Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pggt1b

Gene Name Gene ID Reads Annotation
pggt1b ENSDARG00000103464 441 protein geranylgeranyltransferase type I, beta subunit [Source:ZFIN;Acc:ZDB-GENE-050913-85]










Genes with expression patterns similar to pggt1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pggt1b ENSDARG00000103464 441 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein geranylgeranyltransferase type I, beta subunit [Source:ZFIN;Acc:ZDB-GENE-050913-85]
2. pitpnb ENSDARG00000036005 513 2.364 - 0.718 - - - - 0.778 0.868 - phosphatidylinositol transfer protein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-895]
3. LENG8 ENSDARG00000076805, ENSDARG00000113326 4021 2.299 - 0.843 0.731 - - - - 0.725 - leukocyte receptor cluster (LRC) member 8 [Source:ZFIN;Acc:ZDB-GENE-070410-6]
4. clip2 ENSDARG00000059596 529 1.81 - - - - 0.832 - - 0.978 - CAP-GLY domain containing linker protein 2 [Source:ZFIN;Acc:ZDB-GENE-100727-3]
5. CU693494.3 CU693494.3 169 1.796 - - - - 0.833 - - 0.963 -
6. CABZ01088061.1 CABZ01088061.1 695 1.774 - - - - - - 0.823 0.951 -
7. ndc1 ENSDARG00000021120 2417 1.76 - - - - - - 0.836 0.924 - NDC1 transmembrane nucleoporin [Source:ZFIN;Acc:ZDB-GENE-030131-7176]
8. CABZ01039859.1 ENSDARG00000076361 540 1.758 - - - - 0.816 - - 0.942 - beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
9. rab20 ENSDARG00000005049 346 1.751 - - - - - - 0.775 0.976 - RAB20, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-9143]
10. phf16 phf16 1116 1.742 - - - - - - 0.768 0.974 -
11. aars2 ENSDARG00000107385 190 1.732 - - - - 0.750 - - 0.982 - alanyl-tRNA synthetase 2, mitochondrial (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-213]
12. trpm1b ENSDARG00000103476 369 1.725 - - - - 0.752 - - 0.973 - transient receptor potential cation channel, subfamily M, member 1b [Source:ZFIN;Acc:ZDB-GENE-070424-31]
13. TRHDE_1 TRHDE_1 102 1.725 - - - - - - 0.759 0.966 -
14. zgc:158852 ENSDARG00000102076 65 1.719 - - - - 0.908 - 0.811 - - zgc:158852 [Source:ZFIN;Acc:ZDB-GENE-070112-972]
15. CABZ01081749.1 CABZ01081749.1 637 1.714 - - - - - - 0.785 0.929 -
16. lrrc32 ENSDARG00000040621 348 1.71 - - - - 0.877 - 0.833 - - leucine rich repeat containing 32 [Source:ZFIN;Acc:ZDB-GENE-090630-1]
17. arhgef16 ENSDARG00000077114 759 1.707 - - - - 0.832 - - 0.875 - Rho guanine nucleotide exchange factor (GEF) 16 [Source:ZFIN;Acc:ZDB-GENE-081104-446]
18. CU929119.2 CU929119.2 859 1.706 - - - - - - 0.766 0.940 -
19. atl1 ENSDARG00000060481 251 1.685 0.746 - - - - - - 0.939 - atlastin GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8003]
20. nipa2 ENSDARG00000055912 1574 1.676 - - - - 0.817 - 0.859 - - NIPA magnesium transporter 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2134]
21. sdr16c5b ENSDARG00000017794 970 1.67 - 0.804 - - - - 0.866 - - short chain dehydrogenase/reductase family 16C, member 5b [Source:ZFIN;Acc:ZDB-GENE-040426-2861]
22. scaf4b ENSDARG00000018854 734 1.667 - 0.701 - - - - - 0.966 - SR-related CTD-associated factor 4b [Source:ZFIN;Acc:ZDB-GENE-050506-42]
23. gpsm2 ENSDARG00000017311, ENSDARG00000113810 1001 1.658 - - - - - - 0.825 0.833 - G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1169]
24. ahi1 ENSDARG00000044056 951 1.655 0.725 - - - - - - 0.930 - Abelson helper integration site 1 [Source:ZFIN;Acc:ZDB-GENE-060803-1]
25. rfc5 ENSDARG00000035634 974 1.64 - - - - - - 0.781 0.859 - replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
26. BX569781.3 BX569781.3 576 1.637 - - - - - - 0.805 0.832 -
27. znf598 ENSDARG00000014945 1838 1.636 - 0.706 - - - - - 0.930 - zinc finger protein 598 [Source:ZFIN;Acc:ZDB-GENE-060602-3]
28. chsy1 ENSDARG00000079027 455 1.635 - - - - - - 0.780 0.855 - chondroitin sulfate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3127]
29. rspry1 ENSDARG00000062558 1424 1.632 - - - - - - 0.757 0.875 - ring finger and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061026-2]
30. spc25 ENSDARG00000078433 1316 1.621 - 0.795 - - - - 0.826 - - SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060810-13]
31. efna5a ENSDARG00000089790 1007 1.62 - - - - - - 0.791 0.829 - ephrin-A5a [Source:ZFIN;Acc:ZDB-GENE-001128-1]
32. mir457b 21 1.614 - - 0.707 - 0.907 - - - - microRNA 457b
33. stk16 ENSDARG00000037777 255 1.614 - - - - - - 0.730 0.884 - serine/threonine kinase 16 [Source:ZFIN;Acc:ZDB-GENE-050417-102]
34. ugp2b ENSDARG00000008200, ENSDARG00000110864 1516 1.608 - - - - 0.849 - - 0.759 - UDP-glucose pyrophosphorylase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6352]
35. sult6b1 ENSDARG00000086826 2070 1.606 - - - - - - 0.759 0.847 - sulfotransferase family, cytosolic, 6b, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-228]
36. NEDD4 NEDD4 2040 1.603 - 0.740 - - - - 0.863 - -
37. hdac4 ENSDARG00000098349 1370 1.598 - 0.787 - - 0.811 - - - - histone deacetylase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-95]
38. rnf144aa ENSDARG00000020600 768 1.596 - - - - 0.807 - 0.789 - - ring finger protein 144aa [Source:ZFIN;Acc:ZDB-GENE-041001-88]
39. lgalsla ENSDARG00000059060 512 1.591 - - - - 0.847 - 0.744 - - lectin, galactoside-binding-like a [Source:ZFIN;Acc:ZDB-GENE-060616-24]
40. casp9 ENSDARG00000004325 306 1.576 - - - - 0.792 - 0.784 - - caspase 9, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-5]
41. tmem168a ENSDARG00000068705 498 1.568 - - - - - 0.717 0.851 - - transmembrane protein 168a [Source:ZFIN;Acc:ZDB-GENE-050419-97]
42. HDAC5 ENSDARG00000075139 1287 1.566 - - - - - 0.701 0.865 - - histone deacetylase 5 [Source:ZFIN;Acc:ZDB-GENE-121219-3]
43. DCUN1D3 ENSDARG00000011493 319 1.559 - - - - 0.848 - - 0.711 - defective in cullin neddylation 1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070928-2]
44. tmub1 ENSDARG00000038787 1012 1.558 - 0.709 - - - - 0.849 - - transmembrane and ubiquitin-like domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2504]
45. ubl3b ENSDARG00000021556 1210 1.557 - 0.707 - - - - - 0.850 - ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
46. gnpnat1 ENSDARG00000039892 709 1.553 - - - - 0.759 - - 0.794 - glucosamine-phosphate N-acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-450]
47. ikbkb ENSDARG00000079123 498 1.552 - - - - - - 0.735 0.817 - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
48. HEATR6 ENSDARG00000073686 241 1.552 0.717 - - - - - 0.835 - - HEAT repeat containing 6 [Source:ZFIN;Acc:ZDB-GENE-080204-118]
49. zgc:109986 ENSDARG00000102608 348 1.552 0.837 0.715 - - - - - - - zgc:109986 [Source:ZFIN;Acc:ZDB-GENE-050522-136]
50. PAX7 PAX7 1658 1.551 0.759 - - - - - - 0.792 -
51. gstm3 gstm3 1164 1.55 - - - - 0.844 - 0.706 - -
52. plekhf1 ENSDARG00000102435, ENSDARG00000110694 314 1.529 - - - - 0.733 - 0.796 - - pleckstrin homology domain containing, family F (with FYVE domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1289]
53. uros ENSDARG00000027491 1147 1.515 - 0.726 - - - - 0.789 - - uroporphyrinogen III synthase [Source:ZFIN;Acc:ZDB-GENE-040323-2]
54. nfe2l1b ENSDARG00000076533, ENSDARG00000114820 1574 1.515 - 0.783 - - - - 0.732 - - nuclear factor, erythroid 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-120319-2]
55. TAF2 ENSDARG00000102307 1401 1.51 - 0.721 - - 0.789 - - - - TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
56. dnaja3a ENSDARG00000058494, ENSDARG00000111151 2497 1.509 - 0.703 - - - - - 0.806 - DnaJ (Hsp40) homolog, subfamily A, member 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7837]
57. selk 954 1.501 - 0.789 - - - - 0.712 - - selenoprotein K
58. alox5 alox5 406 1.488 - 0.732 - - - - 0.756 - -
59. dnmbp ENSDARG00000074121 2711 1.478 - 0.711 - - - - 0.767 - - dynamin binding protein [Source:ZFIN;Acc:ZDB-GENE-101026-2]
60. mlec ENSDARG00000059630 2057 1.47 - 0.735 - - - - 0.735 - - malectin [Source:ZFIN;Acc:ZDB-GENE-081105-187]
61. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.462 - - - - 0.716 - 0.746 - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
62. si:dkey-18f7.2 si:dkey-18f7.2 895 1.456 - 0.729 - - - - - 0.727 -
63. c7a ENSDARG00000042172 716 1.453 - 0.702 - - - - - 0.751 - complement component 7a [Source:ZFIN;Acc:ZDB-GENE-081104-392]
64. slc35a4 ENSDARG00000062379 1088 1.453 - 0.714 - - 0.739 - - - - solute carrier family 35, member A4 [Source:ZFIN;Acc:ZDB-GENE-061103-595]
65. slc38a5b ENSDARG00000014587 8461 1.453 - 0.741 - - - - 0.712 - - solute carrier family 38, member 5b [Source:ZFIN;Acc:ZDB-GENE-040718-395]
66. slc30a5 ENSDARG00000051921 1113 1.442 - - - - - - 0.729 0.713 - solute carrier family 30 (zinc transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-040718-6]
67. plcb3 ENSDARG00000068246 789 1.442 - 0.733 - - - - 0.709 - - phospholipase C, beta 3 (phosphatidylinositol-specific) [Source:ZFIN;Acc:ZDB-GENE-030616-594]
68. pacs1a ENSDARG00000044556, ENSDARG00000117043 914 1.44 - 0.735 - - - - 0.705 - - phosphofurin acidic cluster sorting protein 1a [Source:ZFIN;Acc:ZDB-GENE-050208-244]
69. mych ENSDARG00000077473 911 1.44 - - 0.718 - - 0.722 - - - myelocytomatosis oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-030219-51]
70. si:dkeyp-55f12.3 ENSDARG00000042345 1812 1.421 - - - - 0.701 - - 0.720 - si:dkeyp-55f12.3 [Source:ZFIN;Acc:ZDB-GENE-041001-118]
71. ankzf1 ENSDARG00000041904 917 1.415 - - - 0.713 - - 0.702 - - ankyrin repeat and zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050309-80]
72. sec23ip ENSDARG00000061413 804 1.407 - - 0.703 - - - 0.704 - - SEC23 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5259]
73. mknk1 ENSDARG00000018411 749 0.986 - - - - - - - 0.986 - MAP kinase interacting serine/threonine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080220-11]
74. si:ch211-106h4.9 ENSDARG00000075706 36 0.985 - - - - - - - 0.985 - si:ch211-106h4.9 [Source:ZFIN;Acc:ZDB-GENE-070705-17]
75. si:dkey-29n10.3 si:dkey-29n10.3 66 0.985 - - - - - - - 0.985 -
76. si:ch73-67c22.3 si:ch73-67c22.3 30 0.984 - - - - - - - 0.984 -
77. FCHSD2 FCHSD2 35 0.984 - - - - - - - 0.984 -
78. BX682234.2 BX682234.2 28 0.984 - - - - - - - 0.984 -
79. CR936337.1 CR936337.1 38 0.984 - - - - - - - 0.984 -
80. JAKMIP3 ENSDARG00000100708 56 0.984 - - - - - - - 0.984 - Janus kinase and microtubule interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-100914-6]
81. CABZ01087562.1 CABZ01087562.1 80 0.984 - - - - - - - 0.984 -
82. lrrc4ba ENSDARG00000004597, ENSDARG00000112893 72 0.984 - - - - - - - 0.984 - leucine rich repeat containing 4Ba [Source:ZFIN;Acc:ZDB-GENE-080327-25]
83. fam63b 484 0.984 - - - - - - - 0.984 - family with sequence similarity 63, member B
84. htra3a ENSDARG00000052895 28 0.983 - - - - - - - 0.983 - HtrA serine peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-040801-245]
85. sv2ba ENSDARG00000057427 33 0.983 - - - - - - - 0.983 - synaptic vesicle glycoprotein 2Ba [Source:ZFIN;Acc:ZDB-GENE-070209-134]
86. mlh1 ENSDARG00000025948 130 0.983 - - - - - - - 0.983 - mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]
87. gcdhl gcdhl 38 0.983 - - - - - - - 0.983 -
88. CR848836.5 CR848836.5 42 0.983 - - - - - - - 0.983 -
89. si:ch211-67e16.2 41 0.983 - - - - - - - 0.983 - si:ch211-67e16.2, transcript variant X2
90. si:busm1-105l16.2 ENSDARG00000070858, ENSDARG00000114184 199 0.982 - - - - - - - 0.982 - si:busm1-105l16.2 [Source:ZFIN;Acc:ZDB-GENE-030616-108]
91. rad23aa ENSDARG00000020001 374 0.982 - - - - - - - 0.982 - RAD23 homolog A, nucleotide excision repair protein a [Source:ZFIN;Acc:ZDB-GENE-040808-59]
92. styx ENSDARG00000057699 48 0.982 - - - - - - - 0.982 - serine/threonine/tyrosine interacting protein [Source:ZFIN;Acc:ZDB-GENE-050522-45]
93. si:ch211-254c8.2 233 0.982 - - - - - - - 0.982 - si:ch211-254c8.2, transcript variant X4
94. dnah9l ENSDARG00000062630 268 0.982 - - - - - - - 0.982 - dynein, axonemal, heavy polypeptide 9 like [Source:ZFIN;Acc:ZDB-GENE-050506-1]
95. chrna2b ENSDARG00000057025 217 0.982 - - - - - - - 0.982 - cholinergic receptor, nicotinic, alpha 2b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-041001-99]
96. slc2a8 ENSDARG00000104278 764 0.981 - - - - - - - 0.981 - solute carrier family 2 (facilitated glucose transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-030829-25]
97. usp43a ENSDARG00000103494, ENSDARG00000111546, ENSDARG00000112146 211 0.981 - - - - - - - 0.981 - ubiquitin specific peptidase 43a [Source:ZFIN;Acc:ZDB-GENE-100211-1]
98. cx28.8 ENSDARG00000071042 62 0.981 - - - - - - - 0.981 - connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
99. CABZ01114089.1 CABZ01114089.1 127 0.98 - - - - - - - 0.980 -
100. si:dkey-11f4.16 ENSDARG00000099799 121 0.98 - - - - - - - 0.980 - si:dkey-11f4.16 [Source:ZFIN;Acc:ZDB-GENE-070912-357]

There are 1433 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA