Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rab30

Gene Name Gene ID Reads Annotation
rab30 ENSDARG00000037884 1077 RAB30, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-250]










Genes with expression patterns similar to rab30

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rab30 ENSDARG00000037884 1077 8 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 RAB30, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-250]
2. ncl ENSDARG00000002710 16951 2.171 - 0.703 - - - - - 0.724 0.744 nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
3. dpf3 ENSDARG00000025309 1376 1.648 - 0.809 - - - - - 0.839 - D4, zinc and double PHD fingers, family 3 [Source:ZFIN;Acc:ZDB-GENE-041014-190]
4. TSPAN4 TSPAN4 941 1.572 - 0.836 - - - - 0.736 - -
5. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.564 - - - - - - - 0.774 0.790 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
6. marcksa ENSDARG00000004049 2518 1.562 - - - - - - - 0.788 0.774 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
7. TAF15 ENSDARG00000070019 5102 1.559 - - - - - - - 0.753 0.806 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
8. ZNF646 ENSDARG00000061424 1549 1.559 - 0.831 - - - - - - 0.728 zinc finger protein 646 [Source:ZFIN;Acc:ZDB-GENE-160627-3]
9. clvs2 ENSDARG00000053122 1390 1.551 - - - - - - - 0.781 0.770 clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
10. ruvbl2 ENSDARG00000055639, ENSDARG00000115705 890 1.547 0.720 - - - - - - 0.827 - RuvB-like AAA ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-030109-1]
11. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.543 - - - - - - - 0.796 0.747 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
12. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 1.542 - - - - - - - 0.723 0.819 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
13. coe2 coe2 1633 1.539 - - - - - - - 0.750 0.789
14. TNKS TNKS 2775 1.534 - 0.812 - - - - - - 0.722
15. parp1 ENSDARG00000019529 6787 1.53 - - - - - - - 0.737 0.793 poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
16. pdhx ENSDARG00000051756 924 1.525 - 0.724 - - - - 0.801 - - pyruvate dehydrogenase complex, component X [Source:ZFIN;Acc:ZDB-GENE-040426-1539]
17. fez1 ENSDARG00000023174 701 1.508 - - - - - - - 0.806 0.702 fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
18. pcdh19 ENSDARG00000034344 2378 1.507 - - - - - - - 0.753 0.754 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
19. wipi2 ENSDARG00000037871 425 1.506 - 0.706 - - - - 0.800 - - WD repeat domain, phosphoinositide interacting 2 [Source:ZFIN;Acc:ZDB-GENE-040718-488]
20. adnpa ENSDARG00000062002, ENSDARG00000115617 2009 1.501 - - - - - - - 0.785 0.716 activity-dependent neuroprotector homeobox a [Source:ZFIN;Acc:ZDB-GENE-061215-112]
21. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 1.5 - - - - - - - 0.792 0.708 cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
22. casp3a ENSDARG00000017905, ENSDARG00000113754 2819 1.497 - 0.717 - - - - - - 0.780 caspase 3, apoptosis-related cysteine peptidase a [Source:ZFIN;Acc:ZDB-GENE-011210-1]
23. u2af1 ENSDARG00000015325 3217 1.489 - - - - - - - 0.723 0.766 U2 small nuclear RNA auxiliary factor 1 [Source:ZFIN;Acc:ZDB-GENE-020419-1]
24. C7H4orf48 C7H4orf48 1455 1.481 - - - - - - - 0.761 0.720
25. RLTPR 1158 1.479 - - - - - - - 0.735 0.744 RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing, transcript variant X1
26. sin3b ENSDARG00000062472 2025 1.469 - - - - - - - 0.705 0.764 SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
27. wdr5 ENSDARG00000016903 4834 1.467 - - - - - - - 0.723 0.744 WD repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2082]
28. ephb3a ENSDARG00000031548 1872 1.46 0.723 0.737 - - - - - - - eph receptor B3a [Source:ZFIN;Acc:ZDB-GENE-990415-60]
29. prpsap2 ENSDARG00000019326 1463 1.458 - - - - - - - 0.730 0.728 phosphoribosyl pyrophosphate synthetase-associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2077]
30. mllt11 ENSDARG00000071026 2518 1.455 - - - - - - - 0.727 0.728 MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
31. fbxl16 ENSDARG00000060915 259 1.452 - - - - - - - 0.741 0.711 F-box and leucine-rich repeat protein 16 [Source:ZFIN;Acc:ZDB-GENE-120215-180]
32. pou3f2a ENSDARG00000070220 817 1.45 - - - - - - - 0.734 0.716 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
