Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ptpn3

Gene Name Gene ID Reads Annotation
ptpn3 ENSDARG00000055784 436 protein tyrosine phosphatase, non-receptor type 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2934]










Genes with expression patterns similar to ptpn3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptpn3 ENSDARG00000055784 436 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein tyrosine phosphatase, non-receptor type 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2934]
2. mogat3b ENSDARG00000003635 394 1.718 - 0.950 - - - - 0.768 - - monoacylglycerol O-acyltransferase 3b [Source:ZFIN;Acc:ZDB-GENE-110302-2]
3. SP6 ENSDARG00000099880, ENSDARG00000110548 665 1.709 - - - - - 0.832 - 0.877 - Sp6 transcription factor [Source:ZFIN;Acc:ZDB-GENE-040426-1824]
4. ttpal ENSDARG00000070644, ENSDARG00000112925 471 1.698 - 0.938 - - - - 0.760 - - tocopherol (alpha) transfer protein-like [Source:ZFIN;Acc:ZDB-GENE-030131-296]
5. si:dkeyp-52c3.2 ENSDARG00000070516 92 1.684 0.701 0.983 - - - - - - - si:dkeyp-52c3.2 [Source:ZFIN;Acc:ZDB-GENE-110411-46]
6. FP236168.1 FP236168.1 150 1.66 - 0.942 - - - - - - 0.718
7. tfe3b ENSDARG00000019457, ENSDARG00000111231 507 1.65 0.847 0.803 - - - - - - - transcription factor binding to IGHM enhancer 3b [Source:ZFIN;Acc:ZDB-GENE-010919-3]
8. GDPD2 ENSDARG00000073870 229 1.646 - 0.867 - - - - 0.779 - - glycerophosphodiester phosphodiesterase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081107-62]
9. QPCT ENSDARG00000089717 1383 1.643 - - - - - - - 0.866 0.777 glutaminyl-peptide cyclotransferase [Source:ZFIN;Acc:ZDB-GENE-130827-1]
10. slc10a3 ENSDARG00000103220 30 1.634 0.874 - - - - - 0.760 - - solute carrier family 10, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2347]
11. SON SON 510 1.625 - 0.854 - - - 0.771 - - -
12. itih5 ENSDARG00000045517 374 1.621 - - - - - - - 0.912 0.709 inter-alpha-trypsin inhibitor heavy chain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-041210-193]
13. spata6l ENSDARG00000004874 149 1.602 0.790 - - - - - - - 0.812 spermatogenesis associated 6-like [Source:ZFIN;Acc:ZDB-GENE-040426-1369]
14. arhgap4a ENSDARG00000039265 181 1.601 - 0.891 - - - - - - 0.710 Rho GTPase activating protein 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1229]
15. ppcdc ENSDARG00000033020, ENSDARG00000109858 563 1.598 - 0.864 - - - - 0.734 - - phosphopantothenoylcysteine decarboxylase [Source:ZFIN;Acc:ZDB-GENE-040426-1749]
16. MIIP ENSDARG00000088346 382 1.578 - 0.849 - - - - 0.729 - - migration and invasion inhibitory protein [Source:ZFIN;Acc:ZDB-GENE-130620-1]
17. qpctla ENSDARG00000061691 869 1.567 - 0.837 - - - - 0.730 - - glutaminyl-peptide cyclotransferase-like a [Source:ZFIN;Acc:ZDB-GENE-030131-1441]
18. elmod2 ENSDARG00000101669 3101 1.553 - 0.851 - - - - 0.702 - - ELMO/CED-12 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060824-2]
19. dlx3b ENSDARG00000014626 3647 1.543 - 0.813 - - - 0.730 - - - distal-less homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-980526-280]
20. xpc ENSDARG00000039754 515 1.54 0.810 - - - - - 0.730 - - xeroderma pigmentosum, complementation group C [Source:ZFIN;Acc:ZDB-GENE-030131-8461]
21. zgc:110269 ENSDARG00000012325 691 1.539 - 0.824 - - - - - - 0.715 zgc:110269 [Source:ZFIN;Acc:ZDB-GENE-050417-81]
22. atp2c1 ENSDARG00000060197 273 1.537 - 0.758 - - - - - - 0.779 ATPase secretory pathway Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-060503-615]
23. hapln3 ENSDARG00000045802, ENSDARG00000116387 2242 1.526 - - - - - 0.774 - 0.752 - hyaluronan and proteoglycan link protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2089]
24. col4a4 ENSDARG00000002831 803 1.52 - - - - - 0.771 - - 0.749 collagen, type IV, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-101001-1]
25. pls3 ENSDARG00000037655 5175 1.518 - 0.797 - - - - 0.721 - - plastin 3 (T isoform) [Source:ZFIN;Acc:ZDB-GENE-040718-10]
26. fam43a ENSDARG00000043009 792 1.495 0.740 - - - - - 0.755 - - family with sequence similarity 43, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6098]
27. RAB11FIP5 RAB11FIP5 626 1.49 - 0.771 - - - - - - 0.719
28. gosr1 ENSDARG00000026654, ENSDARG00000113670, ENSDARG00000113785 588 1.488 - 0.749 - - - - 0.739 - - golgi SNAP receptor complex member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-133]
29. rcn1 ENSDARG00000070006 8455 1.487 - - - - - - - 0.768 0.719 reticulocalbin 1, EF-hand calcium binding domain [Source:ZFIN;Acc:ZDB-GENE-080225-33]
30. mpdu1a ENSDARG00000035562, ENSDARG00000109966 1169 1.48 0.734 - - - - 0.746 - - - mannose-P-dolichol utilization defect 1a [Source:ZFIN;Acc:ZDB-GENE-040912-9]
31. mmp2 ENSDARG00000017676 2347 1.478 - - - - - 0.714 0.764 - - matrix metallopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9123]
32. prg4b ENSDARG00000028163 306 1.477 - 0.705 - - - - 0.772 - - proteoglycan 4b [Source:ZFIN;Acc:ZDB-GENE-041014-324]
33. HHIPL2 ENSDARG00000060008 162 1.475 - - 0.733 - - - - 0.742 - HHIP-like 2 [Source:ZFIN;Acc:ZDB-GENE-131120-145]
34. CU929133.1 CU929133.1 94 1.474 - - - - - - 0.718 0.756 -
35. agrp ENSDARG00000069089, ENSDARG00000116610 533 1.474 - - - - - 0.709 0.765 - - agouti related neuropeptide [Source:ZFIN;Acc:ZDB-GENE-040817-1]
36. ecm2 ENSDARG00000071549 1527 1.472 - - - - - 0.728 - - 0.744 extracellular matrix protein 2, female organ and adipocyte specific [Source:ZFIN;Acc:ZDB-GENE-050208-651]
37. hs3st3b1a ENSDARG00000099149, ENSDARG00000113644 443 1.466 - - - - - - 0.701 0.765 - heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1a [Source:ZFIN;Acc:ZDB-GENE-070202-4]
38. zgc:136870 ENSDARG00000054837, ENSDARG00000109282 201 1.462 - - - - - 0.735 0.727 - - zgc:136870 [Source:ZFIN;Acc:ZDB-GENE-060312-1]
39. si:dkey-27i16.3 si:dkey-27i16.3 494 1.456 - - - - - - 0.714 0.742 -
40. MUM1L1 MUM1L1 968 1.45 - 0.703 - - - - 0.747 - -
41. htra1b ENSDARG00000014907 146 1.449 - - - - - - 0.715 0.734 - HtrA serine peptidase 1b [Source:ZFIN;Acc:ZDB-GENE-080219-7]
42. FBXO46 ENSDARG00000099814 722 1.425 0.719 - - - - - - - 0.706 F-box protein 46 [Source:HGNC Symbol;Acc:HGNC:25069]
43. pcp4b 1080 0.99 - 0.990 - - - - - - - Purkinje cell protein 4b
44. six3a ENSDARG00000058008, ENSDARG00000114971 586 0.988 - 0.988 - - - - - - - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
45. si:dkey-10g2.5 si:dkey-10g2.5 72 0.986 - 0.986 - - - - - - -
46. pcdh1b ENSDARG00000036175 101 0.981 - 0.981 - - - - - - - protocadherin 1b [Source:ZFIN;Acc:ZDB-GENE-091015-2]
47. entpd2a.2 ENSDARG00000033953 389 0.981 - 0.981 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 2a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040724-67]
48. si:ch211-13o20.3 si:ch211-13o20.3 113 0.98 - 0.980 - - - - - - -
49. si:dkey-52k20.13 si:dkey-52k20.13 428 0.978 - 0.978 - - - - - - -
50. TC2N ENSDARG00000095067 146 0.977 - 0.977 - - - - - - - tandem C2 domains, nuclear [Source:HGNC Symbol;Acc:HGNC:19859]
51. gng8 ENSDARG00000042970 117 0.977 - 0.977 - - - - - - - guanine nucleotide binding protein (G protein), gamma 8 [Source:ZFIN;Acc:ZDB-GENE-050522-312]
52. GPR97 GPR97 9 0.976 - 0.976 - - - - - - -
53. tmprss13a ENSDARG00000100969 84 0.976 - 0.976 - - - - - - - transmembrane serine protease 13a [Source:ZFIN;Acc:ZDB-GENE-090309-3]
54. zgc:92326 zgc:92326 94 0.976 - 0.976 - - - - - - -
55. tirap ENSDARG00000074371 10 0.976 - 0.976 - - - - - - - toll-interleukin 1 receptor (TIR) domain containing adaptor protein [Source:ZFIN;Acc:ZDB-GENE-040219-4]
56. stk38l ENSDARG00000045482 266 0.976 - 0.976 - - - - - - - serine/threonine kinase 38 like [Source:ZFIN;Acc:ZDB-GENE-040426-798]
57. sdk1a ENSDARG00000078866 159 0.976 - 0.976 - - - - - - - sidekick cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-081104-374]
58. elavl2 ENSDARG00000040732 44 0.976 - 0.976 - - - - - - - ELAV like neuron-specific RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040704-9]
59. CU929163.1 CU929163.1 11 0.976 - 0.976 - - - - - - -
60. si:ch211-236p5.2 ENSDARG00000086256 8 0.976 - 0.976 - - - - - - - si:ch211-236p5.2 [Source:ZFIN;Acc:ZDB-GENE-081028-33]
61. klhdc8b ENSDARG00000090787 33 0.976 - 0.976 - - - - - - - kelch domain containing 8B [Source:ZFIN;Acc:ZDB-GENE-090313-174]
62. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 0.976 - 0.976 - - - - - - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
63. si:ch211-227e10.1 ENSDARG00000103197, ENSDARG00000104968 6 0.976 - 0.976 - - - - - - - si:ch211-227e10.1 [Source:ZFIN;Acc:ZDB-GENE-050420-221]
64. si:dkey-173l11.3 si:dkey-173l11.3 14 0.976 - 0.976 - - - - - - -
65. CABZ01081656.1 CABZ01081656.1 14 0.976 - 0.976 - - - - - - -
66. si:dkey-192i18.3 si:dkey-192i18.3 47 0.976 - 0.976 - - - - - - -
67. si:ch211-284e13.4 ENSDARG00000060330 6 0.976 - 0.976 - - - - - - - si:ch211-284e13.4 [Source:ZFIN;Acc:ZDB-GENE-060526-161]
68. grip2b ENSDARG00000027618 9 0.976 - 0.976 - - - - - - - glutamate receptor interacting protein 2b [Source:ZFIN;Acc:ZDB-GENE-070705-172]
69. BX004816.4 BX004816.4 33 0.976 - 0.976 - - - - - - -
70. dio2 ENSDARG00000094857 17 0.976 - 0.976 - - - - - - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
71. si:ch211-255g12.8 ENSDARG00000069627 22 0.976 - 0.976 - - - - - - - si:ch211-255g12.8 [Source:ZFIN;Acc:ZDB-GENE-081104-39]
72. zgc:112234_2 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 33 0.976 - 0.976 - - - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
73. dpt ENSDARG00000056178 7 0.976 - 0.976 - - - - - - - dermatopontin [Source:ZFIN;Acc:ZDB-GENE-060312-9]
74. slc43a3b ENSDARG00000057949 194 0.976 - 0.976 - - - - - - - solute carrier family 43, member 3b [Source:ZFIN;Acc:ZDB-GENE-060312-28]
75. GFRAL ENSDARG00000089709 167 0.976 - 0.976 - - - - - - - GDNF family receptor alpha like [Source:ZFIN;Acc:ZDB-GENE-110607-2]
76. SNORA53 SNORA53 10 0.976 - 0.976 - - - - - - -
77. si:ch1073-228j22.1 ENSDARG00000095799 98 0.975 - 0.975 - - - - - - - si:ch1073-228j22.1 [Source:ZFIN;Acc:ZDB-GENE-110411-219]
78. wdyhv1 ENSDARG00000070403 42 0.975 - 0.975 - - - - - - - WDYHV motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-848]
79. btbd9 ENSDARG00000068983 356 0.975 - 0.975 - - - - - - - BTB (POZ) domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-040704-39]
80. CR354432.1 CR354432.1 424 0.974 - 0.974 - - - - - - -
81. C17H2orf43 C17H2orf43 379 0.974 - 0.974 - - - - - - -
82. zgc:171779 ENSDARG00000016908 26 0.972 - 0.972 - - - - - - - zgc:171779 [Source:ZFIN;Acc:ZDB-GENE-071004-38]
83. ccl25b ENSDARG00000070873 454 0.971 - 0.971 - - - - - - - chemokine (C-C motif) ligand 25b [Source:ZFIN;Acc:ZDB-GENE-110222-2]
84. CU855953.1 CU855953.1 137 0.97 - 0.970 - - - - - - -
85. samd10a ENSDARG00000079978, ENSDARG00000112138 430 0.97 - 0.970 - - - - - - - sterile alpha motif domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-080204-53]
86. acaa1 ENSDARG00000004687 557 0.97 - 0.970 - - - - - - - acetyl-CoA acyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-48]
87. cdx1a ENSDARG00000114554 28 0.969 - 0.969 - - - - - - - caudal type homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050510-1]
88. zgc:152938 ENSDARG00000102586 97 0.967 - 0.967 - - - - - - - zgc:152938 [Source:ZFIN;Acc:ZDB-GENE-061013-458]
89. plekha7a ENSDARG00000060813 179 0.967 - 0.967 - - - - - - - pleckstrin homology domain containing, family A member 7a [Source:ZFIN;Acc:ZDB-GENE-050419-75]
90. si:ch211-279m15.1 si:ch211-279m15.1 67 0.965 - 0.965 - - - - - - -
91. itsn1 ENSDARG00000000086 684 0.965 - 0.965 - - - - - - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
92. slc6a13l 121 0.963 - 0.963 - - - - - - - solute carrier family 6 (neurotransmitter transporter, GABA), member 13 like, transcript variant X2
93. kat6a ENSDARG00000018907 250 0.963 - 0.963 - - - - - - - K(lysine) acetyltransferase 6A [Source:ZFIN;Acc:ZDB-GENE-021022-3]
94. ddrgk1_1 ENSDARG00000037172 1563 0.963 - 0.963 - - - - - - - DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
95. dnajb9b ENSDARG00000016886 270 0.962 - 0.962 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 9b [Source:ZFIN;Acc:ZDB-GENE-050522-76]
96. SLC22A15 ENSDARG00000055445 111 0.962 - 0.962 - - - - - - - solute carrier family 22, member 15 [Source:ZFIN;Acc:ZDB-GENE-070928-5]
97. abcb8 ENSDARG00000056672 589 0.961 - 0.961 - - - - - - - ATP-binding cassette, sub-family B (MDR/TAP), member 8 [Source:ZFIN;Acc:ZDB-GENE-050410-6]
98. caprin2 ENSDARG00000020749 39 0.961 - 0.961 - - - - - - - caprin family member 2 [Source:ZFIN;Acc:ZDB-GENE-040812-2]
99. cry1b cry1b 152 0.96 - 0.960 - - - - - - -
100. mettl6 ENSDARG00000070085 366 0.96 - 0.960 - - - - - - - methyltransferase like 6 [Source:ZFIN;Acc:ZDB-GENE-040426-926]

There are 926 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA