Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ptprub_1

Gene Name Gene ID Reads Annotation
ptprub_1 ENSDARG00000101081 0 protein tyrosine phosphatase, receptor type, U, b [Source:ZFIN;Acc:ZDB-GENE-030131-7036]










Genes with expression patterns similar to ptprub_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prph2a ENSDARG00000038018 2 2 - - - 1.000 - - - - 1.000 peripherin 2a (retinal degeneration, slow) [Source:ZFIN;Acc:ZDB-GENE-000616-8]
2. si:ch211-209n20.58 si:ch211-209n20.58 1 2 - - - 1.000 - - - - 1.000
3. ptprub_1 ENSDARG00000101081 0 2 - - - 1.000 - - - - 1.000 protein tyrosine phosphatase, receptor type, U, b [Source:ZFIN;Acc:ZDB-GENE-030131-7036]
4. gnrh2 ENSDARG00000044754, ENSDARG00000116186 55 1.728 - - - 0.761 - - - - 0.967 gonadotropin-releasing hormone 2 [Source:ZFIN;Acc:ZDB-GENE-030516-1]
5. zgc:171731 ENSDARG00000014657, ENSDARG00000112592 5 1 - - - - - - - - 1.000 zgc:171731 [Source:ZFIN;Acc:ZDB-GENE-071004-27]
6. CT025771.1 ENSDARG00000117721 13 1 - - - 1.000 - - - - -
7. spg20a 8 1 - - - 1.000 - - - - - spastic paraplegia 20a (Troyer syndrome), transcript variant X1
8. GRAMD2_1 GRAMD2_1 12 1 - - - 1.000 - - - - -
9. or115-11 ENSDARG00000053813 0 1 - - - - - - - - 1.000 odorant receptor, family F, subfamily 115, member 11 [Source:ZFIN;Acc:ZDB-GENE-070806-12]
10. zgc:162971 ENSDARG00000101093 1 1 - - - - - - - - 1.000 zgc:162971 [Source:ZFIN;Acc:ZDB-GENE-070424-48]
11. MAD2L2 ENSDARG00000042456 0 1 - - - 1.000 - - - - - mitotic arrest deficient 2 like 2 [Source:ZFIN;Acc:ZDB-GENE-050417-61]
12. CU681840.1 CU681840.1 3 1 - - - 1.000 - - - - -
13. si:dkey-285e18.6 ENSDARG00000098144 1 1 - - - - - - - - 1.000 si:dkey-285e18.6 [Source:ZFIN;Acc:ZDB-GENE-120709-86]
14. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - - - 1.000 - - - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
15. ompa ENSDARG00000105218 3 1 - - - 1.000 - - - - - olfactory marker protein a [Source:ZFIN;Acc:ZDB-GENE-050626-118]
16. FP245465.3 FP245465.3 5 1 - - - - - - - - 1.000
17. SNORA62_2 SNORA62_2 4 1 - - - - - - - - 1.000
18. FBXO10_1 FBXO10_1 0 1 - - - 1.000 - - - - -
19. ttll2 ENSDARG00000077853 9 1 - - - - - - - - 1.000 tubulin tyrosine ligase-like family, member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-297]
20. si:ch211-182e10.4 ENSDARG00000070661, ENSDARG00000070757 1 1 - - - 1.000 - - - - - si:ch211-182e10.4 [Source:ZFIN;Acc:ZDB-GENE-041014-76]
21. rhobtb2b ENSDARG00000089340 4 1 - - - 1.000 - - - - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
22. U3_6 U3_6 0 1 - - - - - - - - 1.000
23. cers3b ENSDARG00000036337 1 1 - - - 1.000 - - - - - ceramide synthase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-32]
24. PEG3_16 PEG3_16 0 1 - - - - - - - - 1.000
25. CABZ01084273.1 CABZ01084273.1 16 1 - - - 1.000 - - - - -
26. NWD1 ENSDARG00000076110 3 1 - - - 1.000 - - - - - NACHT and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071116-8]
27. KLHDC8A ENSDARG00000061000 13 1 - - - 1.000 - - - - - kelch domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-120810-3]
28. kcnq3 ENSDARG00000060085 0 1 - - - - - - - - 1.000 potassium voltage-gated channel, KQT-like subfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-301]
29. si:dkey-222f2.3 si:dkey-222f2.3 8 1 - - - 1.000 - - - - -
30. C11H3orf14 C11H3orf14 15 1 - - - 1.000 - - - - -
31. BX324198.1 BX324198.1 12 1 - - - 1.000 - - - - -
32. cabp1b ENSDARG00000033411 2 1 - - - - - - - - 1.000 calcium binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040718-111]
33. PACRG ENSDARG00000087556 7 1 - - - 1.000 - - - - - PARK2 co-regulated [Source:ZFIN;Acc:ZDB-GENE-041114-100]
34. il12a ENSDARG00000038878 3 1 - - - - - - - - 1.000 interleukin 12a [Source:ZFIN;Acc:ZDB-GENE-060724-1]
35. phox2ba ENSDARG00000075330 1 1 - - - - - - - - 1.000 paired-like homeobox 2ba [Source:ZFIN;Acc:ZDB-GENE-090313-51]
36. si:ch73-138e16.7 si:ch73-138e16.7 0 1 - - - - - - - - 1.000
37. si:dkey-233e3.5 si:dkey-233e3.5 7 1 - - - 1.000 - - - - -
38. faah2b ENSDARG00000054786, ENSDARG00000112726 10 1 - - - - - - - - 1.000 fatty acid amide hydrolase 2b [Source:ZFIN;Acc:ZDB-GENE-061027-358]
39. CU075911.1 CU075911.1 2 1 - - - - - - - - 1.000
40. ttll3 ENSDARG00000053728 7 1 - - - - - - - - 1.000 tubulin tyrosine ligase-like family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060616-182]
41. ZNF70_6 ZNF70_6 15 1 - - - 1.000 - - - - -
42. zgc:173708 zgc:173708 2 1 - - - - - - - - 1.000
43. zgc:165423 ENSDARG00000052905 1 1 - - - - - - - - 1.000 zgc:165423 [Source:ZFIN;Acc:ZDB-GENE-070720-11]
44. CT990567.1 ENSDARG00000100384 0 1 - - - - - - - - 1.000
45. CU694226.2 CU694226.2 2 1 - - - - - - - - 1.000
46. si:dkey-14o18.1 si:dkey-14o18.1 108 1 - - - 1.000 - - - - -
47. med8 ENSDARG00000114425 7 1 - - - 1.000 - - - - - mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]
48. CR339051.1 CR339051.1 9 1 - - - 1.000 - - - - -
49. BX465848.1 ENSDARG00000114947 1 1 - - - - - - - - 1.000
50. IMPG2_1 IMPG2_1 2 1 - - - - - - - - 1.000
51. PSMB11 PSMB11 3 1 - - - 1.000 - - - - -
52. C7H10orf112 C7H10orf112 15 1 - - - 1.000 - - - - -
53. FRMD7 ENSDARG00000068958 17 1 - - - 1.000 - - - - - FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
54. CABZ01085626.1 ENSDARG00000117294 8 1 - - - - - - - - 1.000
55. si:ch211-57f7.7 ENSDARG00000093131 8 1 - - - - - - - - 1.000 si:ch211-57f7.7 [Source:ZFIN;Acc:ZDB-GENE-090313-119]
56. armc2 ENSDARG00000022660 3 1 - - - - - - - - 1.000 armadillo repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-041014-7]
57. cyp2j20 ENSDARG00000094057 44 1 - - - - - - - - 1.000 cytochrome P450, family 2, subfamily J, polypeptide 20 [Source:ZFIN;Acc:ZDB-GENE-041210-324]
58. si:dkey-189d19.1 si:dkey-189d19.1 2 1 - - - - - - - - 1.000
59. si:dkeyp-104f11.1 si:dkeyp-104f11.1 1 1 - - - - - - - - 1.000
60. taar14e ENSDARG00000090372, ENSDARG00000112236 0 1 - - - 1.000 - - - - - trace amine associated receptor 14e [Source:ZFIN;Acc:ZDB-GENE-041210-317]
61. SLC6A11 SLC6A11 0 1 - - - - - - - - 1.000
62. or128-8 ENSDARG00000094462 0 1 - - - - - - - - 1.000 odorant receptor, family E, subfamily 128, member 8 [Source:ZFIN;Acc:ZDB-GENE-070806-112]
63. pdha1b ENSDARG00000010555, ENSDARG00000114832 4 1 - - - 1.000 - - - - - pyruvate dehydrogenase E1 alpha 1 subunit b [Source:ZFIN;Acc:ZDB-GENE-040718-96]
64. smarcd3b ENSDARG00000019969 11 1 - - - - - - - - 1.000 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]
65. gpr34b ENSDARG00000002959 0 1 - - - 1.000 - - - - - G protein-coupled receptor 34b [Source:ZFIN;Acc:ZDB-GENE-040823-1]
66. irbp 2 1 - - - - - - - - 1.000 interphotoreceptor retinoid-binding protein, transcript variant X2
67. lhx2a ENSDARG00000037964 3 1 - - - 1.000 - - - - - LIM homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-091118-109]
68. ak7b ENSDARG00000017023 25 1 - - - - - - - - 1.000 adenylate kinase 7b [Source:ZFIN;Acc:ZDB-GENE-050309-170]
69. pi15b ENSDARG00000061292 1 1 - - - 1.000 - - - - - peptidase inhibitor 15b [Source:ZFIN;Acc:ZDB-GENE-070912-590]
70. HELZ2 ENSDARG00000012600 2 1 - - - - - - - - 1.000 helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
71. zgc:136639os zgc:136639os 2 1 - - - - - - - - 1.000
72. Metazoa_SRP_23 Metazoa_SRP_23 3 1 - - - 1.000 - - - - -
73. ATP6V1C2 ENSDARG00000070440 2 1 - - - 1.000 - - - - - ATPase H+ transporting V1 subunit C2 [Source:ZFIN;Acc:ZDB-GENE-131127-65]
74. or110-2 ENSDARG00000091172 1 1 - - - - - - - - 1.000 odorant receptor, family D, subfamily 110, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-76]
75. si:dkey-285e18.5 ENSDARG00000093665 5 1 - - - 1.000 - - - - - si:dkey-285e18.5 [Source:ZFIN;Acc:ZDB-GENE-120703-44]
76. si:ch211-217k17.3 si:ch211-217k17.3 2 1 - - - - - - - - 1.000
77. FP103005.1 ENSDARG00000099852 4 1 - - - 1.000 - - - - -
78. mir30b 4 1 - - - 1.000 - - - - - microRNA 30b
79. v2rl1 ENSDARG00000005942 1 1 - - - - - - - - 1.000 vomeronasal 2 receptor, l1 [Source:ZFIN;Acc:ZDB-GENE-050419-65]
80. pcdh1a4 0 1 - - - 1.000 - - - - - protocadherin 1 alpha 4
81. pcolce2b ENSDARG00000055575 2 1 - - - - - - - - 1.000 procollagen C-endopeptidase enhancer 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1177]
82. elfn2 elfn2 1 1 - - - - - - - - 1.000
83. Metazoa_SRP_5 Metazoa_SRP_5 2 1 - - - - - - - - 1.000
84. si:ch211-222k6.3 ENSDARG00000071578 127 1 - - - 1.000 - - - - - si:ch211-222k6.3 [Source:ZFIN;Acc:ZDB-GENE-050208-567]
85. gria1b ENSDARG00000032714, ENSDARG00000111658 12 1 - - - 1.000 - - - - - glutamate receptor, ionotropic, AMPA 1b [Source:ZFIN;Acc:ZDB-GENE-020125-2]
86. crygm5 ENSDARG00000041179, ENSDARG00000112467 1 1 - - - - - - - - 1.000 crystallin, gamma M5 [Source:ZFIN;Acc:ZDB-GENE-041024-6]
87. si:ch211-286l10.2 si:ch211-286l10.2 1 1 - - - - - - - - 1.000
88. or115-1 ENSDARG00000018521 1 1 - - - - - - - - 1.000 odorant receptor, family F, subfamily 115, member 1 [Source:ZFIN;Acc:ZDB-GENE-010309-2]
89. si:ch211-232m19.4 19 1 - - - 1.000 - - - - - si:ch211-232m19.4
90. si:ch211-232m10.6 ENSDARG00000070931 2 1 - - - 1.000 - - - - - si:ch211-232m10.6 [Source:ZFIN;Acc:ZDB-GENE-060503-879]
91. dcst2 ENSDARG00000088693 1 1 - - - - - - - - 1.000 DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
92. urgcp ENSDARG00000036767 6 1 - - - 1.000 - - - - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
93. si:dkey-61m24.1 0 1 - - - 1.000 - - - - - si:dkey-61m24.1
94. si:ch211-239m17.2 si:ch211-239m17.2 1 1 - - - - - - - - 1.000
95. CT033818.1 CT033818.1 0 1 - - - - - - - - 1.000
96. hbaa1 ENSDARG00000097011 58 1 - - - - - - - - 1.000 hemoglobin, alpha adult 1 [Source:ZFIN;Acc:ZDB-GENE-980526-79]
97. BX119910.11 BX119910.11 3 1 - - - - - - - - 1.000
98. rpgrip1l ENSDARG00000051754 2 1 - - - 1.000 - - - - - RPGRIP1-like [Source:ZFIN;Acc:ZDB-GENE-081104-81]
99. RASSF7 RASSF7 0 1 - - - - - - - - 1.000
100. CABZ01060813.1 CABZ01060813.1 12 1 - - - - - - - - 1.000

There are 172 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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