33. ppp4r2a ENSDARG00000026540 1782 1.439 - - - - - - - 0.703 0.736 protein phosphatase 4, regulatory subunit 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4922]
34. ELMO1 ENSDARG00000098753 114 1.434 - - - 0.719 - - - 0.715 - engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
35. zc3h13 ENSDARG00000037177, ENSDARG00000113331 2662 1.433 - 0.715 - - - - - 0.718 - zinc finger CCCH-type containing 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1619]
36. si:ch211-202e12.3 401 1.432 - - - - - - - 0.731 0.701 si:ch211-202e12.3, transcript variant X6
37. bud31 ENSDARG00000017084 3892 1.426 - - - - - - - 0.726 0.700 BUD31 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040720-3]
38. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.423 - - - - - - - 0.717 0.706 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
39. tfap2b ENSDARG00000012667 746 1.414 - - - - - - 0.705 0.709 - transcription factor AP-2 beta [Source:ZFIN;Acc:ZDB-GENE-050417-394]
40. zranb2 ENSDARG00000044332 6723 1.413 - 0.704 - - - - - - 0.709 zinc finger, RAN-binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2743]
41. zgc:100832 ENSDARG00000012035 462 0.896 0.896 - - - - - - - - zgc:100832 [Source:ZFIN;Acc:ZDB-GENE-040801-53]
42. vcanb ENSDARG00000009401 3611 0.895 - 0.895 - - - - - - - versican b [Source:ZFIN;Acc:ZDB-GENE-030131-2185]
43. pcyt1aa ENSDARG00000011233 1985 0.889 - 0.889 - - - - - - - phosphate cytidylyltransferase 1, choline, alpha a [Source:ZFIN;Acc:ZDB-GENE-050417-108]
44. usf1l ENSDARG00000014463, ENSDARG00000109684, ENSDARG00000114279 1581 0.886 - 0.886 - - - - - - - upstream transcription factor 1, like [Source:ZFIN;Acc:ZDB-GENE-040426-2269]
45. TBC1D13 815 0.88 - 0.880 - - - - - - - TBC1 domain family, member 13
46. cul1b ENSDARG00000007691 719 0.86 - 0.860 - - - - - - - cullin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2887]
47. nhp2l1b nhp2l1b 3898 0.858 - - - - - - - 0.858 -
48. rbpja ENSDARG00000003398 1309 0.848 - 0.848 - - - - - - - recombination signal binding protein for immunoglobulin kappa J region a [Source:ZFIN;Acc:ZDB-GENE-031117-1]
49. rrp7a ENSDARG00000098934 1123 0.846 - 0.846 - - - - - - - ribosomal RNA processing 7 homolog A [Source:ZFIN;Acc:ZDB-GENE-050417-38]
50. brd9 ENSDARG00000017143 936 0.846 - 0.846 - - - - - - - bromodomain containing 9 [Source:ZFIN;Acc:ZDB-GENE-060502-1]
51. eif4ea ENSDARG00000077012, ENSDARG00000115520 979 0.845 - 0.845 - - - - - - - eukaryotic translation initiation factor 4ea [Source:ZFIN;Acc:ZDB-GENE-040413-1]
52. gpx7 ENSDARG00000091511 3045 0.842 - 0.842 - - - - - - - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
53. timm13 ENSDARG00000058297 4447 0.841 - 0.841 - - - - - - - translocase of inner mitochondrial membrane 13 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-167]
54. zgc:158309 zgc:158309 2696 0.84 - 0.840 - - - - - - -
55. psmc1b ENSDARG00000043561, ENSDARG00000112404 2148 0.839 - 0.839 - - - - - - - proteasome 26S subunit, ATPase 1b [Source:ZFIN;Acc:ZDB-GENE-040625-69]
56. mn1b ENSDARG00000079248 882 0.836 - 0.836 - - - - - - - meningioma 1b [Source:ZFIN;Acc:ZDB-GENE-080917-23]
57. h3f3a 66671 0.835 - - - - - - - 0.835 - H3 histone, family 3A, transcript variant X1
58. zgc:158564 ENSDARG00000052244 954 0.833 - 0.833 - - - - - - - zgc:158564 [Source:ZFIN;Acc:ZDB-GENE-070112-1662]
59. uqcrc2a ENSDARG00000014794 3949 0.832 - 0.832 - - - - - - - ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
60. twistnb ENSDARG00000024416 1077 0.832 - 0.832 - - - - - - - TWIST neighbor [Source:ZFIN;Acc:ZDB-GENE-041007-3]
61. slc22a15 ENSDARG00000055445 188 0.827 0.827 - - - - - - - - solute carrier family 22, member 15 [Source:ZFIN;Acc:ZDB-GENE-070928-5]
62. slc25a12 ENSDARG00000102362 2773 0.827 - 0.827 - - - - - - - solute carrier family 25 (aspartate/glutamate carrier), member 12 [Source:ZFIN;Acc:ZDB-GENE-031006-11]
63. gemin8 ENSDARG00000053496, ENSDARG00000115240 1214 0.825 - 0.825 - - - - - - - gem (nuclear organelle) associated protein 8 [Source:ZFIN;Acc:ZDB-GENE-041114-189]
64. atxn7l2a ENSDARG00000055300, ENSDARG00000116622 444 0.824 0.824 - - - - - - - - ataxin 7-like 2a [Source:ZFIN;Acc:ZDB-GENE-060519-13]
65. C11H12orf10 C11H12orf10 1305 0.824 - 0.824 - - - - - - -
66. rcor2 ENSDARG00000008278 1678 0.823 - - - - - - - 0.823 - REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
67. aldh1a2 ENSDARG00000053493, ENSDARG00000113122 1679 0.821 - 0.821 - - - - - - - aldehyde dehydrogenase 1 family, member A2 [Source:ZFIN;Acc:ZDB-GENE-011010-3]
68. ccnk ENSDARG00000034146 1255 0.821 - - - - - - - 0.821 - cyclin K [Source:ZFIN;Acc:ZDB-GENE-030131-5126]
69. ldb1a ENSDARG00000010137 3035 0.821 - - - - - - - 0.821 - LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
70. smarcad1 smarcad1 1457 0.821 - - - - - - - - 0.821
71. gap43 ENSDARG00000099744 4114 0.82 - - - - - - - - 0.820 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
72. MYOT ENSDARG00000076312 1791 0.819 - 0.819 - - - - - - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
73. mtmr7b ENSDARG00000070412, ENSDARG00000112046 724 0.817 - - - - - - - 0.817 - myotubularin related protein 7b [Source:ZFIN;Acc:ZDB-GENE-050913-66]
74. zdhhc8b ENSDARG00000018508 1327 0.817 - 0.817 - - - - - - - zinc finger, DHHC-type containing 8b [Source:ZFIN;Acc:ZDB-GENE-030407-3]
75. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 0.816 - 0.816 - - - - - - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
76. CU929408.1 CU929408.1 714 0.815 - 0.815 - - - - - - -
77. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 0.815 - - - - - - - 0.815 - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
78. tcea1 ENSDARG00000003531 2912 0.814 - - - - - - - - 0.814 transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
79. paqr3a ENSDARG00000017703, ENSDARG00000117061 2018 0.813 - 0.813 - - - - - - - progestin and adipoQ receptor family member IIIa [Source:ZFIN;Acc:ZDB-GENE-040426-1667]
80. WDFY3 ENSDARG00000078890 2092 0.812 - 0.812 - - - - - - - WD repeat and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-153]
81. pin4 ENSDARG00000004527 3598 0.812 - 0.812 - - - - - - - protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) [Source:ZFIN;Acc:ZDB-GENE-050522-117]
82. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 0.81 - - - - - - - 0.810 - contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
83. ilf3b ENSDARG00000105177 9473 0.81 - - - - - - - 0.810 - interleukin enhancer binding factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-587]
84. zcchc10 ENSDARG00000091092 1333 0.809 - 0.809 - - - - - - - zinc finger, CCHC domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-6172]
85. rcbtb2 ENSDARG00000090687 1658 0.809 - 0.809 - - - - - - - regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 [Source:ZFIN;Acc:ZDB-GENE-071016-3]
86. cops5 ENSDARG00000057624 1485 0.809 - 0.809 - - - - - - - COP9 signalosome subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1686]
87. nup155 ENSDARG00000001777 3417 0.808 - 0.808 - - - - - - - nucleoporin 155 [Source:ZFIN;Acc:ZDB-GENE-040426-711]
88. sf3a1 ENSDARG00000041887 6702 0.808 - - - - - - - - 0.808 splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
89. UTP14A UTP14A 1471 0.808 - 0.808 - - - - - - -
90. gon4l ENSDARG00000005867 982 0.807 - - - - - - 0.807 - - gon-4-like (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-070117-2447]
91. tbl3 ENSDARG00000052344 1530 0.806 - 0.806 - - - - - - - transducin (beta)-like 3 [Source:ZFIN;Acc:ZDB-GENE-041114-104]
92. mrps9 ENSDARG00000061505 1636 0.806 - 0.806 - - - - - - - mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
93. polr1d ENSDARG00000037570 860 0.804 - - - - - - - 0.804 - RNA polymerase I and III subunit D [Source:ZFIN;Acc:ZDB-GENE-040930-4]
94. ipo9 ENSDARG00000016753, ENSDARG00000113327 936 0.804 - - - - - - - 0.804 - importin 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2953]
95. puf60a ENSDARG00000032175 5618 0.804 - - - - - - - - 0.804 poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
96. pink1 ENSDARG00000001929 320 0.803 - 0.803 - - - - - - - PTEN induced putative kinase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-53]
97. ssbp4 ENSDARG00000056483 10196 0.803 - - - - - - - 0.803 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
98. osbpl2a ENSDARG00000053804 1883 0.803 - 0.803 - - - - - - - oxysterol binding protein-like 2a [Source:ZFIN;Acc:ZDB-GENE-091116-46]
99. tmem198a ENSDARG00000042115 1694 0.803 - - - - - - - - 0.803 transmembrane protein 198a [Source:ZFIN;Acc:ZDB-GENE-070912-716]
100. dnaja2l ENSDARG00000010745 2367 0.803 - - - - - - - - 0.803 DnaJ (Hsp40) homolog, subfamily A, member 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-2884]

There are 733 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA