Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ppie

Gene Name Gene ID Reads Annotation
ppie ENSDARG00000103234, ENSDARG00000111596 511 peptidylprolyl isomerase E (cyclophilin E) [Source:ZFIN;Acc:ZDB-GENE-050417-167]










Genes with expression patterns similar to ppie

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ppie ENSDARG00000103234, ENSDARG00000111596 511 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 peptidylprolyl isomerase E (cyclophilin E) [Source:ZFIN;Acc:ZDB-GENE-050417-167]
2. edn2 ENSDARG00000070578 276 1.836 0.846 - 0.990 - - - - - - endothelin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-774]
3. rybpb ENSDARG00000053459 1464 1.806 - - 0.982 0.824 - - - - - RING1 and YY1 binding protein b [Source:ZFIN;Acc:ZDB-GENE-061103-96]
4. wu:fb52c12 wu:fb52c12 763 1.794 0.810 - 0.984 - - - - - -
5. ints9 ENSDARG00000067913 600 1.776 - - 0.989 - - - 0.787 - - integrator complex subunit 9 [Source:ZFIN;Acc:ZDB-GENE-061013-129]
6. dhx34 ENSDARG00000061168 349 1.761 - - 0.988 0.773 - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Source:ZFIN;Acc:ZDB-GENE-061207-30]
7. cactin ENSDARG00000059866 553 1.737 - - 0.986 0.751 - - - - - cactin [Source:ZFIN;Acc:ZDB-GENE-060503-322]
8. si:dkey-66i24.9 ENSDARG00000096689 796 1.736 - - 0.980 0.756 - - - - - si:dkey-66i24.9 [Source:ZFIN;Acc:ZDB-GENE-130531-63]
9. hsbp1a ENSDARG00000069425 1086 1.734 - 0.750 0.984 - - - - - - heat shock factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050320-136]
10. TUBGCP6 1991 1.729 - - 0.989 - - 0.740 - - - tubulin, gamma complex associated protein 6
11. snai1b ENSDARG00000046019 886 1.726 - - 0.985 0.741 - - - - - snail family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-980526-514]
12. BX323045.3 BX323045.3 1044 1.725 - - 0.990 0.735 - - - - -
13. EEF1E1 ENSDARG00000071774 3806 1.717 - 0.765 0.952 - - - - - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
14. rexo1 ENSDARG00000026986 770 1.707 - 0.718 0.989 - - - - - - REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]
15. spopla ENSDARG00000010563 775 1.667 - - 0.916 0.751 - - - - - speckle-type POZ protein-like a [Source:ZFIN;Acc:ZDB-GENE-050320-3]
16. eif4e3 ENSDARG00000005078 1624 1.645 - 0.796 - 0.849 - - - - - eukaryotic translation initiation factor 4E family member 3 [Source:ZFIN;Acc:ZDB-GENE-040912-156]
17. rbm25 rbm25 3629 1.631 - - 0.899 0.732 - - - - -
18. ggps1 ENSDARG00000023627 650 1.549 - 0.745 - - - 0.804 - - - geranylgeranyl diphosphate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8742]
19. Mar-06 Mar-06 953 1.544 - - - 0.725 - 0.819 - - -
20. pgm2 ENSDARG00000018178 985 1.535 - 0.757 - 0.778 - - - - - phosphoglucomutase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2218]
21. IQUB ENSDARG00000061899 91 1.533 0.727 - - - - - 0.806 - - IQ motif and ubiquitin domain containing [Source:ZFIN;Acc:ZDB-GENE-110421-1]
22. si:dkeyp-118b1.2 ENSDARG00000079131 705 1.523 - - 0.764 - - - 0.759 - - si:dkeyp-118b1.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7685]
23. CABZ01078889.1 CABZ01078889.1 911 1.505 - - - 0.775 - 0.730 - - -
24. cmc1 ENSDARG00000103670 1197 1.488 - - - 0.785 - 0.703 - - - C-x(9)-C motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2626]
25. sorbs1 ENSDARG00000103435 2297 1.481 - 0.719 - 0.762 - - - - - sorbin and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090313-168]
26. OSBPL3 OSBPL3 145 1.471 - 0.712 - 0.759 - - - - -
27. cspg4 ENSDARG00000078227 1084 1.469 - 0.745 - - - - 0.724 - - chondroitin sulfate proteoglycan 4 [Source:ZFIN;Acc:ZDB-GENE-050519-1]
28. si:ch211-241n15.2 si:ch211-241n15.2 435 1.468 0.713 - - 0.755 - - - - -
29. myf5 ENSDARG00000007277 1051 1.464 - 0.747 - - - - 0.717 - - myogenic factor 5 [Source:ZFIN;Acc:ZDB-GENE-000616-6]
30. TUSC3 ENSDARG00000078854 1021 0.991 - - 0.991 - - - - - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
31. s100a1 ENSDARG00000015543 274 0.991 - - 0.991 - - - - - - S100 calcium binding protein A1 [Source:ZFIN;Acc:ZDB-GENE-040916-1]
32. bbs2 ENSDARG00000041621, ENSDARG00000110124 321 0.991 - - 0.991 - - - - - - Bardet-Biedl syndrome 2 [Source:ZFIN;Acc:ZDB-GENE-020801-1]
33. si:ch211-283l16.1 ENSDARG00000112586 131 0.991 - - 0.991 - - - - - - si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
34. atg4a ENSDARG00000014531 481 0.991 - - 0.991 - - - - - - autophagy related 4A, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-430]
35. zmat5 ENSDARG00000035434 983 0.991 - - 0.991 - - - - - - zinc finger, matrin-type 5 [Source:ZFIN;Acc:ZDB-GENE-040808-31]
36. tmem194b tmem194b 724 0.991 - - 0.991 - - - - - -
37. foxd1 ENSDARG00000029179 726 0.99 - - 0.990 - - - - - - forkhead box D1 [Source:ZFIN;Acc:ZDB-GENE-040426-2094]
38. lin54 ENSDARG00000063194 2583 0.99 - - 0.990 - - - - - - lin-54 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-060929-440]
39. CABZ01087568.1 CABZ01087568.1 1487 0.99 - - 0.990 - - - - - -
40. brap ENSDARG00000008560 821 0.99 - - 0.990 - - - - - - BRCA1 associated protein [Source:ZFIN;Acc:ZDB-GENE-040718-168]
41. CABZ01068153.1 CABZ01068153.1 211 0.99 - - 0.990 - - - - - -
42. fam203a fam203a 570 0.99 - - 0.990 - - - - - -
43. prr18 ENSDARG00000093768 409 0.99 - - 0.990 - - - - - - proline rich 18 [Source:ZFIN;Acc:ZDB-GENE-081107-6]
44. rad18 ENSDARG00000027938 574 0.989 - - 0.989 - - - - - - RAD18 E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-745]
45. egln2 ENSDARG00000062562 2500 0.989 - - 0.989 - - - - - - egl-9 family hypoxia-inducible factor 2 [Source:ZFIN;Acc:ZDB-GENE-060503-757]
46. SEMA4C ENSDARG00000079611 610 0.989 - - 0.989 - - - - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C [Source:ZFIN;Acc:ZDB-GENE-080303-16]
47. CREB3L4 1085 0.989 - - 0.989 - - - - - - cAMP responsive element binding protein 3-like 4
48. PKN2 ENSDARG00000101293 358 0.989 - - 0.989 - - - - - - protein kinase N2 [Source:HGNC Symbol;Acc:HGNC:9406]
49. clk2a ENSDARG00000062954 1890 0.989 - - 0.989 - - - - - - CDC-like kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-298]
50. dbf4 ENSDARG00000074796 489 0.988 - - 0.988 - - - - - - DBF4 zinc finger [Source:ZFIN;Acc:ZDB-GENE-091020-13]
51. thbs1b ENSDARG00000010785 3095 0.988 - - 0.988 - - - - - - thrombospondin 1b [Source:ZFIN;Acc:ZDB-GENE-020708-1]
52. pi4k2a ENSDARG00000033666 1257 0.988 - - 0.988 - - - - - - phosphatidylinositol 4-kinase type 2 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-2675]
53. tbpl1 ENSDARG00000036868 711 0.988 - - 0.988 - - - - - - TBP-like 1 [Source:ZFIN;Acc:ZDB-GENE-040520-2]
54. tnfaip3 ENSDARG00000027777 1066 0.988 - - 0.988 - - - - - - tumor necrosis factor, alpha-induced protein 3 [Source:ZFIN;Acc:ZDB-GENE-100212-2]
55. flad1 ENSDARG00000070390 604 0.987 - - 0.987 - - - - - - flavin adenine dinucleotide synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-44]
56. zgc:195001 ENSDARG00000070484 3281 0.987 - - 0.987 - - - - - - zgc:195001 [Source:ZFIN;Acc:ZDB-GENE-081022-173]
57. fdx1l 461 0.987 - - 0.987 - - - - - - ferredoxin 1-like
58. ARMCX3 ARMCX3 328 0.987 - - 0.987 - - - - - -
59. HDX ENSDARG00000079382 513 0.987 - - 0.987 - - - - - - highly divergent homeobox [Source:ZFIN;Acc:ZDB-GENE-140106-165]
60. smg6 ENSDARG00000100481 493 0.986 - - 0.986 - - - - - - SMG6 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-081107-52]
61. ubl3b ENSDARG00000021556 1210 0.986 - - 0.986 - - - - - - ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
62. SON SON 510 0.986 - - 0.986 - - - - - -
63. hrasb ENSDARG00000005651 662 0.986 - - 0.986 - - - - - - -Ha-ras Harvey rat sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050522-466]
64. zranb2 ENSDARG00000044332 6723 0.986 - - 0.986 - - - - - - zinc finger, RAN-binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2743]
65. xpc ENSDARG00000039754 515 0.986 - - 0.986 - - - - - - xeroderma pigmentosum, complementation group C [Source:ZFIN;Acc:ZDB-GENE-030131-8461]
66. APBA3 APBA3 852 0.986 - - 0.986 - - - - - -
67. zgc:110329 ENSDARG00000035532, ENSDARG00000110423 2229 0.986 - - 0.986 - - - - - - zgc:110329 [Source:ZFIN;Acc:ZDB-GENE-050417-334]
68. nr1h3 ENSDARG00000098439 859 0.986 - - 0.986 - - - - - - nuclear receptor subfamily 1, group H, member 3 [Source:ZFIN;Acc:ZDB-GENE-050410-7]
69. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 0.986 - - 0.986 - - - - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
70. rbm39b ENSDARG00000041853 1421 0.986 - - 0.986 - - - - - - RNA binding motif protein 39b [Source:ZFIN;Acc:ZDB-GENE-050327-97]
71. reep5 ENSDARG00000100742 1470 0.986 - - 0.986 - - - - - - receptor accessory protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9181]
72. si:dkey-71p21.9 si:dkey-71p21.9 603 0.985 - - 0.985 - - - - - -
73. ptpn1 ENSDARG00000007923 3647 0.985 - - 0.985 - - - - - - protein tyrosine phosphatase, non-receptor type 1 [Source:ZFIN;Acc:ZDB-GENE-980605-23]
74. pard6b ENSDARG00000003865 990 0.985 - - 0.985 - - - - - - par-6 partitioning defective 6 homolog beta (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-090312-133]
75. irf2a ENSDARG00000007387 915 0.985 - - 0.985 - - - - - - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
76. srebf2 ENSDARG00000063438 1982 0.985 - - 0.985 - - - - - - sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
77. nlk1 ENSDARG00000006566 1123 0.985 - - 0.985 - - - - - - nemo-like kinase, type 1 [Source:ZFIN;Acc:ZDB-GENE-040701-1]
78. zgc:113348 ENSDARG00000103795 1351 0.984 - - 0.984 - - - - - - zgc:113348 [Source:ZFIN;Acc:ZDB-GENE-050227-10]
79. wtip ENSDARG00000103607 797 0.984 - - 0.984 - - - - - - WT1 interacting protein [Source:ZFIN;Acc:ZDB-GENE-050419-261]
80. ARHGAP22 ENSDARG00000076434 1406 0.984 - - 0.984 - - - - - - Rho GTPase activating protein 22 [Source:HGNC Symbol;Acc:HGNC:30320]
81. agpat3 ENSDARG00000036549 1093 0.984 - - 0.984 - - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2765]
82. wu:fb12e11 wu:fb12e11 2332 0.984 - - 0.984 - - - - - -
83. BX571768.1 ENSDARG00000116980 711 0.984 - - 0.984 - - - - - -
84. klf5a 1072 0.983 - - 0.983 - - - - - - Kruppel-like factor 5a
85. arl6ip4 ENSDARG00000105036, ENSDARG00000110324, ENSDARG00000116805 1142 0.983 - - 0.983 - - - - - - ADP-ribosylation factor-like 6 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-405]
86. zgc:158309 zgc:158309 2696 0.982 - - 0.982 - - - - - -
87. sort1a ENSDARG00000029402, ENSDARG00000117178 1480 0.982 - - 0.982 - - - - - - sortilin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2329]
88. GTSE1 ENSDARG00000013719 1115 0.982 - - 0.982 - - - - - - G-2 and S-phase expressed 1 [Source:ZFIN;Acc:ZDB-GENE-050522-493]
89. notch1a ENSDARG00000103554 498 0.981 - - 0.981 - - - - - - notch 1a [Source:ZFIN;Acc:ZDB-GENE-990415-173]
90. rspo2 ENSDARG00000079570, ENSDARG00000113124 1688 0.981 - - 0.981 - - - - - - R-spondin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-667]
91. pola2 ENSDARG00000015070 2286 0.981 - - 0.981 - - - - - - polymerase (DNA directed), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-778]
92. dscr3 1229 0.981 - - 0.981 - - - - - - Down syndrome critical region 3
93. exosc6 ENSDARG00000036060, ENSDARG00000115735 531 0.981 - - 0.981 - - - - - - exosome component 6 [Source:ZFIN;Acc:ZDB-GENE-050522-362]
94. twf1a ENSDARG00000115712 3465 0.981 - - 0.981 - - - - - - twinfilin actin-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4402]
95. rapgef2 ENSDARG00000005482 2586 0.981 - - 0.981 - - - - - - Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
96. hopx ENSDARG00000089368 2342 0.981 - - 0.981 - - - - - - HOP homeobox [Source:ZFIN;Acc:ZDB-GENE-031016-2]
97. zc3h18 ENSDARG00000062506 1676 0.981 - - 0.981 - - - - - - zinc finger CCCH-type containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-13]
98. ppp2r5eb ENSDARG00000069118 1902 0.981 - - 0.981 - - - - - - protein phosphatase 2, regulatory subunit B', epsilon isoform b [Source:ZFIN;Acc:ZDB-GENE-030904-6]
99. alg5 ENSDARG00000021938, ENSDARG00000061235 2279 0.981 - - 0.981 - - - - - - asparagine-linked glycosylation 5 (dolichyl-phosphate beta-glucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-6586]
100. ek1 ENSDARG00000020080 742 0.98 - - 0.980 - - - - - - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]

There are 853 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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