Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for r3hdm4

Gene Name Gene ID Reads Annotation
r3hdm4 ENSDARG00000063254 201 R3H domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1352]










Genes with expression patterns similar to r3hdm4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. r3hdm4 ENSDARG00000063254 201 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 R3H domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1352]
2. pou3f2a ENSDARG00000070220 817 2.241 - - - - - 0.767 0.742 0.732 - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
3. nr4a2a ENSDARG00000017007 140 1.821 - - - - - 1.000 0.821 - - nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184]
4. si:dkey-253d23.9 ENSDARG00000074820 24 1.821 - - - - - 1.000 0.821 - - si:dkey-253d23.9 [Source:ZFIN;Acc:ZDB-GENE-050208-648]
5. rpz3 ENSDARG00000069728 11 1.821 - - - - - 1.000 0.821 - - rapunzel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4784]
6. foxb1a ENSDARG00000089042 101 1.803 - - - - - 1.000 0.803 - - forkhead box B1a [Source:ZFIN;Acc:ZDB-GENE-990616-47]
7. efna3a ENSDARG00000014675 68 1.779 - - - - - 0.955 0.824 - - ephrin-A3a [Source:ZFIN;Acc:ZDB-GENE-060503-186]
8. cdc42ep2 ENSDARG00000053959 32 1.772 - - - - - 1.000 0.772 - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]
9. si:dkey-162b3.5 si:dkey-162b3.5 24 1.772 - - - - - 1.000 0.772 - -
10. CR339051.1 CR339051.1 9 1.772 - - - - - 1.000 0.772 - -
11. tceanc2 ENSDARG00000062919 32 1.772 - - - - - 1.000 0.772 - - transcription elongation factor A (SII) N-terminal and central domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070705-486]
12. CU633848.1 CU633848.1 4 1.772 - - - - - 1.000 0.772 - -
13. CABZ01087111.1 CABZ01087111.1 42 1.772 - - - 0.772 - 1.000 - - -
14. zgc:195245 ENSDARG00000078917, ENSDARG00000115812 49 1.75 - - - - - 0.937 0.813 - - zgc:195245 [Source:ZFIN;Acc:ZDB-GENE-081022-200]
15. klhl24 klhl24 40 1.747 - - - 0.747 - 1.000 - - -
16. pole2 ENSDARG00000100028 42 1.746 - - - 0.746 - 1.000 - - - polymerase (DNA directed), epsilon 2 [Source:ZFIN;Acc:ZDB-GENE-020419-16]
17. CABZ01041962.1 ENSDARG00000076082 690 1.714 0.739 0.975 - - - - - - - uncharacterized LOC798124 [Source:NCBI gene;Acc:798124]
18. cxcl-c1c cxcl-c1c 159 1.702 - 0.997 - 0.705 - - - - -
19. rnf165a ENSDARG00000077906 133 1.7 - - - - - 1.000 0.700 - - ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
20. clstn1 ENSDARG00000031720 5286 1.694 0.730 0.964 - - - - - - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
21. sstr1a ENSDARG00000104922 22 1.648 - - - - - 0.878 0.770 - - somatostatin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-090429-1]
22. sst3 61 1.634 - - - - - 0.862 0.772 - - somatostatin 3
23. lin7b ENSDARG00000037932 150 1.634 - - - - - 0.728 0.906 - - lin-7 homolog B (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-1]
24. mir219-1 101 1.615 - - - - - 0.794 0.821 - - microRNA 219-1
25. sox12 ENSDARG00000025847 681 1.574 - - - - - 0.712 0.862 - - SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]
26. odz4 odz4 822 1.57 0.712 - - - - - 0.858 - -
27. NETO2 121 1.569 - - - - - 0.864 0.705 - - neuropilin and tolloid like 2, transcript variant X2
28. si:ch211-141e20.2 ENSDARG00000093349 61 1.563 - - - 0.813 - - 0.750 - - si:ch211-141e20.2 [Source:ZFIN;Acc:ZDB-GENE-070912-75]
29. fancg ENSDARG00000024967, ENSDARG00000113462 82 1.557 - - - 0.829 - 0.728 - - - FA complementation group G [Source:ZFIN;Acc:ZDB-GENE-050417-103]
30. si:dkey-276l13.6 si:dkey-276l13.6 71 1.546 0.776 - - - - - 0.770 - -
31. brinp3b ENSDARG00000075352 14 1.543 - - - - - 0.771 0.772 - - bone morphogenetic protein/retinoic acid inducible neural-specific 3b [Source:ZFIN;Acc:ZDB-GENE-121022-1]
32. ANK1_1 ANK1_1 507 1.537 - - - - - 0.717 0.820 - -
33. BX323994.1 ENSDARG00000078927 15 1.501 - - - 0.729 - - 0.772 - - uncharacterized LOC108190035 [Source:NCBI gene;Acc:108190035]
34. BX897671.1 BX897671.1 10 1.5 - - - - - 0.728 0.772 - -
35. heyl ENSDARG00000055798, ENSDARG00000112770 76 1.477 - - - - - 0.764 0.713 - - hes-related family bHLH transcription factor with YRPW motif-like [Source:ZFIN;Acc:ZDB-GENE-030131-7074]
36. draxin ENSDARG00000058256, ENSDARG00000111676 266 1.472 - - - - - 0.747 0.725 - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
37. PPP2R2A PPP2R2A 50 1.472 - - - 0.708 - 0.764 - - -
38. pou2f2a ENSDARG00000019658, ENSDARG00000036816 2027 1.44 - - - - - 0.717 0.723 - - POU class 2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-060310-2]
39. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 1.416 0.709 - - - - - - 0.707 - contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
40. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.413 0.706 - - - - - - 0.707 - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
41. si:dkey-6a5.10 si:dkey-6a5.10 17 1 - - - - - 1.000 - - -
42. AL844567.1_1 AL844567.1_1 34 1 - - - - - 1.000 - - -
43. si:dkeyp-104b3.21 ENSDARG00000103964 6 1 - - - - - 1.000 - - - si:dkeyp-104b3.21 [Source:ZFIN;Acc:ZDB-GENE-070912-626]
44. si:dkey-47k20.7 ENSDARG00000056014 1 1 - - - - - 1.000 - - - si:dkey-47k20.7 [Source:ZFIN;Acc:ZDB-GENE-060503-264]
45. gzmk ENSDARG00000028780 1 1 - - - - - 1.000 - - - granzyme K [Source:ZFIN;Acc:ZDB-GENE-091204-352]
46. TMEM136 TMEM136 13 1 - - - - - 1.000 - - -
47. si:dkey-45e15.9 si:dkey-45e15.9 0 1 - - - - - 1.000 - - -
48. gpr88 24 1 - - - - - 1.000 - - - G protein-coupled receptor 88
49. CABZ01023423.1 CABZ01023423.1 8 1 - - - - - 1.000 - - -
50. si:ch211-274k16.6 si:ch211-274k16.6 26 1 - - - - - 1.000 - - -
51. CR846080.4 CR846080.4 6 1 - - - - - 1.000 - - -
52. mdm1 ENSDARG00000045675 64 1 - - - - - 1.000 - - - Mdm1 nuclear protein homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041210-117]
53. si:ch211-208k15.1 ENSDARG00000088650 11 1 - - - - - 1.000 - - - si:ch211-208k15.1 [Source:ZFIN;Acc:ZDB-GENE-100922-189]
54. si:dkey-222f2.7 ENSDARG00000071667 1 1 - - - - - 1.000 - - - si:dkey-222f2.7 [Source:ZFIN;Acc:ZDB-GENE-050208-727]
55. si:ch211-255i3.4 ENSDARG00000095152 7 1 - - - - - 1.000 - - - si:ch211-255i3.4 [Source:ZFIN;Acc:ZDB-GENE-100922-237]
56. si:ch211-207l22.2 si:ch211-207l22.2 1 1 - - - - - 1.000 - - -
57. si:ch211-243a22.1 si:ch211-243a22.1 42 1 - - - - - 1.000 - - -
58. slc6a11a ENSDARG00000074002 189 1 - - - - - 1.000 - - - solute carrier family 6 (neurotransmitter transporter), member 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3729]
59. si:dkeyp-82a1.8 ENSDARG00000095539 6 1 - - - - - 1.000 - - - si:dkeyp-82a1.8 [Source:ZFIN;Acc:ZDB-GENE-081104-479]
60. si:dkey-111b14.2 si:dkey-111b14.2 25 1 - - - - - 1.000 - - -
61. olfcg9 ENSDARG00000105189 1 1 - - - - - 1.000 - - - olfactory receptor C family, g9 [Source:ZFIN;Acc:ZDB-GENE-081029-6]
62. ENSDARG00000086059 ENSDARG00000086059 9 1 - - - - - 1.000 - - -
63. kctd4 ENSDARG00000068691, ENSDARG00000116087 85 1 - - - - - 1.000 - - - potassium channel tetramerization domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040704-71]
64. slc1a8a ENSDARG00000104204 1 1 - - - - - 1.000 - - - solute carrier family 1 (glutamate transporter), member 8a [Source:ZFIN;Acc:ZDB-GENE-101111-8]
65. efr3a ENSDARG00000005163, ENSDARG00000115083 7 1 - - - - - 1.000 - - - EFR3 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1681]
66. CR788320.1 CR788320.1 1 1 - - - - - 1.000 - - -
67. grapb ENSDARG00000022668 6 1 - - - - - 1.000 - - - GRB2 related adaptor protein b [Source:ZFIN;Acc:ZDB-GENE-050913-4]
68. si:ch211-229o8.4 si:ch211-229o8.4 1 1 - - - - - 1.000 - - -
69. BX000981.1 ENSDARG00000092940 1 1 - - - - - 1.000 - - -
70. ankrd52a ENSDARG00000036826, ENSDARG00000112185 7 1 - - - - - 1.000 - - - ankyrin repeat domain 52a [Source:ZFIN;Acc:ZDB-GENE-050522-247]
71. BEGAIN_1 BEGAIN_1 7 1 - - - - - 1.000 - - -
72. si:dkey-109j17.5 ENSDARG00000104891 2 1 - - - - - 1.000 - - - si:dkey-109j17.5 [Source:ZFIN;Acc:ZDB-GENE-090313-173]
73. mucms1 ENSDARG00000069566 0 1 - - - - - 1.000 - - - mucin, multiple PTS and SEA group, member 1 [Source:ZFIN;Acc:ZDB-GENE-061009-17]
74. CU896645.1 CU896645.1 10 1 - - - - - 1.000 - - -
75. si:dkey-11o15.7 ENSDARG00000058023, ENSDARG00000089758 0 1 - - - - - 1.000 - - - si:dkey-11o15.7 [Source:ZFIN;Acc:ZDB-GENE-091204-328]
76. MFAP4_5 MFAP4_5 4 1 - - - - - 1.000 - - -
77. C14orf80 C14orf80 20 1 - - - - - 1.000 - - -
78. si:ch211-207e7.1 si:ch211-207e7.1 33 1 - - - - - 1.000 - - -
79. si:dkey-167k11.3 si:dkey-167k11.3 3 1 - - - - - 1.000 - - -
80. nbn ENSDARG00000040303 43 1 - - - - - 1.000 - - - nibrin [Source:ZFIN;Acc:ZDB-GENE-041008-35]
81. cacng7b ENSDARG00000070624 18 1 - - - - - 1.000 - - - calcium channel, voltage-dependent, gamma subunit 7b [Source:ZFIN;Acc:ZDB-GENE-100921-51]
82. rrh ENSDARG00000039534 4 1 - - - - - 1.000 - - - retinal pigment epithelium-derived rhodopsin homolog [Source:ZFIN;Acc:ZDB-GENE-040912-94]
83. si:ch73-346o4.3 si:ch73-346o4.3 29 1 - - - - - 1.000 - - -
84. vwc2 ENSDARG00000076495 22 1 - - - - - 1.000 - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
85. si:dkey-105n5.3 si:dkey-105n5.3 9 1 - - - - - 1.000 - - -
86. gng2 ENSDARG00000056831 81 1 - - - - - 1.000 - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
87. si:ch211-76l23.5 si:ch211-76l23.5 26 1 - - - - - 1.000 - - -
88. olfcd3 ENSDARG00000068576 0 1 - - - - - 1.000 - - - olfactory receptor C family, d3 [Source:ZFIN;Acc:ZDB-GENE-050712-4]
89. ddhd1b ENSDARG00000037042, ENSDARG00000111543, ENSDARG00000113512 12 1 - - - - - 1.000 - - - DDHD domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040724-18]
90. FAM13C FAM13C 1 1 - - - - - 1.000 - - -
91. si:ch73-226l13.2 ENSDARG00000095939 0 1 - - - - - 1.000 - - - si:ch73-226l13.2 [Source:ZFIN;Acc:ZDB-GENE-110411-18]
92. sh2d4b sh2d4b 1 1 - - - - - 1.000 - - -
93. si:ch211-260c23.1 13 1 - - - - - 1.000 - - - si:ch211-260c23.1, transcript variant X7
94. samd10b ENSDARG00000094377 18 1 - - - - - 1.000 - - - sterile alpha motif domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-090312-179]
95. FP085391.3 FP085391.3 14 1 - - - - - 1.000 - - -
96. acp6 ENSDARG00000040064 197 1 - - - - - 1.000 - - - acid phosphatase 6, lysophosphatidic [Source:ZFIN;Acc:ZDB-GENE-050208-290]
97. fsd1l ENSDARG00000059432, ENSDARG00000113444, ENSDARG00000114848 3 1 - - - - - 1.000 - - - fibronectin type III and SPRY domain containing 1-like [Source:ZFIN;Acc:ZDB-GENE-070501-9]
98. IGFN1_2 IGFN1_2 3 1 - - - - - 1.000 - - -
99. si:ch211-12e1.5 si:ch211-12e1.5 14 1 - - - - - 1.000 - - -
100. BX548000.1 ENSDARG00000099044 45 1 - - - - - 1.000 - - -

There are 1130 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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