Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for prkra

Gene Name Gene ID Reads Annotation
prkra ENSDARG00000076718 606 protein kinase, interferon-inducible double stranded RNA dependent activator [Source:ZFIN;Acc:ZDB-GENE-050309-206]










Genes with expression patterns similar to prkra

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prkra ENSDARG00000076718 606 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein kinase, interferon-inducible double stranded RNA dependent activator [Source:ZFIN;Acc:ZDB-GENE-050309-206]
2. ripk4 ENSDARG00000043211 775 2.991 - - - 0.721 - 0.730 - 0.700 0.840 receptor-interacting serine-threonine kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2042]
3. arhgef16 ENSDARG00000077114 759 2.535 0.729 0.910 - - - - - 0.896 - Rho guanine nucleotide exchange factor (GEF) 16 [Source:ZFIN;Acc:ZDB-GENE-081104-446]
4. hsd3b7 ENSDARG00000036966, ENSDARG00000111892, ENSDARG00000114115 797 1.878 - - - 0.893 - - - - 0.985 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase [Source:ZFIN;Acc:ZDB-GENE-030131-5673]
5. HIP1R HIP1R 490 1.864 - 0.881 - - - - - - 0.983
6. hbegfa ENSDARG00000075121 1865 1.852 - - - 0.909 - - - - 0.943 heparin-binding EGF-like growth factor a [Source:ZFIN;Acc:ZDB-GENE-080204-119]
7. coil ENSDARG00000040070 863 1.834 - 0.844 - - - - - - 0.990 coilin p80 [Source:ZFIN;Acc:ZDB-GENE-000330-8]
8. THEM4 ENSDARG00000061621 364 1.83 - - - 0.842 - - - - 0.988 thioesterase superfamily member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-982]
9. itpkb ENSDARG00000010059 2352 1.818 - 0.878 - - - - - - 0.940 inositol-trisphosphate 3-kinase B [Source:ZFIN;Acc:ZDB-GENE-041014-166]
10. dlx2b ENSDARG00000017174, ENSDARG00000116017 580 1.81 - - - 0.866 - - - - 0.944 distal-less homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-18]
11. wdr37 ENSDARG00000074611 468 1.799 - 0.977 - 0.822 - - - - - WD repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-030131-8101]
12. tmem194a tmem194a 745 1.792 - 0.891 - 0.901 - - - - -
13. gltpd1 gltpd1 377 1.787 - 0.883 - 0.904 - - - - -
14. ints10 ENSDARG00000043031 455 1.763 - - - - - 0.779 - - 0.984 integrator complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-050522-2]
15. slc12a9 ENSDARG00000060366 293 1.757 - - - - - - 0.766 - 0.991 solute carrier family 12, member 9 [Source:ZFIN;Acc:ZDB-GENE-050208-222]
16. msxa msxa 263 1.751 - - - 0.763 - - - - 0.988
17. PDZD8 ENSDARG00000088699 844 1.748 - 0.795 - - - - - - 0.953 PDZ domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-110310-2]
18. CR847925.1 CR847925.1 835 1.742 - 0.775 - - - - - - 0.967
19. si:ch211-51c14.1 ENSDARG00000054645, ENSDARG00000110953 2434 1.724 - - - - - - - 0.759 0.965 si:ch211-51c14.1 [Source:ZFIN;Acc:ZDB-GENE-120215-48]
20. ube2kb ENSDARG00000013505, ENSDARG00000114039 3968 1.724 - 0.762 - - - - - - 0.962 ubiquitin-conjugating enzyme E2Kb (UBC1 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-980605-9]
21. gorasp1 gorasp1 3075 1.72 - - - - - - 0.754 - 0.966
22. rras2 ENSDARG00000036252, ENSDARG00000111642 1714 1.715 - - - 0.755 - - - - 0.960 RAS related 2 [Source:ZFIN;Acc:ZDB-GENE-050417-352]
23. mrpl14 ENSDARG00000068886 1991 1.709 - - - 0.766 - - - - 0.943 mitochondrial ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-040426-1066]
24. erlin2 ENSDARG00000095968, ENSDARG00000110551 1023 1.708 - 0.876 - 0.832 - - - - - ER lipid raft associated 2 [Source:NCBI gene;Acc:100151163]
25. kcnj1a.4 ENSDARG00000090635 356 1.705 - 0.939 - - - - 0.766 - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-050420-186]
26. si:ch211-113e8.10 ENSDARG00000079631 498 1.705 - 0.801 - 0.904 - - - - - si:ch211-113e8.10 [Source:ZFIN;Acc:ZDB-GENE-090313-11]
27. hapln3 ENSDARG00000045802, ENSDARG00000116387 2242 1.703 - - - 0.842 - - - - 0.861 hyaluronan and proteoglycan link protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2089]
28. acat1 ENSDARG00000045888 1488 1.701 - 0.844 - - - - - 0.857 - acetyl-CoA acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040808-68]
29. cox11 ENSDARG00000061004, ENSDARG00000115002 423 1.688 - 0.893 - - - 0.795 - - - cytochrome c oxidase assembly homolog 11 (yeast) [Source:ZFIN;Acc:ZDB-GENE-050506-82]
30. narfl ENSDARG00000062216 768 1.688 - - - 0.705 - - - - 0.983 nuclear prelamin A recognition factor-like [Source:ZFIN;Acc:ZDB-GENE-070209-119]
31. pdzd2 ENSDARG00000059801, ENSDARG00000109983 1634 1.681 - 0.716 - - - - - - 0.965 PDZ domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-297]
32. wu:fc26g07 wu:fc26g07 1165 1.674 - - - 0.732 - - - 0.942 -
33. fam63b 484 1.661 - 0.946 - - - - - 0.715 - family with sequence similarity 63, member B
34. SMIM19 ENSDARG00000037423, ENSDARG00000110214 886 1.66 - 0.874 - 0.786 - - - - - small integral membrane protein 19 [Source:ZFIN;Acc:ZDB-GENE-050913-125]
35. CABZ01066717.1 CABZ01066717.1 351 1.657 - 0.920 - 0.737 - - - - -
36. CABZ01114089.1 CABZ01114089.1 127 1.636 - 0.919 - - - - - 0.717 -
37. si:ch73-18b11.2 ENSDARG00000094978 148 1.632 - 0.925 - - - - 0.707 - - si:ch73-18b11.2 [Source:ZFIN;Acc:ZDB-GENE-070912-333]
38. extl3 ENSDARG00000026811 4815 1.623 - - - - - - 0.712 - 0.911 exostosin-like glycosyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-041124-2]
39. usp12a ENSDARG00000078109 490 1.615 - 0.868 - 0.747 - - - - - ubiquitin specific peptidase 12a [Source:ZFIN;Acc:ZDB-GENE-060228-3]
40. fmr1 ENSDARG00000037433 5132 1.613 - - - 0.707 - - - - 0.906 fragile X mental retardation 1 [Source:ZFIN;Acc:ZDB-GENE-020731-6]
41. mfsd5 ENSDARG00000015997 570 1.607 - 0.744 - 0.863 - - - - - major facilitator superfamily domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040718-468]
42. ZNF576 ZNF576 1447 1.583 - - - 0.729 - - 0.854 - -
43. map7d1b ENSDARG00000104701 1655 1.581 - 0.880 - - - - 0.701 - - MAP7 domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080215-23]
44. si:dkeyp-89c11.3 si:dkeyp-89c11.3 343 1.58 - 0.874 - - - - 0.706 - -
45. SPAG9 ENSDARG00000078142 629 1.564 - - - 0.862 - - 0.702 - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
46. si:dkey-42i9.4 ENSDARG00000008049 4752 1.554 - 0.834 - 0.720 - - - - - si:dkey-42i9.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8398]
47. rnf150a ENSDARG00000024827 1903 1.55 - 0.808 - - - - 0.742 - - ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1]
48. mgat1a ENSDARG00000012407 605 1.537 - 0.721 - 0.816 - - - - - mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase a [Source:ZFIN;Acc:ZDB-GENE-040426-1515]
49. setd8b 2528 1.533 - 0.806 - 0.727 - - - - - SET domain containing (lysine methyltransferase) 8b
50. tmed4 ENSDARG00000024954 3476 1.518 - 0.761 - - - - - - 0.757 transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
51. CU694221.1 CU694221.1 748 1.504 - 0.707 - - - - 0.797 - -
52. krt17 ENSDARG00000094041 7683 1.501 - 0.722 - - - - - - 0.779 keratin 17 [Source:ZFIN;Acc:ZDB-GENE-060503-86]
53. NAGPA ENSDARG00000075149 983 1.49 - 0.774 - - - - 0.716 - - N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase [Source:ZFIN;Acc:ZDB-GENE-070928-4]
54. cab39l1 ENSDARG00000021374, ENSDARG00000112995 2033 1.488 - - - - - - 0.704 0.784 - calcium binding protein 39, like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2897]
55. aldh3a2b ENSDARG00000029381 2187 1.486 0.714 - - - - - 0.772 - - aldehyde dehydrogenase 3 family, member A2b [Source:ZFIN;Acc:ZDB-GENE-040912-103]
56. slc2a10 ENSDARG00000090820 637 1.475 - 0.746 - - - - 0.729 - - solute carrier family 2 (facilitated glucose transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-080204-6]
57. ccnc ENSDARG00000009607 1240 1.427 - - - 0.715 - 0.712 - - - cyclin C [Source:ZFIN;Acc:ZDB-GENE-030131-7369]
58. ide ENSDARG00000075570 4331 1.423 - 0.720 - - - - - 0.703 - insulin-degrading enzyme [Source:ZFIN;Acc:ZDB-GENE-070410-85]
59. snx9b ENSDARG00000069302, ENSDARG00000116107 5673 1.423 - - - - - - - 0.718 0.705 sorting nexin 9b [Source:ZFIN;Acc:ZDB-GENE-031118-50]
60. CACHD1 ENSDARG00000061590 1287 1.41 - 0.701 - - - - - 0.709 - cache domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100819-3]
61. pex7 ENSDARG00000042553 409 0.991 - - - - - - - - 0.991 peroxisomal biogenesis factor 7 [Source:ZFIN;Acc:ZDB-GENE-050320-105]
62. slc6a19b ENSDARG00000056719 140 0.99 - - - - - - - - 0.990 solute carrier family 6 (neutral amino acid transporter), member 19b [Source:ZFIN;Acc:ZDB-GENE-030131-4755]
63. def6b ENSDARG00000044524 99 0.99 - - - - - - - - 0.990 differentially expressed in FDCP 6b homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-110408-59]
64. sox8 sox8 109 0.989 - - - - - - - - 0.989
65. HTR1E 103 0.989 - - - - - - - - 0.989 5-hydroxytryptamine receptor 1E
66. mylkb ENSDARG00000004753 95 0.989 - - - - - - - - 0.989 myosin light chain kinase b [Source:ZFIN;Acc:ZDB-GENE-041111-150]
67. zgc:154006 ENSDARG00000061797 152 0.989 - - - - - - - - 0.989 zgc:154006 [Source:ZFIN;Acc:ZDB-GENE-061013-134]
68. PCDH20 ENSDARG00000036424, ENSDARG00000101910 90 0.989 - - - - - - - - 0.989 protocadherin 20 [Source:NCBI gene;Acc:100007362]
69. TLN2 TLN2 359 0.989 - - - - - - - - 0.989
70. si:ch211-135f11.1 166 0.989 - - - - - - - - 0.989 si:ch211-135f11.1, transcript variant X3
71. nudt3b ENSDARG00000042123 311 0.989 - - - - - - - - 0.989 nudix (nucleoside diphosphate linked moiety X)-type motif 3b [Source:ZFIN;Acc:ZDB-GENE-041010-128]
72. slc25a23a ENSDARG00000005690 824 0.988 - - - - - - - - 0.988 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23a [Source:ZFIN;Acc:ZDB-GENE-121214-154]
73. ppp6r2b ENSDARG00000069654 323 0.988 - - - - - - - - 0.988 protein phosphatase 6, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-070705-441]
74. panx1a ENSDARG00000025285 352 0.987 - - - - - - - - 0.987 pannexin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-766]
