Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for popdc3

Gene Name Gene ID Reads Annotation
popdc3 ENSDARG00000058551 538 popeye domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040624-10]










Genes with expression patterns similar to popdc3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. popdc3 ENSDARG00000058551 538 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 popeye domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040624-10]
2. rad54b ENSDARG00000092134 231 2.343 - 0.762 - - - 0.707 0.874 - - RAD54 homolog B [Source:ZFIN;Acc:ZDB-GENE-060810-50]
3. uros ENSDARG00000027491 1147 1.696 - - - - - 0.765 0.931 - - uroporphyrinogen III synthase [Source:ZFIN;Acc:ZDB-GENE-040323-2]
4. nck1b ENSDARG00000075369 1596 1.694 - - - - - 0.737 0.957 - - NCK adaptor protein 1b [Source:ZFIN;Acc:ZDB-GENE-090317-1]
5. ENSDARG00000091446 ENSDARG00000091446 239 1.681 - 0.778 - - - - 0.903 - -
6. FBXL7 ENSDARG00000062251 179 1.671 - 0.861 - - - - 0.810 - - F-box and leucine-rich repeat protein 7 [Source:ZFIN;Acc:ZDB-GENE-061215-122]
7. chmp3 ENSDARG00000038064 577 1.648 - - - - - 0.733 0.915 - - charged multivesicular body protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2600]
8. GANAB_2 GANAB_2 3210 1.645 - - - - - 0.729 0.916 - -
9. si:ch211-194k22.8 ENSDARG00000096711 1318 1.644 - - - - - 0.757 0.887 - - si:ch211-194k22.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1820]
10. adck1 ENSDARG00000062561 22 1.643 - - - - - 0.740 0.903 - - aarF domain containing kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080401-5]
11. gyg1b ENSDARG00000059391 389 1.643 - 0.777 - - - 0.866 - - - glycogenin 1b [Source:ZFIN;Acc:ZDB-GENE-040625-30]
12. CR855306.1 ENSDARG00000099475 102 1.641 - - - - - 0.748 0.893 - -
13. hspb11 ENSDARG00000002204 879 1.633 - 0.713 - - - 0.920 - - - heat shock protein, alpha-crystallin-related, b11 [Source:ZFIN;Acc:ZDB-GENE-030131-5148]
14. pdp2 ENSDARG00000058571, ENSDARG00000115915 464 1.631 - - - - - 0.780 0.851 - - putative pyruvate dehydrogenase phosphatase isoenzyme 2 [Source:ZFIN;Acc:ZDB-GENE-000921-2]
15. gltpd1 gltpd1 377 1.62 - - - - - 0.767 0.853 - -
16. zgc:171971 ENSDARG00000042054 388 1.618 - 0.878 - - - - 0.740 - - zgc:171971 [Source:ZFIN;Acc:ZDB-GENE-070928-37]
17. casc3 ENSDARG00000029911 1174 1.616 - - - - - 0.804 0.812 - - casc3, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-040308-2]
18. si:ch211-174j14.2 ENSDARG00000093015 111 1.612 - 0.711 - - - - 0.901 - - si:ch211-174j14.2 [Source:ZFIN;Acc:ZDB-GENE-050419-63]
19. coq4 ENSDARG00000104733 402 1.606 - 0.751 - - - 0.855 - - - coenzyme Q4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060526-218]
20. nsmaf ENSDARG00000051920 474 1.606 - - - - - 0.716 0.890 - - neutral sphingomyelinase (N-SMase) activation associated factor [Source:ZFIN;Acc:ZDB-GENE-050417-342]
21. rnmt ENSDARG00000070553 1743 1.6 - 0.864 - - - - 0.736 - - RNA (guanine-7-) methyltransferase [Source:ZFIN;Acc:ZDB-GENE-041008-25]
22. BX470254.1_1 ENSDARG00000097402 50 1.591 - - - - - 0.758 0.833 - -
23. arhgap27 ENSDARG00000104255 439 1.589 - - - - - 0.879 0.710 - - Rho GTPase activating protein 27 [Source:ZFIN;Acc:ZDB-GENE-030131-3922]
24. plk4 ENSDARG00000004576 688 1.586 - - - - - 0.739 0.847 - - polo-like kinase 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030619-14]
25. BX088524.2 ENSDARG00000103268 564 1.586 - - - - - 0.749 0.837 - -
26. dennd5a ENSDARG00000017006 3426 1.584 - 0.710 - - - - 0.874 - - DENN/MADD domain containing 5A [Source:ZFIN;Acc:ZDB-GENE-071211-1]
27. gpr157 ENSDARG00000034975, ENSDARG00000115075 61 1.573 - - - - - 0.750 0.823 - - G protein-coupled receptor 157 [Source:ZFIN;Acc:ZDB-GENE-050809-126]
28. pparaa ENSDARG00000031777 216 1.572 - 0.735 - - - - 0.837 - - peroxisome proliferator-activated receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-041210-169]
29. akap6 ENSDARG00000077295 1382 1.571 - 0.793 - - - 0.778 - - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
30. tmem204 ENSDARG00000045273 42 1.568 - 0.715 - - - - 0.853 - - transmembrane protein 204 [Source:ZFIN;Acc:ZDB-GENE-040724-12]
31. gxylt2 ENSDARG00000044191, ENSDARG00000114372 966 1.566 - 0.822 - - - 0.744 - - - glucoside xylosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070424-64]
32. klhl17 ENSDARG00000037324, ENSDARG00000115666 442 1.562 - 0.787 - - - 0.775 - - - kelch-like family member 17 [Source:ZFIN;Acc:ZDB-GENE-030131-8131]
33. gle1 ENSDARG00000043559 1362 1.56 - - - - - 0.773 0.787 - - GLE1 RNA export mediator homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040831-4]
34. ccdc12 ENSDARG00000023003, ENSDARG00000113770 1731 1.558 - 0.806 - - - - 0.752 - - coiled-coil domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-040801-108]
35. MSL1_1 MSL1_1 2365 1.551 - - - - - 0.735 0.816 - -
36. stk11ip ENSDARG00000070122, ENSDARG00000111986 199 1.549 - 0.764 - - - - 0.785 - - serine/threonine kinase 11 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-1022]
37. kctd2 ENSDARG00000025875, ENSDARG00000114216 802 1.547 - - - - - 0.782 0.765 - - potassium channel tetramerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-85]
38. lrrc8a lrrc8a 674 1.545 - 0.707 - - - - 0.838 - -
39. NUDT12 ENSDARG00000100813 378 1.535 - - 0.744 - - - 0.791 - - nudix (nucleoside diphosphate linked moiety X)-type motif 12 [Source:ZFIN;Acc:ZDB-GENE-050417-164]
40. CU013533.1 CU013533.1 108 1.531 - 0.822 - - - 0.709 - - -
41. C8H1orf194 C8H1orf194 111 1.53 - 0.808 - - - 0.722 - - -
42. tmem201 ENSDARG00000077307 453 1.529 - - - - - 0.726 0.803 - - transmembrane protein 201 [Source:ZFIN;Acc:ZDB-GENE-070410-61]
43. ELMO2 ENSDARG00000063527 301 1.514 - 0.801 - - - 0.713 - - - engulfment and cell motility 2 [Source:ZFIN;Acc:ZDB-GENE-140106-84]
44. MALSU1 MALSU1 1251 1.507 - - - - - 0.805 0.702 - -
45. zcchc10 ENSDARG00000091092 1333 1.501 - - - - - 0.700 0.801 - - zinc finger, CCHC domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-6172]
46. spop ENSDARG00000100519 177 1.493 0.721 0.772 - - - - - - - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
47. fam110b ENSDARG00000088073 420 1.49 - 0.762 - - - 0.728 - - - family with sequence similarity 110, member B [Source:ZFIN;Acc:ZDB-GENE-050626-70]
48. pld1a ENSDARG00000056228 765 1.489 - 0.721 - - - 0.768 - - - phospholipase D1a [Source:ZFIN;Acc:ZDB-GENE-031002-2]
49. flrt3 ENSDARG00000076895 3516 1.488 - 0.707 - - - 0.781 - - - fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
50. b4galt7 ENSDARG00000021899 546 1.482 - - - - - 0.756 0.726 - - xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-040727-3]
51. CT030712.1 ENSDARG00000044355 83 1.48 - 0.705 - - - 0.775 - - - uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
52. dpp6b ENSDARG00000024744 234 1.477 - 0.714 - - - 0.763 - - - dipeptidyl-peptidase 6b [Source:ZFIN;Acc:ZDB-GENE-070705-88]
53. mlf1 ENSDARG00000077301 789 1.469 0.706 0.763 - - - - - - - myeloid leukemia factor 1 [Source:ZFIN;Acc:ZDB-GENE-080917-7]
54. igfbp1a ENSDARG00000099351 1717 1.466 - 0.718 - - - 0.748 - - - insulin-like growth factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-021231-1]
55. sdr42e1 ENSDARG00000098838 25 1.461 - 0.713 - - - 0.748 - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:ZFIN;Acc:ZDB-GENE-051120-63]
56. cacna1sb ENSDARG00000042552 1320 1.455 - 0.736 - - - - - 0.719 - calcium channel, voltage-dependent, L type, alpha 1S subunit, b [Source:ZFIN;Acc:ZDB-GENE-051227-1]
57. ercc1 ENSDARG00000031680 900 1.44 - 0.712 - - - - 0.728 - - excision repair cross-complementation group 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2606]
58. C20H6orf211 C20H6orf211 529 1.44 - - - - - 0.721 0.719 - -
59. rprd1b ENSDARG00000038113 1105 1.44 - 0.728 - - - - 0.712 - - regulation of nuclear pre-mRNA domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-030131-355]
60. usp28 ENSDARG00000008880 1850 1.439 - 0.703 - - - - - 0.736 - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
61. MZT1 ENSDARG00000096668 2514 1.436 0.720 - - - - - 0.716 - - mitotic spindle organizing protein 1 [Source:HGNC Symbol;Acc:HGNC:33830]
62. haus5 ENSDARG00000019156 681 1.432 0.726 - - - - - 0.706 - - HAUS augmin-like complex, subunit 5 [Source:ZFIN;Acc:ZDB-GENE-041114-150]
63. CELF6 ENSDARG00000101933 228 1.426 - 0.715 - - - 0.711 - - - CUGBP Elav-like family member 6 [Source:HGNC Symbol;Acc:HGNC:14059]
64. ptgs2a ENSDARG00000004539 1207 1.423 - - - - - 0.704 0.719 - - prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
65. si:dkey-182g1.2 ENSDARG00000052680, ENSDARG00000109368 147 0.948 - - - - - - 0.948 - - si:dkey-182g1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-619]
66. si:ch211-166e11.5 ENSDARG00000100407 576 0.938 - - - - - - 0.938 - - si:ch211-166e11.5 [Source:ZFIN;Acc:ZDB-GENE-070912-142]
67. TIMM22 ENSDARG00000091413 957 0.936 - - - - - - 0.936 - - translocase of inner mitochondrial membrane 22 [Source:HGNC Symbol;Acc:HGNC:17317]
68. mob1a_1 ENSDARG00000102320, ENSDARG00000111884, ENSDARG00000116249 91 0.934 - - - - - - 0.934 - - MOB kinase activator 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6506]
69. ncbp2 ENSDARG00000014898 232 0.932 - - - - - - 0.932 - - nuclear cap binding protein subunit 2 [Source:ZFIN;Acc:ZDB-GENE-020419-31]
70. acot13 ENSDARG00000061728, ENSDARG00000114746 516 0.931 - - - - - - 0.931 - - acyl-CoA thioesterase 13 [Source:ZFIN;Acc:ZDB-GENE-060503-437]
71. si:dkey-17e16.17 615 0.929 - - - - - - 0.929 - - si:dkey-17e16.17
72. U3 U3 287 0.929 - - - - - - 0.929 - -
73. fntb ENSDARG00000027916 736 0.929 - - - - - - 0.929 - - farnesyltransferase, CAAX box, beta [Source:ZFIN;Acc:ZDB-GENE-030131-2220]
74. bcl2l10 ENSDARG00000026766 1426 0.927 - - - - - - 0.927 - - BCL2 like 10 [Source:ZFIN;Acc:ZDB-GENE-030825-2]
75. slc38a6 ENSDARG00000054312 112 0.927 - - - - - - 0.927 - - solute carrier family 38, member 6 [Source:ZFIN;Acc:ZDB-GENE-050522-51]
76. rxrbb ENSDARG00000002006, ENSDARG00000117079 1975 0.926 - - - - - - 0.926 - - retinoid x receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-990415-242]
77. BX296557.2 BX296557.2 1083 0.925 - - - - - - 0.925 - -
78. esrrga ENSDARG00000004861 805 0.923 - - - - - - 0.923 - - estrogen-related receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-030821-2]
79. si:ch211-259i2.2 si:ch211-259i2.2 45 0.922 - - - - - - 0.922 - -
80. extl2 ENSDARG00000063191 118 0.92 - - - - - - 0.920 - - exostosin-like glycosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1122]
81. CU655970.1 CU655970.1 2123 0.917 - - - - - - 0.917 - -
82. eif4enif1 ENSDARG00000016177 238 0.917 - - - - - - 0.917 - - eukaryotic translation initiation factor 4E nuclear import factor 1 [Source:ZFIN;Acc:ZDB-GENE-050320-113]
83. klhl41a ENSDARG00000068888 1034 0.917 - - - - - - 0.917 - - kelch-like family member 41a [Source:ZFIN;Acc:ZDB-GENE-081105-22]
84. nudt17 ENSDARG00000008014 479 0.916 - - - - - - 0.916 - - nudix (nucleoside diphosphate linked moiety X)-type motif 17 [Source:ZFIN;Acc:ZDB-GENE-050913-50]
85. lpar6b ENSDARG00000069441 65 0.916 - - - - - - 0.916 - - lysophosphatidic acid receptor 6b [Source:ZFIN;Acc:ZDB-GENE-110408-67]
86. si:ch211-219f7.3 si:ch211-219f7.3 48 0.914 - - - - - - 0.914 - -
87. smg8 ENSDARG00000061378 1164 0.913 - - - - - - 0.913 - - SMG8 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-091204-279]
88. KANSL1_1 KANSL1_1 1809 0.913 - - - - - - 0.913 - -
89. si:ch211-87m7.2 ENSDARG00000030129 223 0.912 - - - - - - 0.912 - - si:ch211-87m7.2 [Source:ZFIN;Acc:ZDB-GENE-120215-153]
90. zgc:136439 ENSDARG00000009267 720 0.912 - - - - - - 0.912 - - zgc:136439 [Source:ZFIN;Acc:ZDB-GENE-060421-2858]
91. ZBTB11 ENSDARG00000017886 817 0.912 - - - - - - 0.912 - - zinc finger and BTB domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5055]
92. fubp3 ENSDARG00000086896 21 0.912 - - - - - - 0.912 - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
93. dnph1 ENSDARG00000075730 403 0.912 - - - - - - 0.912 - - 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-5]
94. dhrs13l1 ENSDARG00000098746 102 0.912 - - - - - - 0.912 - - dehydrogenase/reductase (SDR family) member 13 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1907]
95. prkcba ENSDARG00000008723, ENSDARG00000116813 30 0.911 - - - - - - 0.911 - - protein kinase C, beta a [Source:ZFIN;Acc:ZDB-GENE-040426-1354]
96. si:ch211-284o19.8 ENSDARG00000053836 43 0.911 - - - - - - 0.911 - - si:ch211-284o19.8 [Source:ZFIN;Acc:ZDB-GENE-070912-289]
97. spsb3a ENSDARG00000077737 527 0.911 - - - - - - 0.911 - - splA/ryanodine receptor domain and SOCS box containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-4182]
98. SLC29A2 ENSDARG00000001767, ENSDARG00000115816 1392 0.911 - - - - - - 0.911 - - solute carrier family 29 (equilibrative nucleoside transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-050220-15]
99. tnfb ENSDARG00000013598 94 0.911 - - - - - - 0.911 - - tumor necrosis factor b (TNF superfamily, member 2) [Source:ZFIN;Acc:ZDB-GENE-050601-2]
100. CT030012.1 ENSDARG00000105611 154 0.911 - - - - - - 0.911 - -

There are 1743 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA