Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ptx4

Gene Name Gene ID Reads Annotation
ptx4 ENSDARG00000038072 2 pentraxin 4, long [Source:ZFIN;Acc:ZDB-GENE-120215-70]










Genes with expression patterns similar to ptx4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptx4 ENSDARG00000038072 2 3 - - - 1.000 - - - 1.000 1.000 pentraxin 4, long [Source:ZFIN;Acc:ZDB-GENE-120215-70]
2. clec3ba ENSDARG00000076541 3 2 - - - - - - - 1.000 1.000 C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
3. si:dkey-82i20.3 si:dkey-82i20.3 6 1.973 - - - 0.973 - - - - 1.000
4. org ENSDARG00000076474 16 1 - - - - - - - - 1.000 oogenesis-related gene [Source:ZFIN;Acc:ZDB-GENE-050208-584]
5. si:ch73-177h5.2 ENSDARG00000020812 0 1 - - - - - - - - 1.000 si:ch73-177h5.2 [Source:ZFIN;Acc:ZDB-GENE-081104-247]
6. si:ch211-233m11.1 ENSDARG00000074653 1 1 - - - - - - - - 1.000 si:ch211-233m11.1 [Source:ZFIN;Acc:ZDB-GENE-081028-16]
7. adck1 ENSDARG00000062561 22 1 - - - - - - - 1.000 - aarF domain containing kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080401-5]
8. SEMA4F ENSDARG00000100308 1 1 - - - - - - - - 1.000 ssemaphorin 4F [Source:HGNC Symbol;Acc:HGNC:10734]
9. GLRA2 ENSDARG00000075012, ENSDARG00000114839 0 1 - - - - - - - - 1.000 glycine receptor, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-090407-1]
10. si:ch211-113a14.19_1 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 15 1 - - - - - - - - 1.000 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
11. si:ch73-334e23.1 si:ch73-334e23.1 0 1 - - - - - - - 1.000 -
12. TAAR1 TAAR1 0 1 - - - - - - - - 1.000
13. ppid_1 ENSDARG00000038835 4 1 - - - - - - - - 1.000 peptidylprolyl isomerase D [Source:ZFIN;Acc:ZDB-GENE-040625-34]
14. CCDC18 ENSDARG00000078822 5 1 - - - - - - - - 1.000 coiled-coil domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5414]
15. si:dkey-25o1.6 si:dkey-25o1.6 5 1 - - - - - - - - 1.000
16. ttc25 ENSDARG00000058140 2 1 - - - - - - - 1.000 - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
17. si:dkey-176f19.7 ENSDARG00000103348 10 1 - - - - - - - - 1.000 si:dkey-176f19.7 [Source:ZFIN;Acc:ZDB-GENE-110913-130]
18. BX682234.1 ENSDARG00000074732 5 1 - - - - - - - 1.000 - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
19. TDRD6 ENSDARG00000070052 1 1 - - - - - - - - 1.000 tudor domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-041001-210]
20. GGT5 GGT5 1 1 - - - - - - - - 1.000
21. bckdhb ENSDARG00000014676 17 1 - - - - - - - 1.000 - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
22. grin2cb ENSDARG00000077560 9 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, N-methyl D-aspartate 2Cb [Source:ZFIN;Acc:ZDB-GENE-100308-2]
23. si:ch211-278p9.3 ENSDARG00000094098 0 1 - - - - - - - - 1.000 si:ch211-278p9.3 [Source:ZFIN;Acc:ZDB-GENE-081028-38]
24. CABZ01078515.1 CABZ01078515.1 25 1 - - - - - - - 1.000 -
25. CABZ01081747.2 CABZ01081747.2 9 1 - - - - - - - - 1.000
26. asap3 ENSDARG00000021896 19 1 - - - - - - - 1.000 - ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-050913-39]
27. si:ch211-196n4.2 si:ch211-196n4.2 0 1 - - - - - - - - 1.000
28. zymnd12 17 1 - - - - - - - 1.000 - zinc finger, MYND-type containing 12, transcript variant X1
29. si:dkey-34f9.2 si:dkey-34f9.2 0 1 - - - - - - - - 1.000
30. ubb ENSDARG00000093313, ENSDARG00000112953 4 1 - - - - - - - - 1.000 ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10]
31. ccdc79 2 1 - - - - - - - 1.000 - coiled-coil domain containing 79
32. BX546499.1 ENSDARG00000092602 1 1 - - - - - - - - 1.000
33. si:ch211-57f7.7 ENSDARG00000093131 8 1 - - - - - - - 1.000 - si:ch211-57f7.7 [Source:ZFIN;Acc:ZDB-GENE-090313-119]
34. cyp2p9 ENSDARG00000022631 1 1 - - - - - - - - 1.000 cytochrome P450, family 2, subfamily P, polypeptide 9 [Source:ZFIN;Acc:ZDB-GENE-040120-2]
35. zgc:172323 ENSDARG00000053201 1 1 - - - - - - - - 1.000 zgc:172323 [Source:ZFIN;Acc:ZDB-GENE-080204-113]
36. PLA2G4C_1 PLA2G4C_1 2 1 - - - - - - - - 1.000
37. wdr27 ENSDARG00000053386 2 1 - - - - - - - - 1.000 WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
38. CABZ01112732.1 ENSDARG00000068453 4 1 - - - - - - - - 1.000 tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
39. si:dkey-98f17.5 ENSDARG00000068863, ENSDARG00000116489 7 1 - - - - - - - - 1.000 si:dkey-98f17.5 [Source:ZFIN;Acc:ZDB-GENE-060526-354]
40. si:dkey-15h8.3 si:dkey-15h8.3 0 1 - - - - - - - 1.000 -
41. CABZ01070007.1 CABZ01070007.1 5 1 - - - - - - - 1.000 -
42. tecpr1a ENSDARG00000062515 7 1 - - - - - - - - 1.000 tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
43. FAM185A ENSDARG00000019142 3 1 - - - - - - - - 1.000 family with sequence similarity 185, member A [Source:ZFIN;Acc:ZDB-GENE-131121-241]
44. BX321870.1 ENSDARG00000098519 9 1 - - - - - - - - 1.000
45. CABZ01071530.1 CABZ01071530.1 1 1 - - - - - - - 1.000 -
46. si:ch211-197g22.1 si:ch211-197g22.1 1 1 - - - - - - - - 1.000
47. si:ch211-145h19.4 si:ch211-145h19.4 1 1 - - - - - - - - 1.000
48. LDLR_1 LDLR_1 0 1 - - - - - - - 1.000 -
49. si:dkey-6n3.3 si:dkey-6n3.3 9 1 - - - - - - - - 1.000
50. or131-2 ENSDARG00000073812 0 1 - - - - - - - - 1.000 odorant receptor, family H, subfamily 131, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-46]
51. CNGB3 CNGB3 7 1 - - - - - - - - 1.000
52. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1 - - - - - - - 1.000 - purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
53. ARAP1 3 1 - - - - - - - - 1.000 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
54. si:ch73-27j14.2 si:ch73-27j14.2 32 1 - - - - - - - 1.000 -
55. si:ch211-234c11.3_1 ENSDARG00000093615 10 1 - - - - - - - - 1.000 si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
56. si:ch211-12e13.12 ENSDARG00000094737 1 1 - - - - - - - - 1.000 si:ch211-12e13.12 [Source:ZFIN;Acc:ZDB-GENE-070424-121]
57. UIMC1 200 1 - - - - - - - 1.000 - ubiquitin interaction motif containing 1
58. si:dkey-233h12.4 si:dkey-233h12.4 2 1 - - - - - - - 1.000 -
59. CCDC66 2 1 - - - - - - - - 1.000 coiled-coil domain containing 66
60. TMPRSS7 5 1 - - - - - - - - 1.000 transmembrane protease, serine 7
61. mvb12bb ENSDARG00000079478 9 1 - - - - - - - - 1.000 multivesicular body subunit 12Bb [Source:ZFIN;Acc:ZDB-GENE-080414-2]
62. si:dkey-220o10.3 si:dkey-220o10.3 0 1 - - - - - - - - 1.000
63. si:dkey-11e23.3 si:dkey-11e23.3 3 1 - - - - - - - 1.000 -
64. MYO1G ENSDARG00000036104 1 1 - - - - - - - - 1.000 myosin IG [Source:HGNC Symbol;Acc:HGNC:13880]
65. vtg4 ENSDARG00000078429, ENSDARG00000116698 0 1 - - - - - - - - 1.000 vitellogenin 4 [Source:ZFIN;Acc:ZDB-GENE-001201-3]
66. si:dkey-104n9.1 ENSDARG00000093042 41 1 - - - - - - - 1.000 - si:dkey-104n9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-300]
67. wisp2 ENSDARG00000077882 3 1 - - - - - - - - 1.000 WNT1 inducible signaling pathway protein 2 [Source:ZFIN;Acc:ZDB-GENE-060223-1]
68. ftr56 ENSDARG00000030954 23 1 - - - - - - - 1.000 - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
69. si:dkey-93m18.5 si:dkey-93m18.5 2 1 - - - - - - - - 1.000
70. SSTR2 SSTR2 12 1 - - - - - - - - 1.000
71. DNAJC11 1 1 - - - - - - - - 1.000 DnaJ heat shock protein family (Hsp40) member C11
72. apba1a ENSDARG00000103848 0 1 - - - - - - - - 1.000 amyloid beta (A4) precursor protein-binding, family A, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-175]
73. CR394568.1 CR394568.1 0 1 - - - - - - - - 1.000
74. si:ch1073-351l9.1 si:ch1073-351l9.1 1 1 - - - - - - - - 1.000
75. si:ch211-51n3.1 si:ch211-51n3.1 26 1 - - - - - - - 1.000 -
76. Y_RNA Y_RNA 0 1 - - - - - - - 1.000 -
77. si:dkey-199k11.5 si:dkey-199k11.5 4 1 - - - - - - - - 1.000
78. CR457462.1 CR457462.1 11 1 - - - - - - - - 1.000
79. gba ENSDARG00000076058 1 1 - - - - - - - - 1.000 glucosidase, beta, acid [Source:ZFIN;Acc:ZDB-GENE-100922-270]
80. lifra ENSDARG00000098857 11 1 - - - - - - - - 1.000 leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
81. si:ch211-215l11.8 si:ch211-215l11.8 0 1 - - - - - - - - 1.000
82. FIG4 ENSDARG00000107912 0 1 - - - - - - - - 1.000 FIG4 phosphoinositide 5-phosphatase [Source:HGNC Symbol;Acc:HGNC:16873]
83. si:dkeyp-51f11.3 si:dkeyp-51f11.3 0 1 - - - - - - - - 1.000
84. psmb11 psmb11 5 1 - - - - - - - 1.000 -
85. MTSS1L MTSS1L 7 1 - - - - - - - 1.000 -
86. si:dkey-179o14.4 si:dkey-179o14.4 2 1 - - - - - - - 1.000 -
87. dcp2_1 ENSDARG00000104242 74 1 - - - - - - - - 1.000 decapping mRNA 2 [Source:ZFIN;Acc:ZDB-GENE-040426-851]
88. si:ch211-113a14.19_5 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 2 1 - - - - - - - - 1.000 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
89. si:dkey-54g2.5 si:dkey-54g2.5 2 1 - - - - - - - 1.000 -
90. rom1b ENSDARG00000026926 4 1 - - - - - - - 1.000 - retinal outer segment membrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1073]
91. si:ch211-170d8.5 ENSDARG00000046142 0 1 - - - - - - - - 1.000 si:ch211-170d8.5 [Source:ZFIN;Acc:ZDB-GENE-081105-120]
92. SYNPO 2 1 - - - - - - - - 1.000 synaptopodin, transcript variant X2
93. tusc3 ENSDARG00000078854 4 1 - - - - - - - - 1.000 tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
94. FAM46D FAM46D 0 1 - - - - - - - - 1.000
95. si:ch211-89o5.3 si:ch211-89o5.3 5 1 - - - - - - - - 1.000
96. DSEL DSEL 1 1 - - - - - - - - 1.000
97. si:dkey-30c15.9 si:dkey-30c15.9 4 1 - - - - - - - 1.000 -
98. si:dkey-270b7.2 si:dkey-270b7.2 0 1 - - - - - - - 1.000 -
99. CYP27A1_2 CYP27A1_2 5 1 - - - - - - - - 1.000
100. si:zfos-979f1.2 ENSDARG00000011652 24 1 - - - - - - - - 1.000 si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]

There are 197 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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