75. si:dkeyp-4f2.5 si:dkeyp-4f2.5 232 0.987 - - - - - - - - 0.987
76. smim8 ENSDARG00000071040 622 0.987 - - - - - - - - 0.987 small integral membrane protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-423]
77. pfkfb2a ENSDARG00000023840 184 0.986 - - - - - - - - 0.986 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2a [Source:ZFIN;Acc:ZDB-GENE-040426-966]
78. LDLR LDLR 838 0.986 - - - - - - - - 0.986
79. mmp9 ENSDARG00000042816 298 0.986 - - - - - - - - 0.986 matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2132]
80. LARS2 ENSDARG00000075337 181 0.986 - - - - - - - - 0.986 leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
81. sin3ab ENSDARG00000059812 2140 0.986 - - - - - - - - 0.986 SIN3 transcription regulator family member Ab [Source:ZFIN;Acc:ZDB-GENE-030131-2066]
82. tacc1 ENSDARG00000073753 1127 0.985 - - - - - - - - 0.985 transforming, acidic coiled-coil containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-090521-5]
83. MON1B_1 MON1B_1 697 0.985 - - - - - - - - 0.985
84. SLC35A2 ENSDARG00000058990 289 0.984 - - - - - - - - 0.984 solute carrier family 35 (UDP-galactose transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030616-62]
85. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 0.984 - - - - - - - - 0.984 contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
86. fgf8a ENSDARG00000003399 580 0.984 - - - - - - - - 0.984 fibroblast growth factor 8a [Source:ZFIN;Acc:ZDB-GENE-990415-72]
87. RNF5 ENSDARG00000075606 1730 0.984 - - - - - - - - 0.984 ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
88. fbxl4 ENSDARG00000026941, ENSDARG00000113167 396 0.984 - - - - - - - - 0.984 F-box and leucine-rich repeat protein 4 [Source:ZFIN;Acc:ZDB-GENE-041114-187]
89. CACUL1 ENSDARG00000021885 691 0.983 - - - - - - - - 0.983 CDK2 associated cullin domain 1 [Source:ZFIN;Acc:ZDB-GENE-170113-2]
90. ccdc90b ENSDARG00000044626, ENSDARG00000110887 501 0.983 - - - - - - - - 0.983 coiled-coil domain containing 90B [Source:ZFIN;Acc:ZDB-GENE-040724-162]
91. zgc:113333 ENSDARG00000038242 797 0.983 - - - - - - - - 0.983 zgc:113333 [Source:ZFIN;Acc:ZDB-GENE-050320-57]
92. PACS1_1 PACS1_1 1264 0.983 - - - - - - - - 0.983
93. NSMCE2 ENSDARG00000076379 2133 0.982 - - - - - - - - 0.982 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase [Source:ZFIN;Acc:ZDB-GENE-081022-128]
94. phactr4a ENSDARG00000015552 1315 0.982 - - - - - - - - 0.982 phosphatase and actin regulator 4a [Source:ZFIN;Acc:ZDB-GENE-051030-69]
95. ing2 ENSDARG00000104907 1336 0.982 - - - - - - - - 0.982 inhibitor of growth family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-147]
96. twistnb ENSDARG00000024416 1077 0.981 - - - - - - - - 0.981 TWIST neighbor [Source:ZFIN;Acc:ZDB-GENE-041007-3]
97. ssh2b ENSDARG00000098955 614 0.981 - - - - - - - - 0.981 slingshot protein phosphatase 2b [Source:ZFIN;Acc:ZDB-GENE-081205-4]
98. zgc:136439 ENSDARG00000009267 720 0.981 - - - - - - - - 0.981 zgc:136439 [Source:ZFIN;Acc:ZDB-GENE-060421-2858]
99. ZDHHC3 ZDHHC3 1208 0.98 - - - - - - - - 0.980
100. prc1a ENSDARG00000100918 1746 0.98 - - - - - - - - 0.980 protein regulator of cytokinesis 1a [Source:ZFIN;Acc:ZDB-GENE-020801-3]

There are 1279 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA