]
80. HOMEZ HOMEZ 1824 0.989 0.989 - - - - - - - -
81. tfcp2 ENSDARG00000060306 1024 0.989 0.989 - - - - - - - - transcription factor CP2 [Source:ZFIN;Acc:ZDB-GENE-030131-2523]
82. pfkfb3 ENSDARG00000001953 656 0.989 0.989 - - - - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2724]
83. cab39 ENSDARG00000043451 1326 0.989 0.989 - - - - - - - - calcium binding protein 39 [Source:ZFIN;Acc:ZDB-GENE-040625-158]
84. selj 884 0.988 0.988 - - - - - - - - selenoprotein J
85. ttc27 ENSDARG00000007918 1228 0.988 0.988 - - - - - - - - tetratricopeptide repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-030102-1]
86. lrrc40 ENSDARG00000017708 1156 0.988 0.988 - - - - - - - - leucine rich repeat containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6062]
87. PDCL3 ENSDARG00000100651 164 0.988 0.988 - - - - - - - - phosducin like 3 [Source:HGNC Symbol;Acc:HGNC:28860]
88. FAM210A FAM210A 437 0.988 0.988 - - - - - - - -
89. snx15 ENSDARG00000020397, ENSDARG00000110059 491 0.987 0.987 - - - - - - - - sorting nexin 15 [Source:ZFIN;Acc:ZDB-GENE-040426-1377]
90. GIT1 ENSDARG00000039489 1157 0.987 0.987 - - - - - - - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-100408-5]
91. aacs ENSDARG00000012468 1138 0.987 0.987 - - - - - - - - acetoacetyl-CoA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-903]
92. cp ENSDARG00000010312 1245 0.987 0.987 - - - - - - - - ceruloplasmin [Source:ZFIN;Acc:ZDB-GENE-010522-1]
93. lmo4b ENSDARG00000054749, ENSDARG00000115402 1397 0.987 0.987 - - - - - - - - LIM domain only 4b [Source:ZFIN;Acc:ZDB-GENE-030131-3570]
94. SLC6A16_1 SLC6A16_1 1130 0.987 0.987 - - - - - - - -
95. zgc:66448 ENSDARG00000022952 1045 0.986 0.986 - - - - - - - - zgc:66448 [Source:ZFIN;Acc:ZDB-GENE-030131-5612]
96. ahcyl2 ENSDARG00000039343 1210 0.986 0.986 - - - - - - - - adenosylhomocysteinase-like 2 [Source:ZFIN;Acc:ZDB-GENE-040115-5]
97. ugt5a5 807 0.986 0.986 - - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide A5
98. mier1b ENSDARG00000001447 1680 0.986 0.986 - - - - - - - - mesoderm induction early response 1b, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-070705-170]
99. vps4a ENSDARG00000030114 933 0.986 0.986 - - - - - - - - vacuolar protein sorting 4a homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-388]
100. amer1 ENSDARG00000079624, ENSDARG00000117033 1370 0.986 0.986 - - - - - - - - APC membrane recruitment protein 1 [Source:ZFIN;Acc:ZDB-GENE-070719-2]

There are 1387 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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