Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ptchd4

Gene Name Gene ID Reads Annotation
ptchd4 ENSDARG00000008249 17 patched domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041001-178]










Genes with expression patterns similar to ptchd4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptchd4 ENSDARG00000008249 17 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 patched domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041001-178]
2. NSUN6 ENSDARG00000103478 29 2.7 0.823 0.877 - - - - 1.000 - - NOL1/NOP2/Sun domain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-080808-8]
3. si:ch211-132b12.7 ENSDARG00000068374 30 2 1.000 - - - - - 1.000 - - si:ch211-132b12.7 [Source:ZFIN;Acc:ZDB-GENE-050419-250]
4. si:dkey-122c11.4 si:dkey-122c11.4 13 2 1.000 - - - - - 1.000 - -
5. scd ENSDARG00000033662 146 2 1.000 - - - - - 1.000 - - stearoyl-CoA desaturase (delta-9-desaturase) [Source:ZFIN;Acc:ZDB-GENE-031106-3]
6. CR936540.2 CR936540.2 4 2 1.000 - - - - - 1.000 - -
7. ftr14l ENSDARG00000078254 2 2 1.000 - - - - - 1.000 - - finTRIM family, member 14-like [Source:ZFIN;Acc:ZDB-GENE-090312-123]
8. GPR22_1 GPR22_1 28 2 1.000 - - - - - 1.000 - -
9. tecrl2 tecrl2 11 2 1.000 - - - - - 1.000 - -
10. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 1.96 1.000 - - - - - 0.960 - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
11. slco4a1 ENSDARG00000075948 74 1.932 - 0.932 - - - - 1.000 - - solute carrier organic anion transporter family, member 4A1 [Source:ZFIN;Acc:ZDB-GENE-060606-4]
12. CR848784.2 ENSDARG00000111157 16 1.92 1.000 0.920 - - - - - - -
13. CYP46A1 CYP46A1 16 1.919 - 0.919 - - - - 1.000 - -
14. p2rx3a ENSDARG00000010477, ENSDARG00000115270 6 1.919 1.000 0.919 - - - - - - - purinergic receptor P2X, ligand-gated ion channel, 3a [Source:ZFIN;Acc:ZDB-GENE-000427-3]
15. nrg2b ENSDARG00000086585 100 1.919 - 0.919 - - - - 1.000 - - neuregulin 2b [Source:ZFIN;Acc:ZDB-GENE-090205-2]
16. si:ch211-120c15.3 ENSDARG00000101807 19 1.916 0.916 - - - - - 1.000 - - si:ch211-120c15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-99]
17. golim4a ENSDARG00000100977, ENSDARG00000106760, ENSDARG00000113393 144 1.912 - 0.912 - - - - 1.000 - - golgi integral membrane protein 4a [Source:ZFIN;Acc:ZDB-GENE-041026-2]
18. CCDC96 ENSDARG00000035963 5 1.905 - - - - 0.905 - 1.000 - - coiled-coil domain containing 96 [Source:ZFIN;Acc:ZDB-GENE-081022-156]
19. prelp ENSDARG00000070597 99 1.905 1.000 - - - 0.905 - - - - proline/arginine-rich end leucine-rich repeat protein [Source:ZFIN;Acc:ZDB-GENE-080327-24]
20. FGFBP3 FGFBP3 993 1.901 1.000 - - - - - 0.901 - -
21. gria4a ENSDARG00000037496 88 1.899 0.914 - - - - - 0.985 - - glutamate receptor, ionotropic, AMPA 4a [Source:ZFIN;Acc:ZDB-GENE-020125-7]
22. entpd3 ENSDARG00000035309 263 1.875 0.875 - - - - - 1.000 - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]
23. CABZ01063077.1 CABZ01063077.1 22 1.875 0.952 - - - - - 0.923 - -
24. mkks ENSDARG00000016139 70 1.871 0.871 - - - - - 1.000 - - McKusick-Kaufman syndrome [Source:ZFIN;Acc:ZDB-GENE-040426-757]
25. phactr3a ENSDARG00000058243 150 1.84 0.871 0.969 - - - - - - - phosphatase and actin regulator 3a [Source:ZFIN;Acc:ZDB-GENE-080220-4]
26. paqr7a ENSDARG00000100462 15 1.84 1.000 0.840 - - - - - - - progestin and adipoQ receptor family member VII, a [Source:ZFIN;Acc:ZDB-GENE-070705-346]
27. fbxl3b ENSDARG00000021882 58 1.825 - 0.825 - - - - 1.000 - - F-box and leucine-rich repeat protein 3b [Source:ZFIN;Acc:ZDB-GENE-041010-178]
28. si:ch211-202h22.9 ENSDARG00000079980 2 1.824 - 0.919 - - 0.905 - - - - si:ch211-202h22.9 [Source:ZFIN;Acc:ZDB-GENE-030131-1143]
29. SH3TC1 ENSDARG00000077330 8 1.824 - 0.919 - - 0.905 - - - - SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
30. nmu ENSDARG00000043299 67 1.823 0.823 - - - - - 1.000 - - neuromedin U [Source:ZFIN;Acc:ZDB-GENE-041001-111]
31. si:ch211-162i8.4 ENSDARG00000087168, ENSDARG00000094484 69 1.821 - 0.898 - - - - 0.923 - - si:ch211-162i8.4 [Source:ZFIN;Acc:ZDB-GENE-110914-48]
32. KCNB1 ENSDARG00000060095, ENSDARG00000112775 5 1.799 - - 0.799 - - - 1.000 - - potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3]
33. adgra1a ENSDARG00000054177 19 1.793 - - - - 0.793 - 1.000 - - adhesion G protein-coupled receptor A1a [Source:ZFIN;Acc:ZDB-GENE-130603-101]
34. CHD6 ENSDARG00000017244 219 1.791 0.791 - - - - - 1.000 - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
35. tlx2 ENSDARG00000011273 870 1.777 - 0.903 - - - - 0.874 - - T cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020208-1]
36. si:dkey-154b15.1 ENSDARG00000057010 85 1.777 - 0.777 - - - - 1.000 - - si:dkey-154b15.1 [Source:ZFIN;Acc:ZDB-GENE-060503-52]
37. GRM8_1 GRM8_1 85 1.776 1.000 - - - - - 0.776 - -
38. dnm1a ENSDARG00000010042 43 1.766 - - 0.766 - - - 1.000 - - dynamin 1a [Source:ZFIN;Acc:ZDB-GENE-081104-27]
39. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 1.765 - 0.871 - - - - 0.894 - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
40. calb2a ENSDARG00000041062, ENSDARG00000110220 459 1.763 0.911 - - - - - 0.852 - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
41. CABZ01081748.1 ENSDARG00000102139 31 1.759 1.000 - - - - 0.759 - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
42. ntrk3b ENSDARG00000086214 1 1.754 - - 0.754 - - - 1.000 - - neurotrophic tyrosine kinase, receptor, type 3b [Source:ZFIN;Acc:ZDB-GENE-010126-4]
43. ANKRD13D ENSDARG00000098140 88 1.752 0.823 - - - - - 0.929 - - ankyrin repeat domain 13 family, member D [Source:ZFIN;Acc:ZDB-GENE-101007-3]
44. uvrag ENSDARG00000023815 424 1.751 0.870 0.881 - - - - - - - UV radiation resistance associated gene [Source:ZFIN;Acc:ZDB-GENE-040426-924]
45. slc8a4a ENSDARG00000055154 90 1.748 0.946 - - - - - 0.802 - - solute carrier family 8 (sodium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-060110-2]
46. mtf2 ENSDARG00000005590 82 1.746 - - - - - 0.746 1.000 - - metal response element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-060512-94]
47. zgc:110434_1 30 1.744 0.871 0.873 - - - - - - - zgc:110434
48. inpp5e ENSDARG00000103926 567 1.728 0.934 0.794 - - - - - - - inositol polyphosphate-5-phosphatase E [Source:ZFIN;Acc:ZDB-GENE-050809-23]
49. SACS ENSDARG00000091042 15 1.728 - - - - - 0.728 1.000 - - sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
50. ntng2a ENSDARG00000077367 43 1.723 0.723 - - - - - 1.000 - - netrin g2a [Source:ZFIN;Acc:ZDB-GENE-081105-186]
51. nebl ENSDARG00000021200 40 1.723 0.723 - - - - - 1.000 - - nebulette [Source:ZFIN;Acc:ZDB-GENE-050320-151]
52. si:dkey-238f9.1 ENSDARG00000079446 51 1.715 0.871 - - - - - 0.844 - - si:dkey-238f9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-297]
53. mir34 176 1.712 - 0.821 - - - - 0.891 - - microRNA 34
54. bmp3 ENSDARG00000060526, ENSDARG00000109238 54 1.696 - 0.743 - - 0.953 - - - - bone morphogenetic protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7192]
55. cd247l ENSDARG00000077240 25 1.664 - - - - 0.905 0.759 - - - CD247 antigen like [Source:ZFIN;Acc:ZDB-GENE-070508-2]
56. ctssa ctssa 24 1.664 - - - - 0.905 0.759 - - -
57. si:ch211-66k16.28 ENSDARG00000088423 80 1.658 - 0.899 - - - 0.759 - - - si:ch211-66k16.28 [Source:ZFIN;Acc:ZDB-GENE-120709-59]
58. stxbp5a ENSDARG00000002656 318 1.644 0.786 - - - - - 0.858 - - syntaxin binding protein 5a (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-041001-161]
59. rnf165a ENSDARG00000077906 133 1.637 0.793 - - - - - 0.844 - - ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
60. P2RY1 ENSDARG00000105281 45 1.636 0.905 - - - - - 0.731 - - purinergic receptor P2Y1 [Source:ZFIN;Acc:ZDB-GENE-121004-2]
61. tmem150c ENSDARG00000069590 94 1.622 - - 0.784 - - - 0.838 - - transmembrane protein 150C [Source:ZFIN;Acc:ZDB-GENE-090112-5]
62. xrra1 ENSDARG00000089578 18 1.614 - 0.855 - - - 0.759 - - - X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]
63. lrrn3 lrrn3 137 1.609 0.815 - - - - - 0.794 - -
64. nlgn3b ENSDARG00000062376 171 1.606 0.823 - - - - - 0.783 - - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
65. ZNF512B ENSDARG00000071055 7 1.605 - - 0.846 - - 0.759 - - - zinc finger protein 512B [Source:HGNC Symbol;Acc:HGNC:29212]
66. ap3m2 ENSDARG00000016128 851 1.597 - 0.850 - - - - 0.747 - - adaptor related protein complex 3 subunit mu 2 [Source:ZFIN;Acc:ZDB-GENE-021022-2]
67. KLHL14 ENSDARG00000045275 155 1.59 0.773 - - - - - 0.817 - - kelch-like family member 14 [Source:ZFIN;Acc:ZDB-GENE-091204-223]
68. rd3 ENSDARG00000031600 1085 1.588 0.863 - - - - - 0.725 - - retinal degeneration 3, GUCY2D regulator [Source:ZFIN;Acc:ZDB-GENE-040724-103]
69. napg napg 645 1.584 - 0.836 - - - - 0.748 - -
70. si:dkey-93n13.2 ENSDARG00000092816 119 1.572 0.778 - - - - - 0.794 - - si:dkey-93n13.2 [Source:ZFIN;Acc:ZDB-GENE-091204-177]
71. PDZD4 ENSDARG00000090564 131 1.567 0.765 - - - - - 0.802 - - PDZ domain containing 4 [Source:HGNC Symbol;Acc:HGNC:21167]
72. MAP4K2 ENSDARG00000001234 39 1.565 - 0.806 - - - 0.759 - - - mitogen-activated protein kinase kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030616-163]
73. APBB3 ENSDARG00000053771 654 1.557 - 0.835 - - - - 0.722 - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
74. slc5a6 slc5a6 224 1.555 - 0.841 - - - 0.714 - - -
75. syn1 ENSDARG00000060368, ENSDARG00000111164 397 1.554 0.702 - - - - - 0.852 - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
76. pcdh18a ENSDARG00000089805 1096 1.519 0.722 - - - - - 0.797 - - protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
77. DOCK4 DOCK4 78 1.517 0.741 - - - - - 0.776 - -
78. TRIM14_5 TRIM14_5 2 1.513 - - 0.754 - - 0.759 - - -
79. nif3l1 ENSDARG00000045249 28 1.51 - - - - 0.751 0.759 - - - NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050706-80]
80. ptpn5 ENSDARG00000074866 548 1.483 0.704 - - - - - 0.779 - - protein tyrosine phosphatase, non-receptor type 5 [Source:ZFIN;Acc:ZDB-GENE-101028-3]
81. SLC35D3 ENSDARG00000107442 12 1.48 - - 0.704 - - - 0.776 - - solute carrier family 35 member D3 [Source:HGNC Symbol;Acc:HGNC:15621]
82. atp11a ENSDARG00000008413 742 1.478 0.718 0.760 - - - - - - - ATPase phospholipid transporting 11A [Source:ZFIN;Acc:ZDB-GENE-090311-52]
83. MYOF ENSDARG00000006112 436 1.477 0.729 0.748 - - - - - - - myoferlin [Source:ZFIN;Acc:ZDB-GENE-040426-1138]
84. C25H15orf27 C25H15orf27 69 1.477 0.713 - - - - - 0.764 - -
85. si:dkeyp-33e11.2 si:dkeyp-33e11.2 232 1.448 0.726 - - - - - 0.722 - -
86. si:ch73-111m19.2 ENSDARG00000003077 43 1 - - - - - - 1.000 - - si:ch73-111m19.2 [Source:ZFIN;Acc:ZDB-GENE-130603-13]
87. ENSDARG00000089152 ENSDARG00000089152 12 1 - - - - - - 1.000 - -
88. si:dkey-121b10.8 si:dkey-121b10.8 3 1 - - - - - - 1.000 - -
89. scn1a_2 1 1 1.000 - - - - - - - - sodium channel, voltage-gated, type I, alpha, transcript variant X1
90. cradd ENSDARG00000028192 153 1 1.000 - - - - - - - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:ZFIN;Acc:ZDB-GENE-041010-168]
91. ankrd29 ENSDARG00000057159, ENSDARG00000112325 64 1 - - - - - - 1.000 - - ankyrin repeat domain 29 [Source:ZFIN;Acc:ZDB-GENE-050208-655]
92. xdh ENSDARG00000055240 250 1 1.000 - - - - - - - - xanthine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070719-9]
93. taok3b ENSDARG00000094052 36 1 - - - - - - 1.000 - - TAO kinase 3b [Source:ZFIN;Acc:ZDB-GENE-060526-59]
94. KLHL35 ENSDARG00000063577 77 1 1.000 - - - - - - - - kelch-like family member 35 [Source:ZFIN;Acc:ZDB-GENE-091118-66]
95. ACAP2 ENSDARG00000060783 9 1 - - - - - - 1.000 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-050208-640]
96. l3mbtl1a ENSDARG00000014828 119 1 - - - - - - 1.000 - - l(3)mbt-like 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090312-120]
97. mir124-6 64 1 - - - - - - 1.000 - - microRNA 124-6
98. LPHN2_1 LPHN2_1 3 1 - - - - - - 1.000 - -
99. si:ch73-91k6.1 18 1 - - - - - - 1.000 - - si:ch73-91k6.1
100. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1 1.000 - - - - - - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]

There are 1767 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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