Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rab11fip1a

Gene Name Gene ID Reads Annotation
rab11fip1a ENSDARG00000046124 69 RAB11 family interacting protein 1 (class I) a [Source:ZFIN;Acc:ZDB-GENE-051113-116]










Genes with expression patterns similar to rab11fip1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rab11fip1a ENSDARG00000046124 69 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB11 family interacting protein 1 (class I) a [Source:ZFIN;Acc:ZDB-GENE-051113-116]
2. slc6a2 ENSDARG00000016141 49 2.342 - - 0.719 - - - 0.845 - 0.778 solute carrier family 6 (neurotransmitter transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-110408-4]
3. si:ch211-284e13.5 ENSDARG00000094725 68 2.291 - 0.766 - - - - 0.784 - 0.741 si:ch211-284e13.5 [Source:ZFIN;Acc:ZDB-GENE-060526-162]
4. vtg3 ENSDARG00000016448 8 1.77 - 0.874 - - - 0.896 - - - vitellogenin 3, phosvitinless [Source:ZFIN;Acc:ZDB-GENE-991019-2]
5. foxi1 ENSDARG00000104566 176 1.77 - 0.874 - - - 0.896 - - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
6. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 1.76 - 0.864 - - - 0.896 - - - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
7. irf1b ENSDARG00000043249 30 1.754 - - - - - 0.896 0.858 - - interferon regulatory factor 1b [Source:ZFIN;Acc:ZDB-GENE-041114-13]
8. dbpa ENSDARG00000063014 107 1.748 - 0.903 - - - - 0.845 - - D site albumin promoter binding protein a [Source:ZFIN;Acc:ZDB-GENE-060503-802]
9. rdh14a ENSDARG00000039299 79 1.712 - - - - - 0.822 0.890 - - retinol dehydrogenase 14a [Source:ZFIN;Acc:ZDB-GENE-041010-124]
10. tprn ENSDARG00000101102 97 1.711 - 0.874 - - - 0.837 - - - taperin [Source:ZFIN;Acc:ZDB-GENE-081104-254]
11. si:dkey-247i3.3 si:dkey-247i3.3 297 1.692 - 0.862 - - - 0.830 - - -
12. si:dkey-286j17.3 si:dkey-286j17.3 8 1.665 0.820 - - - - - 0.845 - -
13. cyp11a1 ENSDARG00000002347, ENSDARG00000111941 209 1.657 0.812 - - - - - 0.845 - - cytochrome P450, family 11, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-010306-1]
14. pdcb ENSDARG00000017634 10 1.653 - - - - - - 0.845 - 0.808 phosducin b [Source:ZFIN;Acc:ZDB-GENE-031023-2]
15. gcnt3 ENSDARG00000060471 37 1.649 - - - - - 0.804 0.845 - - glucosaminyl (N-acetyl) transferase 3, mucin type [Source:ZFIN;Acc:ZDB-GENE-110411-253]
16. mknk1 ENSDARG00000018411 749 1.647 - 0.733 - - - - - - 0.914 MAP kinase interacting serine/threonine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080220-11]
17. si:dkey-261l7.2 ENSDARG00000094345 51 1.641 - - - - - - 0.845 - 0.796 si:dkey-261l7.2 [Source:ZFIN;Acc:ZDB-GENE-090313-288]
18. eno1b ENSDARG00000013750 63 1.64 - 0.880 - - - - - - 0.760 enolase 1b, (alpha) [Source:ZFIN;Acc:ZDB-GENE-040426-1651]
19. CU104716.2 CU104716.2 10 1.638 0.793 - - - - - 0.845 - -
20. si:dkey-264b2.3 19 1.635 - 0.903 - - 0.732 - - - - si:dkey-264b2.3, transcript variant X2
21. fbxo15 ENSDARG00000016897 18 1.634 - 0.882 - - - 0.752 - - - F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]
22. armc7 ENSDARG00000061197 310 1.634 - 0.803 - - - 0.831 - - - armadillo repeat containing 7 [Source:ZFIN;Acc:ZDB-GENE-060929-288]
23. guk1b ENSDARG00000005776 23 1.633 - 0.888 - - - - - - 0.745 guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
24. HTR7 17 1.629 0.743 0.886 - - - - - - - 5-hydroxytryptamine receptor 7
25. cldn11a ENSDARG00000020031 284 1.629 - 0.874 - - - - - - 0.755 claudin 11a [Source:ZFIN;Acc:ZDB-GENE-040718-369]
26. flvcr2b ENSDARG00000031506 170 1.616 - - - - - 0.724 0.892 - - feline leukemia virus subgroup C cellular receptor family, member 2b [Source:ZFIN;Acc:ZDB-GENE-041210-312]
27. si:ch211-190k17.13 si:ch211-190k17.13 48 1.614 - - - - - - 0.845 - 0.769
28. nfkb2 ENSDARG00000038687, ENSDARG00000112821 468 1.596 0.826 0.770 - - - - - - - nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) [Source:ZFIN;Acc:ZDB-GENE-030131-6701]
29. SLC37A3 176 1.594 0.787 - - - - - 0.807 - - solute carrier family 37 member 3, transcript variant X4
30. PLEKHA2 PLEKHA2 43 1.583 - - - - - 0.809 0.774 - -
31. bmb ENSDARG00000096603 120 1.571 - 0.869 - - - - - - 0.702 brambleberry [Source:ZFIN;Acc:ZDB-GENE-030131-5577]
32. si:dkey-182g1.2 ENSDARG00000052680, ENSDARG00000109368 147 1.57 - - - - - 0.858 - - 0.712 si:dkey-182g1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-619]
33. zgc:152938 ENSDARG00000102586 97 1.56 - - - - - 0.715 0.845 - - zgc:152938 [Source:ZFIN;Acc:ZDB-GENE-061013-458]
34. si:ch211-198e13.3 5 1.56 - 0.738 - - - 0.822 - - - si:ch211-198e13.3, transcript variant X1
35. RTKN_1 RTKN_1 176 1.555 - 0.760 - - - 0.795 - - -
36. TRIM8 TRIM8 5 1.55 - - - - - - 0.845 0.705 -
37. si:ch211-152p11.8 46 1.549 - - - - - 0.766 0.783 - - si:ch211-152p11.8, transcript variant X2
38. dhrs9 ENSDARG00000019260 250 1.546 0.809 - - - - - - - 0.737 dehydrogenase/reductase (SDR family) member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1249]
39. capslb ENSDARG00000003414 77 1.544 - 0.763 - - - 0.781 - - - calcyphosine-like b [Source:ZFIN;Acc:ZDB-GENE-050417-298]
40. zc3h10 ENSDARG00000030335 236 1.537 - - - - - 0.775 - - 0.762 zinc finger CCCH-type containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2359]
41. si:dkeyp-72g6.2 si:dkeyp-72g6.2 121 1.531 0.755 - - - - 0.776 - - -
42. TMEM260 ENSDARG00000076362 63 1.53 - 0.813 - - - - 0.717 - - transmembrane protein 260 [Source:ZFIN;Acc:ZDB-GENE-030131-4198]
43. mctp2a ENSDARG00000001414 307 1.524 0.754 0.770 - - - - - - - multiple C2 domains, transmembrane 2a [Source:ZFIN;Acc:ZDB-GENE-040724-63]
44. C20H8orf82 C20H8orf82 91 1.516 - - - - - 0.752 - - 0.764
45. C25H12orf5 C25H12orf5 65 1.511 - - - - - 0.720 0.791 - -
46. ms4a17a.11 ENSDARG00000094809 1086 1.509 0.799 0.710 - - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.11 [Source:ZFIN;Acc:ZDB-GENE-050417-157]
47. nfat5 nfat5 94 1.493 - - - - - - 0.715 - 0.778
48. si:dkey-46g23.2 ENSDARG00000115817 11 1.481 - - - - 0.724 - 0.757 - - si:dkey-46g23.2 [Source:ZFIN;Acc:ZDB-GENE-070705-476]
49. CDH24 CDH24 325 1.475 0.704 0.771 - - - - - - -
50. inaa ENSDARG00000011862 115 1.469 - 0.715 - - - - - - 0.754 internexin neuronal intermediate filament protein, alpha a [Source:ZFIN;Acc:ZDB-GENE-060531-65]
51. CABZ01072853.1 CABZ01072853.1 35 1.469 - 0.760 - - - - - - 0.709
52. slc35b1 ENSDARG00000038213 465 1.434 0.728 - - - - - - - 0.706 solute carrier family 35, member B1 [Source:ZFIN;Acc:ZDB-GENE-040912-148]
53. per3 ENSDARG00000010519 331 1.42 0.704 0.716 - - - - - - - period circadian clock 3 [Source:ZFIN;Acc:ZDB-GENE-000804-1]
54. slc46a3 ENSDARG00000077313 14 1 - - - - - - 1.000 - - solute carrier family 46, member 3 [Source:ZFIN;Acc:ZDB-GENE-100105-2]
55. PRKRIR PRKRIR 261 1 - - - - - - 1.000 - -
56. NLRC5 ENSDARG00000024631 11 1 - - - - - - 1.000 - - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
57. zgc:123068 ENSDARG00000017489 15 1 - - - - - - 1.000 - - zgc:123068 [Source:ZFIN;Acc:ZDB-GENE-051030-98]
58. GM2A ENSDARG00000088439 55 1 - - - - - - 1.000 - - GM2 ganglioside activator [Source:ZFIN;Acc:ZDB-GENE-050417-373]
59. gpr112b gpr112b 28 0.967 - - - - - - 0.967 - -
60. trpc6a ENSDARG00000056625, ENSDARG00000111066 4 0.967 - - - - - - 0.967 - - transient receptor potential cation channel, subfamily C, member 6a [Source:ZFIN;Acc:ZDB-GENE-040724-114]
61. KCNK2 KCNK2 89 0.967 - - - - - - 0.967 - -
62. si:dkey-256i11.2 ENSDARG00000093713 102 0.967 - - - - - 0.967 - - - si:dkey-256i11.2 [Source:ZFIN;Acc:ZDB-GENE-110913-47]
63. zgc:171704 ENSDARG00000018048 14 0.967 - - - - - 0.967 - - - zgc:171704 [Source:ZFIN;Acc:ZDB-GENE-070820-16]
64. si:rp71-1i20.2 ENSDARG00000043198 113 0.967 - - - - - 0.967 - - - si:rp71-1i20.2 [Source:ZFIN;Acc:ZDB-GENE-040724-207]
65. chmp6b ENSDARG00000102024 37 0.959 - - - - - 0.959 - - - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
66. ttll1 ENSDARG00000090778 114 0.951 - 0.951 - - - - - - - tubulin tyrosine ligase-like family, member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1326]
67. CT573263.1 ENSDARG00000112940 108 0.949 - - - - - - 0.949 - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:108184006]
68. si:dkey-253d23.11 ENSDARG00000079236 128 0.949 - - - - - - 0.949 - - si:dkey-253d23.11 [Source:ZFIN;Acc:ZDB-GENE-050208-631]
69. PEG3_22 PEG3_22 33 0.947 - 0.947 - - - - - - -
70. si:dkeyp-27e10.6 si:dkeyp-27e10.6 36 0.942 - - - - - - 0.942 - -
71. CR391986.2 CR391986.2 52 0.942 - - - - - - 0.942 - -
72. zgc:193801 ENSDARG00000076552 37 0.941 - - - - - - 0.941 - - zgc:193801 [Source:ZFIN;Acc:ZDB-GENE-081022-40]
73. CD53 CD53 108 0.939 - - - - - - 0.939 - -
74. mlycd ENSDARG00000104732, ENSDARG00000117073 5 0.937 - - - - - - 0.937 - - malonyl-CoA decarboxylase [Source:ZFIN;Acc:ZDB-GENE-070410-120]
75. fam73b 76 0.932 - 0.932 - - - - - - - family with sequence similarity 73, member B
76. xkr8.3 ENSDARG00000039996 457 0.928 - 0.928 - - - - - - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-041010-107]
77. DHX30 ENSDARG00000077839 78 0.927 - - - - - 0.927 - - - DEAH (Asp-Glu-Ala-His) box helicase 30 [Source:ZFIN;Acc:ZDB-GENE-130530-833]
78. CR388231.1 ENSDARG00000098710 153 0.926 - 0.926 - - - - - - -
79. gtf3c4 ENSDARG00000069538 130 0.926 - 0.926 - - - - - - - general transcription factor IIIC, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-041008-147]
80. C24H18orf8 C24H18orf8 87 0.925 - - - - - 0.925 - - -
81. si:dkey-270b7.5 si:dkey-270b7.5 11 0.925 - - - - - 0.925 - - -
82. tbc1d22a ENSDARG00000045510 363 0.925 - 0.925 - - - - - - - TBC1 domain family, member 22a [Source:ZFIN;Acc:ZDB-GENE-041114-144]
83. CU638738.1 CU638738.1 131 0.924 - 0.924 - - - - - - -
84. KIF21A_1 KIF21A_1 237 0.924 - 0.924 - - - - - - -
85. wu:fe05a04 ENSDARG00000087530 843 0.922 - 0.922 - - - - - - - wu:fe05a04 [Source:ZFIN;Acc:ZDB-GENE-030131-4873]
86. eml3 ENSDARG00000058038 449 0.922 - - - - - - 0.922 - - echinoderm microtubule associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-110304-3]
87. si:ch73-138i16.1 ENSDARG00000095562 8 0.92 - 0.920 - - - - - - - si:ch73-138i16.1 [Source:ZFIN;Acc:ZDB-GENE-070705-208]
88. syn1 ENSDARG00000060368, ENSDARG00000111164 397 0.92 - 0.920 - - - - - - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
89. rbks ENSDARG00000019877 126 0.918 - 0.918 - - - - - - - ribokinase [Source:ZFIN;Acc:ZDB-GENE-040625-112]
90. hspb2 ENSDARG00000052450, ENSDARG00000114010 139 0.918 - 0.918 - - - - - - - heat shock protein, alpha-crystallin-related, b2 [Source:ZFIN;Acc:ZDB-GENE-050417-260]
91. nostrin ENSDARG00000077866 85 0.916 - 0.916 - - - - - - - nitric oxide synthase trafficking [Source:ZFIN;Acc:ZDB-GENE-070522-2]
92. ube3d ENSDARG00000026178 244 0.915 - 0.915 - - - - - - - ubiquitin protein ligase E3D [Source:ZFIN;Acc:ZDB-GENE-091218-3]
93. LDLRAD4 LDLRAD4 1237 0.913 - 0.913 - - - - - - -
94. s1pr5b ENSDARG00000052192 52 0.913 - 0.913 - - - - - - - sphingosine-1-phosphate receptor 5b [Source:ZFIN;Acc:ZDB-GENE-061201-27]
95. HUS1 ENSDARG00000101611 187 0.913 - - - - - 0.913 - - - HUS1 checkpoint clamp component [Source:HGNC Symbol;Acc:HGNC:5309]
96. DRD5 DRD5 142 0.913 - 0.913 - - - - - - -
97. si:ch211-74m13.3 ENSDARG00000076144 55 0.913 - 0.913 - - - - - - - si:ch211-74m13.3 [Source:ZFIN;Acc:ZDB-GENE-060503-219]
98. otud4 ENSDARG00000077810 120 0.912 - 0.912 - - - - - - - OTU deubiquitinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5338]
99. slc13a3 ENSDARG00000069478, ENSDARG00000115362 100 0.911 - - - - - - 0.911 - - solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2486]
100. SNORA62 SNORA62 39 0.911 - 0.911 - - - - - - -

There are 1354 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA