Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for polr1a

Gene Name Gene ID Reads Annotation
polr1a ENSDARG00000098375 1224 RNA polymerase I subunit A [Source:ZFIN;Acc:ZDB-GENE-030131-5286]










Genes with expression patterns similar to polr1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. polr1a ENSDARG00000098375 1224 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA polymerase I subunit A [Source:ZFIN;Acc:ZDB-GENE-030131-5286]
2. timm8b ENSDARG00000055708 7291 2.465 - 0.764 - 0.951 - - 0.750 - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
3. ipo4 ENSDARG00000041493 1578 2.231 - 0.816 - - - 0.708 0.707 - - importin 4 [Source:ZFIN;Acc:ZDB-GENE-041014-307]
4. si:dkey-156k2.6 si:dkey-156k2.6 848 1.823 - - - 0.997 - 0.826 - - -
5. prkrip1 ENSDARG00000033126, ENSDARG00000113803 1634 1.801 - 0.805 - 0.996 - - - - - PRKR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-111011-2]
6. tjp1a ENSDARG00000077506 2658 1.798 - 0.803 - 0.995 - - - - - tight junction protein 1a [Source:ZFIN;Acc:ZDB-GENE-031001-2]
7. fzr1 fzr1 2984 1.79 - 0.798 - 0.992 - - - - -
8. trdn ENSDARG00000041779 4283 1.79 - 0.799 - 0.991 - - - - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
9. pa2g4b ENSDARG00000070657 7999 1.78 - 0.838 - 0.942 - - - - - proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
10. tsen2 ENSDARG00000091851 1467 1.779 - 0.782 - 0.997 - - - - - TSEN2 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-060929-918]
11. PAPD5 2090 1.774 - 0.781 - 0.993 - - - - - PAP associated domain containing 5, transcript variant X1
12. brd7 ENSDARG00000008380 3654 1.767 - 0.779 - 0.988 - - - - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
13. snrpe ENSDARG00000033175 7462 1.763 - 0.806 - 0.957 - - - - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
14. eftud2 ENSDARG00000012261 3081 1.746 - 0.775 - 0.971 - - - - - elongation factor Tu GTP binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1569]
15. cdkal1 ENSDARG00000104848 2102 1.743 - 0.750 - 0.993 - - - - - CDK5 regulatory subunit associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1443]
16. txlnbb ENSDARG00000076241 6396 1.742 - 0.854 - 0.888 - - - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
17. nmt1a ENSDARG00000052966 5918 1.741 - 0.763 - 0.978 - - - - - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
18. nr1d2b ENSDARG00000009594 1144 1.735 - - - 0.997 - - - 0.738 - nuclear receptor subfamily 1, group D, member 2b [Source:ZFIN;Acc:ZDB-GENE-990415-244]
19. zic4 ENSDARG00000031307 1228 1.723 - 0.728 - 0.995 - - - - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
20. efnb3b ENSDARG00000042277 5823 1.706 - 0.769 - 0.937 - - - - - ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
21. nol12 ENSDARG00000038027 2288 1.695 - 0.701 - 0.994 - - - - - nucleolar protein 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1035]
22. nop2 ENSDARG00000043304 2511 1.695 - 0.701 - 0.994 - - - - - NOP2 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-050309-7]
23. ndufs6 ENSDARG00000056583 7220 1.686 - - - 0.984 - - 0.702 - - NADH:ubiquinone oxidoreductase subunit S6 [Source:ZFIN;Acc:ZDB-GENE-040912-86]
24. tti1 ENSDARG00000004114 203 1.646 - - - - - - 0.882 0.764 - TELO2 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-080819-3]
25. gak ENSDARG00000090654 695 1.642 - - - - - - 0.745 0.897 - cyclin G associated kinase [Source:ZFIN;Acc:ZDB-GENE-041210-358]
26. slc25a26 ENSDARG00000058208, ENSDARG00000110562, ENSDARG00000111558 584 1.617 - 0.810 - - - 0.807 - - - solute carrier family 25 (S-adenosylmethionine carrier), member 26 [Source:ZFIN;Acc:ZDB-GENE-050913-126]
27. ddx49 ENSDARG00000012899 1604 1.615 - 0.787 - - - - 0.828 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
28. plecb ENSDARG00000021987 13621 1.595 0.726 0.869 - - - - - - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
29. lamb2 ENSDARG00000002084 3265 1.58 0.738 0.842 - - - - - - - laminin, beta 2 (laminin S) [Source:ZFIN;Acc:ZDB-GENE-081030-4]
30. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 1.573 - 0.871 - - - - 0.702 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
31. celf2 ENSDARG00000002131, ENSDARG00000110267 15605 1.57 - 0.757 - 0.813 - - - - - cugbp, Elav-like family member 2 [Source:ZFIN;Acc:ZDB-GENE-030826-35]
32. hspg2 ENSDARG00000076564 3440 1.568 - 0.860 - - - - 0.708 - - heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]
33. PYURF ENSDARG00000045773 4576 1.564 - 0.745 - - - - 0.819 - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
34. CABZ01090021.1 CABZ01090021.1 655 1.561 0.792 0.769 - - - - - - -
35. mrps15 ENSDARG00000109289 3258 1.559 - 0.793 - - - - 0.766 - - mitochondrial ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-040718-188]
36. wdr43 ENSDARG00000077264 1992 1.545 0.763 0.782 - - - - - - - WD repeat domain 43 [Source:ZFIN;Acc:ZDB-GENE-021231-3]
37. arpp21 ENSDARG00000061081 892 1.532 - 0.800 - - - - 0.732 - - cAMP-regulated phosphoprotein, 21 [Source:ZFIN;Acc:ZDB-GENE-081104-296]
38. MYOM3 2720 1.526 0.759 0.767 - - - - - - - myomesin 3, transcript variant X2
39. rtn2b ENSDARG00000057027 1391 1.526 0.706 0.820 - - - - - - - reticulon 2b [Source:ZFIN;Acc:ZDB-GENE-060331-95]
40. avpr2ab ENSDARG00000029219 97 1.522 - - - - - 0.758 - 0.764 - arginine vasopressin receptor 2a, duplicate b [Source:ZFIN;Acc:ZDB-GENE-110411-48]
41. hsd17b10 ENSDARG00000017781 1793 1.517 - 0.816 - - - - 0.701 - - hydroxysteroid (17-beta) dehydrogenase 10 [Source:ZFIN;Acc:ZDB-GENE-041010-201]
42. enah ENSDARG00000032049 1526 1.513 - 0.799 - - - - 0.714 - - enabled homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010323-11]
43. hfe2 4113 1.507 - 0.780 - - - - - 0.727 - hemochromatosis type 2
44. BX511021.1 ENSDARG00000073936 647 1.505 - 0.785 - - - - 0.720 - - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
45. fam173a ENSDARG00000041223, ENSDARG00000113102 639 1.504 - 0.736 - - - 0.768 - - - family with sequence similarity 173, member A [Source:ZFIN;Acc:ZDB-GENE-040625-59]
46. xirp1 ENSDARG00000030722 1486 1.503 - 0.768 - - - - - 0.735 - xin actin binding repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-050221-2]
47. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 1.501 - 0.743 - - - - 0.758 - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
48. mrps9 ENSDARG00000061505 1636 1.496 - 0.755 - - - - 0.741 - - mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
49. pdlim3b ENSDARG00000014248, ENSDARG00000111275 708 1.493 0.726 0.767 - - - - - - - PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104]
50. txn2 ENSDARG00000034777 4071 1.486 - 0.735 - - - - 0.751 - - thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
51. BCKDHB ENSDARG00000014676 3725 1.481 - 0.749 - - - - 0.732 - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
52. lama4 ENSDARG00000020785 1522 1.475 - 0.714 - - - - 0.761 - - laminin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040724-213]
53. notum2 ENSDARG00000088411 823 1.474 0.754 0.720 - - - - - - - notum pectinacetylesterase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-77]
54. tns1 tns1 5891 1.469 - 0.752 - - - - 0.717 - -
55. vwde ENSDARG00000103443 5758 1.469 0.746 0.723 - - - - - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
56. heatr3 ENSDARG00000036076 944 1.469 0.728 - - - - - 0.741 - - HEAT repeat containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1876]
57. mrpl20 ENSDARG00000090462 791 1.467 - 0.722 - - - - 0.745 - - mitochondrial ribosomal protein L20 [Source:ZFIN;Acc:ZDB-GENE-030131-5299]
58. si:dkeyp-72g6.2 si:dkeyp-72g6.2 121 1.465 - 0.704 - - - 0.761 - - -
59. cacna2d3 ENSDARG00000078760 211 1.463 - 0.717 - - - - - 0.746 - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
60. zgc:109949 ENSDARG00000103413 426 1.458 - 0.710 - - - - 0.748 - - zgc:109949 [Source:ZFIN;Acc:ZDB-GENE-050522-166]
61. pygmb ENSDARG00000013317 5454 1.446 - 0.735 - - - - 0.711 - - phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
62. mrpl12 ENSDARG00000038768 5539 1.426 0.726 0.700 - - - - - - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
63. pa2g4a ENSDARG00000039578, ENSDARG00000115881 16166 1.42 - 0.701 - - - - 0.719 - - proliferation-associated 2G4, a [Source:ZFIN;Acc:ZDB-GENE-030616-161]
64. pvrl3l pvrl3l 943 1.417 - 0.709 - - - - 0.708 - -
65. smim8 ENSDARG00000071040 622 1.416 - - - - - - 0.701 0.715 - small integral membrane protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-423]
66. tgfb1b ENSDARG00000034895 608 0.997 - - - 0.997 - - - - - transforming growth factor, beta 1b [Source:ZFIN;Acc:ZDB-GENE-091028-1]
67. ccdc102a ENSDARG00000003872 791 0.997 - - - 0.997 - - - - - coiled-coil domain containing 102A [Source:ZFIN;Acc:ZDB-GENE-030131-4044]
68. unc5b ENSDARG00000033327 3432 0.997 - - - 0.997 - - - - - unc-5 netrin receptor B [Source:ZFIN;Acc:ZDB-GENE-041213-1]
69. rhoua ENSDARG00000019709 1506 0.997 - - - 0.997 - - - - - ras homolog family member Ua [Source:ZFIN;Acc:ZDB-GENE-040618-3]
70. gpatch1 ENSDARG00000033418 1349 0.997 - - - 0.997 - - - - - G patch domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040914-65]
71. ccnl1a ENSDARG00000055124, ENSDARG00000116311 2174 0.997 - - - 0.997 - - - - - cyclin L1a [Source:ZFIN;Acc:ZDB-GENE-050419-206]
72. si:dkeyp-82h4.2 si:dkeyp-82h4.2 494 0.997 - - - 0.997 - - - - -
73. polr3e ENSDARG00000037358 1864 0.997 - - - 0.997 - - - - - polymerase (RNA) III (DNA directed) polypeptide E [Source:ZFIN;Acc:ZDB-GENE-030131-8462]
74. PACS1_1 PACS1_1 1264 0.997 - - - 0.997 - - - - -
75. phf6 ENSDARG00000004046, ENSDARG00000115639 925 0.997 - - - 0.997 - - - - - PHD finger protein 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5278]
76. snx18a ENSDARG00000067713, ENSDARG00000109647 765 0.997 - - - 0.997 - - - - - sorting nexin 18a [Source:ZFIN;Acc:ZDB-GENE-070705-339]
77. lrrtm1 ENSDARG00000052713 1041 0.997 - - - 0.997 - - - - - leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
78. sept5a ENSDARG00000013843 1206 0.997 - - - 0.997 - - - - - septin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7868]
79. zgc:173702 ENSDARG00000110229 411 0.997 - - - 0.997 - - - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
80. WNK2 ENSDARG00000104989 429 0.997 - - - 0.997 - - - - - WNK lysine deficient protein kinase 2 [Source:ZFIN;Acc:ZDB-GENE-160114-3]
81. AL954698.1 ENSDARG00000098202 377 0.997 - - - 0.997 - - - - -
82. SNORA2 SNORA2 486 0.997 - - - 0.997 - - - - -
83. fam122b ENSDARG00000036500, ENSDARG00000116582 1408 0.997 - - - 0.997 - - - - - family with sequence similarity 122B [Source:ZFIN;Acc:ZDB-GENE-040801-204]
84. rb1 ENSDARG00000006782 1445 0.996 - - - 0.996 - - - - - retinoblastoma 1 [Source:ZFIN;Acc:ZDB-GENE-040428-1]
85. si:ch211-155e24.3 ENSDARG00000105127 972 0.996 - - - 0.996 - - - - - si:ch211-155e24.3 [Source:ZFIN;Acc:ZDB-GENE-070912-116]
86. insig1 ENSDARG00000010658, ENSDARG00000113413 1811 0.996 - - - 0.996 - - - - - insulin induced gene 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6121]
87. chga ENSDARG00000008829 1086 0.996 - - - 0.996 - - - - - chromogranin A [Source:ZFIN;Acc:ZDB-GENE-041010-161]
88. mcrs1 ENSDARG00000020840 3232 0.996 - - - 0.996 - - - - - microspherule protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2434]
89. fam102bb ENSDARG00000002333 1483 0.996 - - - 0.996 - - - - - family with sequence similarity 102, member B, b [Source:ZFIN;Acc:ZDB-GENE-041014-330]
90. BX323459.1 ENSDARG00000109508 1476 0.996 - - - 0.996 - - - - -
91. PPP1R8 PPP1R8 1897 0.995 - - - 0.995 - - - - -
92. tox4 tox4 1671 0.995 - - - 0.995 - - - - -
93. tcf3b ENSDARG00000099999, ENSDARG00000112646 3589 0.995 - - - 0.995 - - - - - transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-051113-64]
94. dap3 ENSDARG00000078500 2724 0.995 - - - 0.995 - - - - - death associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-051129-2]
95. nelfb ENSDARG00000035505 1337 0.995 - - - 0.995 - - - - - negative elongation factor complex member B [Source:ZFIN;Acc:ZDB-GENE-040426-765]
96. dnttip2 ENSDARG00000057648 2381 0.995 - - - 0.995 - - - - - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]
97. si:ch211-11k18.4 ENSDARG00000087869 3298 0.995 - - - 0.995 - - - - - si:ch211-11k18.4 [Source:ZFIN;Acc:ZDB-GENE-070912-22]
98. si:ch73-52f15.5 ENSDARG00000095400 1368 0.995 - - - 0.995 - - - - - si:ch73-52f15.5 [Source:ZFIN;Acc:ZDB-GENE-091204-341]
99. sirt6 ENSDARG00000102963 766 0.995 - - - 0.995 - - - - - sirtuin 6 [Source:ZFIN;Acc:ZDB-GENE-031007-2]
100. fgfr2 ENSDARG00000058115 6743 0.994 - - - 0.994 - - - - - fibroblast growth factor receptor 2 [Source:ZFIN;Acc:ZDB-GENE-030323-1]

There are 1295 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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