Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ppef1

Gene Name Gene ID Reads Annotation
ppef1 ENSDARG00000020191 1 protein phosphatase, EF-hand calcium binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-080303-27]










Genes with expression patterns similar to ppef1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ppef1 ENSDARG00000020191 1 2 - - - - - - - 1.000 1.000 protein phosphatase, EF-hand calcium binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-080303-27]
2. si:dkey-246e1.1 si:dkey-246e1.1 1 1 - - - - - - - - 1.000
3. slc1a8a ENSDARG00000104204 1 1 - - - - - - - - 1.000 solute carrier family 1 (glutamate transporter), member 8a [Source:ZFIN;Acc:ZDB-GENE-101111-8]
4. zgc:198241 ENSDARG00000076483, ENSDARG00000116081 3 1 - - - - - - - - 1.000 zgc:198241 [Source:ZFIN;Acc:ZDB-GENE-080303-14]
5. ZNF337_19 ZNF337_19 3 1 - - - - - - - - 1.000
6. CR381673.1 ENSDARG00000098337 7 1 - - - - - - - - 1.000
7. gabra6b ENSDARG00000058736 0 1 - - - - - - - - 1.000 gamma-aminobutyric acid (GABA) A receptor, alpha 6b [Source:ZFIN;Acc:ZDB-GENE-080815-1]
8. TNPO1 ENSDARG00000035390 1 1 - - - - - - - - 1.000 transportin 1 [Source:ZFIN;Acc:ZDB-GENE-080819-1]
9. ca15b ENSDARG00000040510 5 1 - - - - - - - 1.000 - carbonic anhydrase XVb [Source:ZFIN;Acc:ZDB-GENE-040426-2222]
10. si:ch211-14a17.10 ENSDARG00000076534 12 1 - - - - - - - 1.000 - si:ch211-14a17.10 [Source:ZFIN;Acc:ZDB-GENE-030616-581]
11. si:ch211-208f21.4 si:ch211-208f21.4 4 1 - - - - - - - - 1.000
12. GRINA GRINA 12 1 - - - - - - - - 1.000
13. BX682234.2 BX682234.2 28 1 - - - - - - - - 1.000
14. BEGAIN_1 BEGAIN_1 7 1 - - - - - - - 1.000 -
15. CR450711.2 CR450711.2 0 1 - - - - - - - - 1.000
16. SOBP SOBP 0 1 - - - - - - - - 1.000
17. GBE1 GBE1 12 1 - - - - - - - - 1.000
18. dmc1 ENSDARG00000055883, ENSDARG00000110457 5 1 - - - - - - - - 1.000 DNA meiotic recombinase 1 [Source:ZFIN;Acc:ZDB-GENE-060331-93]
19. BX000981.1 ENSDARG00000092940 1 1 - - - - - - - - 1.000
20. si:dkey-192k22.2 ENSDARG00000095111 4 1 - - - - - - - - 1.000 si:dkey-192k22.2 [Source:ZFIN;Acc:ZDB-GENE-090313-219]
21. PEG3_1 PEG3_1 5 1 - - - - - - - 1.000 -
22. NOX5 ENSDARG00000079773 0 1 - - - - - - - - 1.000 NADPH oxidase, EF-hand calcium binding domain 5 [Source:ZFIN;Acc:ZDB-GENE-091120-9]
23. pdgfb pdgfb 5 1 - - - - - - - 1.000 -
24. CR846080.5 CR846080.5 0 1 - - - - - - - - 1.000
25. si:dkey-80c24.5 ENSDARG00000092501 6 1 - - - - - - - - 1.000 si:dkey-80c24.5 [Source:ZFIN;Acc:ZDB-GENE-061207-73]
26. kcnip2 ENSDARG00000075846 1 1 - - - - - - - - 1.000 Kv channel interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-081031-91]
27. si:dkey-25o1.5 si:dkey-25o1.5 5 1 - - - - - - - - 1.000
28. si:ch211-276k2.2 4 1 - - - - - - - - 1.000 si:ch211-276k2.2
29. ccbl2 4 1 - - - - - - - - 1.000 cysteine conjugate-beta lyase 2, transcript variant X4
30. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1 - - - - - - - - 1.000 purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
31. CT573264.3 CT573264.3 0 1 - - - - - - - - 1.000
32. U5_4 U5_4 1 1 - - - - - - - - 1.000
33. mgat4c ENSDARG00000041791, ENSDARG00000109972 0 1 - - - - - - - - 1.000 mgat4 family member C [Source:ZFIN;Acc:ZDB-GENE-091204-429]
34. OTUD7A ENSDARG00000045556 1 1 - - - - - - - - 1.000 OTU deubiquitinase 7A [Source:HGNC Symbol;Acc:HGNC:20718]
35. si:dkey-193n17.9 ENSDARG00000094791 2 1 - - - - - - - 1.000 - si:dkey-193n17.9 [Source:ZFIN;Acc:ZDB-GENE-070912-421]
36. CABZ01087946.1 CABZ01087946.1 2 1 - - - - - - - - 1.000
37. prf1.6 ENSDARG00000024522, ENSDARG00000114201 0 1 - - - - - - - - 1.000 perforin 1.6 [Source:ZFIN;Acc:ZDB-GENE-070410-126]
38. si:dkey-65b12.12 ENSDARG00000094458 26 1 - - - - - - - - 1.000 si:dkey-65b12.12 [Source:ZFIN;Acc:ZDB-GENE-060526-325]
39. CU596012.1 CU596012.1 24 1 - - - - - - - - 1.000
40. FAM163A_1 ENSDARG00000093021 6 1 - - - - - - - - 1.000 family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
41. epm2a ENSDARG00000059044 10 1 - - - - - - - - 1.000 epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) [Source:ZFIN;Acc:ZDB-GENE-100922-143]
42. zgc:171759_1 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 1 1 - - - - - - - - 1.000 zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
43. appa ENSDARG00000104279 4 1 - - - - - - - 1.000 - amyloid beta (A4) precursor protein a [Source:ZFIN;Acc:ZDB-GENE-000616-13]
44. si:ch211-232k18.2 si:ch211-232k18.2 2 1 - - - - - - - - 1.000
45. trim35-24 ENSDARG00000099684, ENSDARG00000114154 4 1 - - - - - - - - 1.000 tripartite motif containing 35-24 [Source:ZFIN;Acc:ZDB-GENE-060421-8366]
46. fibpb ENSDARG00000087666 0 1 - - - - - - - - 1.000 fibroblast growth factor (acidic) intracellular binding protein b [Source:ZFIN;Acc:ZDB-GENE-040630-2]
47. RNF207 RNF207 9 1 - - - - - - - - 1.000
48. CU467646.3 ENSDARG00000099076 36 1 - - - - - - - - 1.000 mucin-2-like [Source:NCBI gene;Acc:108179180]
49. CABZ01035647.1 CABZ01035647.1 5 1 - - - - - - - - 1.000
50. CABZ01055343.2_1 CABZ01055343.2_1 6 1 - - - - - - - - 1.000
51. CT025887.1 ENSDARG00000114574 1 1 - - - - - - - - 1.000 uncharacterized LOC110440185 [Source:NCBI gene;Acc:110440185]
52. asf1ba_1 ENSDARG00000101037 3 1 - - - - - - - - 1.000 anti-silencing function 1Ba histone chaperone [Source:ZFIN;Acc:ZDB-GENE-031118-197]
53. treh ENSDARG00000077911 9 1 - - - - - - - 1.000 - trehalase (brush-border membrane glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-070912-84]
54. hsf4 ENSDARG00000013251 5 1 - - - - - - - 1.000 - heat shock transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-050306-18]
55. sowahca ENSDARG00000098790 1 1 - - - - - - - - 1.000 sosondowah ankyrin repeat domain family Ca [Source:ZFIN;Acc:ZDB-GENE-081104-106]
56. BX323023.1 BX323023.1 1 1 - - - - - - - - 1.000
57. ved ENSDARG00000102389 0 1 - - - - - - - - 1.000 ventrally expressed dharma/bozozok antagonist [Source:ZFIN;Acc:ZDB-GENE-030813-1]
58. tyro3 ENSDARG00000005356 4 1 - - - - - - - - 1.000 TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
59. gabbr1a ENSDARG00000018967 2 1 - - - - - - - 1.000 - gamma-aminobutyric acid (GABA) B receptor, 1a [Source:ZFIN;Acc:ZDB-GENE-030904-5]
60. lsm10 5 1 - - - - - - - - 1.000 LSM10, U7 small nuclear RNA associated
61. XAF1 ENSDARG00000068939 12 1 - - - - - - - 1.000 - XIAP associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-060929-840]
62. CABZ01072338.1 CABZ01072338.1 0 1 - - - - - - - - 1.000
63. scg5_1 ENSDARG00000032126, ENSDARG00000077045 6 1 - - - - - - - - 1.000 secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
64. zgc:174698_1 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 1 1 - - - - - - - - 1.000 zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
65. si:dkey-4m13.3 6 1 - - - - - - - 1.000 - si:dkey-4m13.3
66. si:ch211-199i18.8 si:ch211-199i18.8 4 1 - - - - - - - 1.000 -
67. bmp15 ENSDARG00000037491 16 1 - - - - - - - - 1.000 bone morphogenetic protein 15 [Source:ZFIN;Acc:ZDB-GENE-030131-6115]
68. atcayb ENSDARG00000059781 0 1 - - - - - - - - 1.000 ataxia, cerebellar, Cayman type b [Source:ZFIN;Acc:ZDB-GENE-070912-220]
69. EXT1_1 EXT1_1 3 1 - - - - - - - - 1.000
70. si:dkey-233h12.2 si:dkey-233h12.2 1 1 - - - - - - - - 1.000
71. si:dkey-202i12.5 si:dkey-202i12.5 20 1 - - - - - - - - 1.000
72. pip4k2ab ENSDARG00000063544 1 1 - - - - - - - - 1.000 phosphatidylinositol-5-phosphate 4-kinase, type II, alpha b [Source:ZFIN;Acc:ZDB-GENE-070912-272]
73. sobpb ENSDARG00000017386 0 1 - - - - - - - - 1.000 sine oculis binding protein homolog (Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-041210-8]
74. ccdc157 ENSDARG00000056279 31 1 - - - - - - - 1.000 - coiled-coil domain containing 157 [Source:ZFIN;Acc:ZDB-GENE-030616-155]
75. wibg wibg 2 1 - - - - - - - - 1.000
76. RIMS2 RIMS2 2 1 - - - - - - - - 1.000
77. si:dkey-9p20.24 si:dkey-9p20.24 4 1 - - - - - - - - 1.000
78. mpp4a ENSDARG00000058222 2 1 - - - - - - - 1.000 - membrane protein, palmitoylated 4a (MAGUK p55 subfamily member 4) [Source:ZFIN;Acc:ZDB-GENE-070912-523]
79. KLHDC8A ENSDARG00000061000 13 1 - - - - - - - 1.000 - kelch domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-120810-3]
80. wu:fe11b02_1 wu:fe11b02_1 7 1 - - - - - - - - 1.000
81. SNORA35 SNORA35 0 1 - - - - - - - - 1.000
82. OGFR ENSDARG00000037837 4 1 - - - - - - - - 1.000 opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
83. map3k9 ENSDARG00000013491 1 1 - - - - - - - - 1.000 mitogen-activated protein kinase kinase kinase 9 [Source:ZFIN;Acc:ZDB-GENE-081113-5]
84. si:dkey-199m13.3 si:dkey-199m13.3 2 1 - - - - - - - - 1.000
85. yme1l1b ENSDARG00000104401 0 1 - - - - - - - - 1.000 YME1-like 1b [Source:ZFIN;Acc:ZDB-GENE-070410-25]
86. pdzrn3a ENSDARG00000073757 1 1 - - - - - - - 1.000 - PDZ domain containing RING finger 3a [Source:ZFIN;Acc:ZDB-GENE-090313-307]
87. NYAP2 NYAP2 7 0.99 - - - - - - - - 0.990
88. CR853287.1 CR853287.1 6 0.971 - - - - - - - - 0.971
89. plcb4 1 0.951 - - - - - - - - 0.951 phospholipase C, beta 4
90. slco1c1 ENSDARG00000016749 30 0.951 - - - - - - - 0.951 - solute carrier organic anion transporter family, member 1C1 [Source:ZFIN;Acc:ZDB-GENE-041210-50]
91. GPR139 14 0.943 - - - - - - - - 0.943 G protein-coupled receptor 139, transcript variant X1
92. FP103005.1 ENSDARG00000099852 4 0.939 - - - - - - - - 0.939
93. rtn4rl2a ENSDARG00000052012 5 0.936 - - - - - - - - 0.936 reticulon 4 receptor-like 2 a [Source:ZFIN;Acc:ZDB-GENE-040310-4]
94. CU929521.1 CU929521.1 1 0.935 - - - - - - - - 0.935
95. BX511172.1 BX511172.1 1 0.934 - - - - - - - 0.934 -
96. fgfr1b ENSDARG00000011190 10 0.928 - - - - - - - 0.928 - fibroblast growth factor receptor 1b [Source:ZFIN;Acc:ZDB-GENE-060503-14]
97. dennd2db ENSDARG00000030250 24 0.922 - - - - - - - 0.922 - DENN/MADD domain containing 2Db [Source:ZFIN;Acc:ZDB-GENE-041114-34]
98. PLCB1 2 0.917 - - - - - - - - 0.917 phospholipase C beta 1
99. ptk2.2 ptk2.2 3 0.917 - - - - - - - - 0.917
100. pard6ga ENSDARG00000031876 3 0.917 - - - - - - - - 0.917 par-6 family cell polarity regulator gamma a [Source:ZFIN;Acc:ZDB-GENE-050923-1]

There are 84 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA