Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ptprub_1

Gene Name Gene ID Reads Annotation
ptprub_1 ENSDARG00000101081 0 protein tyrosine phosphatase, receptor type, U, b [Source:ZFIN;Acc:ZDB-GENE-030131-7036]










Genes with expression patterns similar to ptprub_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prph2a ENSDARG00000038018 2 2 - - - 1.000 - - - - 1.000 peripherin 2a (retinal degeneration, slow) [Source:ZFIN;Acc:ZDB-GENE-000616-8]
2. si:ch211-209n20.58 si:ch211-209n20.58 1 2 - - - 1.000 - - - - 1.000
3. ptprub_1 ENSDARG00000101081 0 2 - - - 1.000 - - - - 1.000 protein tyrosine phosphatase, receptor type, U, b [Source:ZFIN;Acc:ZDB-GENE-030131-7036]
4. gnrh2 ENSDARG00000044754, ENSDARG00000116186 55 1.728 - - - 0.761 - - - - 0.967 gonadotropin-releasing hormone 2 [Source:ZFIN;Acc:ZDB-GENE-030516-1]
5. med8 ENSDARG00000114425 7 1 - - - 1.000 - - - - - mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]
6. si:dkey-14o18.1 si:dkey-14o18.1 108 1 - - - 1.000 - - - - -
7. si:dkey-189d19.1 si:dkey-189d19.1 2 1 - - - - - - - - 1.000
8. PACRG ENSDARG00000087556 7 1 - - - 1.000 - - - - - PARK2 co-regulated [Source:ZFIN;Acc:ZDB-GENE-041114-100]
9. si:ch73-138e16.7 si:ch73-138e16.7 0 1 - - - - - - - - 1.000
10. CU075911.1 CU075911.1 2 1 - - - - - - - - 1.000
11. zgc:165423 ENSDARG00000052905 1 1 - - - - - - - - 1.000 zgc:165423 [Source:ZFIN;Acc:ZDB-GENE-070720-11]
12. zgc:173708 zgc:173708 2 1 - - - - - - - - 1.000
13. si:ch211-182e10.4 ENSDARG00000070661, ENSDARG00000070757 1 1 - - - 1.000 - - - - - si:ch211-182e10.4 [Source:ZFIN;Acc:ZDB-GENE-041014-76]
14. CABZ01084273.1 CABZ01084273.1 16 1 - - - 1.000 - - - - -
15. KLHDC8A ENSDARG00000061000 13 1 - - - 1.000 - - - - - kelch domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-120810-3]
16. kcnq3 ENSDARG00000060085 0 1 - - - - - - - - 1.000 potassium voltage-gated channel, KQT-like subfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-301]
17. NWD1 ENSDARG00000076110 3 1 - - - 1.000 - - - - - NACHT and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071116-8]
18. U3_6 U3_6 0 1 - - - - - - - - 1.000
19. cers3b ENSDARG00000036337 1 1 - - - 1.000 - - - - - ceramide synthase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-32]
20. cabp1b ENSDARG00000033411 2 1 - - - - - - - - 1.000 calcium binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040718-111]
21. BX324198.1 BX324198.1 12 1 - - - 1.000 - - - - -
22. or115-11 ENSDARG00000053813 0 1 - - - - - - - - 1.000 odorant receptor, family F, subfamily 115, member 11 [Source:ZFIN;Acc:ZDB-GENE-070806-12]
23. CT025771.1 ENSDARG00000117721 13 1 - - - 1.000 - - - - -
24. MAD2L2 ENSDARG00000042456 0 1 - - - 1.000 - - - - - mitotic arrest deficient 2 like 2 [Source:ZFIN;Acc:ZDB-GENE-050417-61]
25. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - - - 1.000 - - - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
26. FP245465.3 FP245465.3 5 1 - - - - - - - - 1.000
27. phc3 ENSDARG00000074604 2 1 - - - - - - - - 1.000 polyhomeotic homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-369]
28. zgc:113307 ENSDARG00000044894 17 1 - - - - - - - - 1.000 zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
29. svopa ENSDARG00000056833 14 1 - - - 1.000 - - - - - SV2 related protein a [Source:ZFIN;Acc:ZDB-GENE-060526-336]
30. zgc:174311 zgc:174311 3 1 - - - - - - - - 1.000
31. si:ch211-231i17.4 ENSDARG00000094903 2 1 - - - - - - - - 1.000 si:ch211-231i17.4 [Source:ZFIN;Acc:ZDB-GENE-110914-104]
32. si:ch211-274k16.4 si:ch211-274k16.4 6 1 - - - 1.000 - - - - -
33. si:dkey-20f20.3 si:dkey-20f20.3 7 1 - - - - - - - - 1.000
34. CABZ01034089.2 CABZ01034089.2 0 1 - - - - - - - - 1.000
35. si:ch211-232m19.4 19 1 - - - 1.000 - - - - - si:ch211-232m19.4
36. si:dkey-61m24.1 0 1 - - - 1.000 - - - - - si:dkey-61m24.1
37. CT033818.1 CT033818.1 0 1 - - - - - - - - 1.000
38. dcst2 ENSDARG00000088693 1 1 - - - - - - - - 1.000 DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
39. urgcp ENSDARG00000036767 6 1 - - - 1.000 - - - - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
40. BX119910.11 BX119910.11 3 1 - - - - - - - - 1.000
41. hbaa1 ENSDARG00000097011 58 1 - - - - - - - - 1.000 hemoglobin, alpha adult 1 [Source:ZFIN;Acc:ZDB-GENE-980526-79]
42. rpgrip1l ENSDARG00000051754 2 1 - - - 1.000 - - - - - RPGRIP1-like [Source:ZFIN;Acc:ZDB-GENE-081104-81]
43. si:ch211-217k17.3 si:ch211-217k17.3 2 1 - - - - - - - - 1.000
44. ATP6V1C2 ENSDARG00000070440 2 1 - - - 1.000 - - - - - ATPase H+ transporting V1 subunit C2 [Source:ZFIN;Acc:ZDB-GENE-131127-65]
45. mir30b 4 1 - - - 1.000 - - - - - microRNA 30b
46. pcdh1a4 0 1 - - - 1.000 - - - - - protocadherin 1 alpha 4
47. pcolce2b ENSDARG00000055575 2 1 - - - - - - - - 1.000 procollagen C-endopeptidase enhancer 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1177]
48. Metazoa_SRP_5 Metazoa_SRP_5 2 1 - - - - - - - - 1.000
49. gria1b ENSDARG00000032714, ENSDARG00000111658 12 1 - - - 1.000 - - - - - glutamate receptor, ionotropic, AMPA 1b [Source:ZFIN;Acc:ZDB-GENE-020125-2]
50. si:ch211-222k6.3 ENSDARG00000071578 127 1 - - - 1.000 - - - - - si:ch211-222k6.3 [Source:ZFIN;Acc:ZDB-GENE-050208-567]
51. or128-8 ENSDARG00000094462 0 1 - - - - - - - - 1.000 odorant receptor, family E, subfamily 128, member 8 [Source:ZFIN;Acc:ZDB-GENE-070806-112]
52. taar14e ENSDARG00000090372, ENSDARG00000112236 0 1 - - - 1.000 - - - - - trace amine associated receptor 14e [Source:ZFIN;Acc:ZDB-GENE-041210-317]
53. pdha1b ENSDARG00000010555, ENSDARG00000114832 4 1 - - - 1.000 - - - - - pyruvate dehydrogenase E1 alpha 1 subunit b [Source:ZFIN;Acc:ZDB-GENE-040718-96]
54. zgc:136639os zgc:136639os 2 1 - - - - - - - - 1.000
55. HELZ2 ENSDARG00000012600 2 1 - - - - - - - - 1.000 helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
56. gpr34b ENSDARG00000002959 0 1 - - - 1.000 - - - - - G protein-coupled receptor 34b [Source:ZFIN;Acc:ZDB-GENE-040823-1]
57. irbp 2 1 - - - - - - - - 1.000 interphotoreceptor retinoid-binding protein, transcript variant X2
58. GARNL3 GARNL3 1 1 - - - - - - - - 1.000
59. fam196ab 2 1 - - - 1.000 - - - - - family with sequence similarity 196, member Ab
60. CU459095.1 CU459095.1 7 1 - - - 1.000 - - - - -
61. C1GALT1_1 C1GALT1_1 1 1 - - - 1.000 - - - - -
62. entpd2a.1 ENSDARG00000035506 14 1 - - - 1.000 - - - - - ectonucleoside triphosphate diphosphohydrolase 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040724-187]
63. ifnphi1 ENSDARG00000025607 6 1 - - - - - - - - 1.000 interferon phi 1 [Source:ZFIN;Acc:ZDB-GENE-030721-3]
64. plscr3a ENSDARG00000093078 7 1 - - - 1.000 - - - - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
65. CU062632.1 ENSDARG00000117236 0 1 - - - 1.000 - - - - - ubiquitin-conjugating enzyme E2O [Source:NCBI gene;Acc:101883975]
66. diaph3 ENSDARG00000090785 16 1 - - - - - - - - 1.000 diaphanous-related formin 3 [Source:ZFIN;Acc:ZDB-GENE-040801-144]
67. lratb 3 1 - - - 1.000 - - - - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
68. CR388413.1 ENSDARG00000100537 1 1 - - - - - - - - 1.000
69. cacna1f cacna1f 1 1 - - - - - - - - 1.000
70. CT027744.3 CT027744.3 5 1 - - - 1.000 - - - - -
71. VWA5A_1 VWA5A_1 6 1 - - - 1.000 - - - - -
72. si:dkeyp-8h3.9 si:dkeyp-8h3.9 3 1 - - - 1.000 - - - - -
73. hsf4 ENSDARG00000013251 5 1 - - - 1.000 - - - - - heat shock transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-050306-18]
74. AC024175.11 AC024175.11 12 1 - - - 1.000 - - - - -
75. CR318593.1_1 CR318593.1_1 8 1 - - - - - - - - 1.000
76. CABZ01067071.1 CABZ01067071.1 0 1 - - - 1.000 - - - - -
77. glsa ENSDARG00000062812 1 1 - - - 1.000 - - - - - glutaminase a [Source:ZFIN;Acc:ZDB-GENE-050204-3]
78. si:dkey-19j7.4 si:dkey-19j7.4 1 1 - - - 1.000 - - - - -
79. abcc13 ENSDARG00000062519 2 1 - - - 1.000 - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 13 [Source:ZFIN;Acc:ZDB-GENE-050517-26]
80. si:ch211-153j24.3 ENSDARG00000068428 0 1 - - - - - - - - 1.000 si:ch211-153j24.3 [Source:ZFIN;Acc:ZDB-GENE-041014-38]
81. RMI2 ENSDARG00000103137 0 1 - - - 1.000 - - - - - RecQ mediated genome instability 2 [Source:ZFIN;Acc:ZDB-GENE-131125-13]
82. AL935296.1 AL935296.1 4 1 - - - - - - - - 1.000
83. si:dkey-33g13.1 si:dkey-33g13.1 3 1 - - - 1.000 - - - - -
84. wfikkn1 ENSDARG00000101364 11 1 - - - 1.000 - - - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2465]
85. CR854855.2 CR854855.2 1 1 - - - - - - - - 1.000
86. si:dkey-34f9.3 ENSDARG00000077813 3 1 - - - 1.000 - - - - - si:dkey-34f9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-410]
87. or137-8 ENSDARG00000105705 1 1 - - - - - - - - 1.000 odorant receptor, family H, subfamily 137, member 8 [Source:ZFIN;Acc:ZDB-GENE-070806-28]
88. si:ch211-120e1.7 ENSDARG00000094634 14 1 - - - 1.000 - - - - - si:ch211-120e1.7 [Source:ZFIN;Acc:ZDB-GENE-070424-119]
89. CENPQ 8 1 - - - 1.000 - - - - - centromere protein Q
90. nitr1l 0 1 - - - - - - - - 1.000 novel immune-type receptor 1l, transcript variant X2
91. mespaa ENSDARG00000017078, ENSDARG00000114890 0 1 - - - 1.000 - - - - - mesoderm posterior aa [Source:ZFIN;Acc:ZDB-GENE-000406-8]
92. fam113 ENSDARG00000002685 0 1 - - - - - - - - 1.000 family with sequence similarity 113 [Source:ZFIN;Acc:ZDB-GENE-041212-23]
93. ZNF70 ZNF70 2 1 - - - - - - - - 1.000
94. fhit ENSDARG00000078195 0 1 - - - - - - - - 1.000 fragile histidine triad gene [Source:ZFIN;Acc:ZDB-GENE-040426-1703]
95. CR792453.3 ENSDARG00000110328 5 1 - - - - - - - - 1.000 uncharacterized LOC110438862 [Source:NCBI gene;Acc:110438862]
96. or128-1 ENSDARG00000105730 1 1 - - - - - - - - 1.000 odorant receptor, family E, subfamily 128, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-106]
97. ENSDARG00000088134 ENSDARG00000088134 16 1 - - - 1.000 - - - - -
98. si:dkey-71l1.1 ENSDARG00000052411 11 1 - - - - - - - - 1.000 si:dkey-71l1.1 [Source:ZFIN;Acc:ZDB-GENE-070705-489]
99. CABZ01067072.1 CABZ01067072.1 17 1 - - - 1.000 - - - - -
100. CT573356.3 CT573356.3 2 1 - - - - - - - - 1.000

There are 172 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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