Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pfdn6

Gene Name Gene ID Reads Annotation
pfdn6 ENSDARG00000037108 2083 prefoldin subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1589]










Genes with expression patterns similar to pfdn6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pfdn6 ENSDARG00000037108 2083 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 prefoldin subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1589]
2. nfs1 ENSDARG00000062237 2741 2.473 - 0.898 - - 0.773 - 0.802 - - NFS1 cysteine desulfurase [Source:ZFIN;Acc:ZDB-GENE-060405-1]
3. gspt1 ENSDARG00000031048, ENSDARG00000109388 2735 2.467 - 0.760 - - 0.788 - 0.919 - - G1 to S phase transition 1 [Source:ZFIN;Acc:ZDB-GENE-040822-36]
4. sra1 ENSDARG00000053619 2799 2.361 - 0.768 - - 0.793 - 0.800 - - steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
5. ahsa1 ahsa1 2012 2.347 - 0.785 - - - 0.716 0.846 - -
6. myoz2b ENSDARG00000037266 2139 2.335 - - - - 0.833 0.724 0.778 - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
7. oxct1a ENSDARG00000013063 1517 2.329 - - - 0.793 0.823 - 0.713 - - 3-oxoacid CoA transferase 1a [Source:ZFIN;Acc:ZDB-GENE-040723-3]
8. eprs ENSDARG00000060494 4729 2.302 0.718 0.815 - - - - 0.769 - - glutamyl-prolyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-638]
9. fam192a ENSDARG00000041631 4113 2.237 - - - - 0.769 0.743 0.725 - - family with sequence similarity 192, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6692]
10. tpi1a ENSDARG00000025012 562 1.692 - - - 0.861 0.831 - - - - triosephosphate isomerase 1a [Source:ZFIN;Acc:ZDB-GENE-020416-3]
11. eif2s1b ENSDARG00000052178 11961 1.674 - - - - - 0.842 0.832 - - eukaryotic translation initiation factor 2, subunit 1 alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-283]
12. chrnd ENSDARG00000019342 2728 1.653 - - - - 0.775 - 0.878 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
13. msrb3 ENSDARG00000045658 988 1.651 - 0.775 - - - - 0.876 - - methionine sulfoxide reductase B3 [Source:ZFIN;Acc:ZDB-GENE-040625-74]
14. nudt2 ENSDARG00000058728 371 1.62 - - - 0.818 0.802 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 2 [Source:ZFIN;Acc:ZDB-GENE-040718-7]
15. cwf19l2 ENSDARG00000091760 1372 1.612 - - - 0.787 0.825 - - - - CWF19-like 2, cell cycle control (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050913-1]
16. lrig1 ENSDARG00000075625 2027 1.604 - 0.748 - - - - 0.856 - - leucine-rich repeats and immunoglobulin-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-031113-23]
17. hspb9 ENSDARG00000078674 2755 1.603 - 0.828 - - - - 0.775 - - heat shock protein, alpha-crystallin-related, 9 [Source:ZFIN;Acc:ZDB-GENE-080214-6]
18. cxxc1 cxxc1 914 1.599 - 0.746 - - 0.853 - - - -
19. KIAA0355 3250 1.598 - 0.839 - - - 0.759 - - - KIAA0355 ortholog, transcript variant X1
20. sh3bgr ENSDARG00000021633 3498 1.596 - - - - - 0.718 0.878 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
21. immt ENSDARG00000102874 3435 1.593 - 0.843 - - - - 0.750 - - inner membrane protein, mitochondrial (mitofilin) [Source:ZFIN;Acc:ZDB-GENE-030131-5417]
22. ndufa8 ENSDARG00000058041, ENSDARG00000111900 5493 1.593 - - - - - 0.714 0.879 - - NADH:ubiquinone oxidoreductase subunit A8 [Source:ZFIN;Acc:ZDB-GENE-040426-1688]
23. synpo2lb ENSDARG00000078696 2361 1.589 - 0.763 - - - - 0.826 - - synaptopodin 2-like b [Source:ZFIN;Acc:ZDB-GENE-090828-5]
24. PTPLA PTPLA 4044 1.582 0.754 - - - - - 0.828 - -
25. nexn ENSDARG00000057317 10972 1.581 0.703 - - - - - 0.878 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
26. aimp2 ENSDARG00000018903 5797 1.581 - - - - - 0.739 0.842 - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2652]
27. pcdh18b ENSDARG00000052494, ENSDARG00000116134 1099 1.579 - - - - 0.843 - 0.736 - - protocadherin 18b [Source:ZFIN;Acc:ZDB-GENE-080804-1]
28. tspan12 ENSDARG00000032389 419 1.579 - - - 0.842 - - 0.737 - - tetraspanin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1285]
29. CABZ01080590.2 CABZ01080590.2 2038 1.573 - 0.744 - - - - 0.829 - -
30. BX323459.1 ENSDARG00000109508 1476 1.571 - - - - 0.843 - 0.728 - -
31. smtnl1 ENSDARG00000041257 7410 1.568 0.724 - - - - - 0.844 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
32. cacnb1 ENSDARG00000002167 1402 1.566 - - - 0.843 - - 0.723 - - calcium channel, voltage-dependent, beta 1 subunit [Source:ZFIN;Acc:ZDB-GENE-040718-399]
33. rpl37 ENSDARG00000034291, ENSDARG00000076360 13668 1.564 - - - - - 0.807 0.757 - - ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39]
34. asns ENSDARG00000016375 1606 1.564 0.739 - - - - - 0.825 - - asparagine synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1091]
35. wbscr16 wbscr16 791 1.563 - 0.730 - - 0.833 - - - -
36. psmb7 ENSDARG00000037962 11542 1.557 - 0.836 - - - - 0.721 - - proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
37. PRC1 PRC1 583 1.557 - - - - 0.849 0.708 - - -
38. tmem230a ENSDARG00000027687, ENSDARG00000109832 333 1.555 - - - 0.733 0.822 - - - - transmembrane protein 230a [Source:ZFIN;Acc:ZDB-GENE-040822-20]
39. rapsn ENSDARG00000041133, ENSDARG00000111358 1416 1.555 0.713 - - - - - 0.842 - - receptor-associated protein of the synapse, 43kD [Source:ZFIN;Acc:ZDB-GENE-030313-1]
40. snoU83B snoU83B 4666 1.555 - - - - - 0.823 0.732 - -
41. obsl1b ENSDARG00000077388 2511 1.551 - - - - - 0.732 0.819 - - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
42. ALDH1L2 ENSDARG00000070230 2550 1.55 - 0.746 - - - - 0.804 - - aldehyde dehydrogenase 1 family, member L2 [Source:ZFIN;Acc:ZDB-GENE-100426-6]
43. ablim2 ENSDARG00000055223 1934 1.549 - - - - 0.782 - 0.767 - - actin binding LIM protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-100316-5]
44. minos1 ENSDARG00000101619 5273 1.548 - 0.754 - - - - 0.794 - - mitochondrial inner membrane organizing system 1 [Source:ZFIN;Acc:ZDB-GENE-060825-325]
45. anxa6 ENSDARG00000013335 3588 1.546 - - - - - 0.732 0.814 - - annexin A6 [Source:ZFIN;Acc:ZDB-GENE-030707-3]
46. sar1ab ENSDARG00000033320 3984 1.539 0.709 - - - - - 0.830 - - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
47. psmd4a ENSDARG00000101295 1410 1.537 - - - - 0.815 - 0.722 - - proteasome 26S subunit, non-ATPase 4a [Source:ZFIN;Acc:ZDB-GENE-040625-104]
48. kcnma1a ENSDARG00000079840 2584 1.537 - - - - - 0.732 0.805 - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
49. dock7 ENSDARG00000078675 1995 1.536 - 0.773 - - 0.763 - - - - dedicator of cytokinesis 7 [Source:ZFIN;Acc:ZDB-GENE-050302-15]
50. si:ch211-120j21.1 si:ch211-120j21.1 638 1.532 - - - - 0.802 - 0.730 - -
51. reep1 ENSDARG00000014854 915 1.53 - - - - 0.794 - 0.736 - - receptor accessory protein 1 [Source:ZFIN;Acc:ZDB-GENE-110411-267]
52. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.53 - 0.750 - - - - 0.780 - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
53. eif2s2 ENSDARG00000053047 15904 1.53 - - - - - 0.706 0.824 - - eukaryotic translation initiation factor 2, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-030131-3085]
54. ST7 ENSDARG00000039960, ENSDARG00000112691 2020 1.528 - - - - 0.812 - 0.716 - - suppression of tumorigenicity 7 [Source:ZFIN;Acc:ZDB-GENE-060421-2807]
55. agla ENSDARG00000103811 2856 1.525 - - - - - 0.705 0.820 - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase a [Source:ZFIN;Acc:ZDB-GENE-071004-6]
56. ppp1r14bb ENSDARG00000030161 2349 1.524 - 0.775 - - - - 0.749 - - protein phosphatase 1, regulatory (inhibitor) subunit 14Bb [Source:ZFIN;Acc:ZDB-GENE-030616-595]
57. lpl ENSDARG00000087697 2578 1.524 - - - - 0.812 - 0.712 - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
58. arvcfb ENSDARG00000061688 2388 1.52 - - - - - 0.706 0.814 - - ARVCF, delta catenin family member b [Source:ZFIN;Acc:ZDB-GENE-060526-60]
59. fam133b ENSDARG00000013863 5070 1.519 - - - - 0.728 0.791 - - - family with sequence similarity 133, member B [Source:ZFIN;Acc:ZDB-GENE-060503-229]
60. si:ch211-106k21.5 ENSDARG00000086052 684 1.518 - 0.715 - - 0.803 - - - - si:ch211-106k21.5 [Source:ZFIN;Acc:ZDB-GENE-070912-7]
61. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.516 - - - - - 0.713 0.803 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
62. TUBGCP6 1991 1.516 - - - 0.741 0.775 - - - - tubulin, gamma complex associated protein 6
63. rps25 ENSDARG00000041811 52182 1.516 - - - - - 0.775 0.741 - - ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
64. CR354540.2 ENSDARG00000117517 18452 1.514 0.717 - - - - - 0.797 - -
65. ddx18 ENSDARG00000030789 3631 1.514 - 0.794 - - - 0.720 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Source:ZFIN;Acc:ZDB-GENE-030131-9685]
66. zfyve27 ENSDARG00000059835 604 1.511 - 0.706 - 0.805 - - - - - zinc finger, FYVE domain containing 27 [Source:ZFIN;Acc:ZDB-GENE-061013-502]
67. cttnbp2 ENSDARG00000040991 1697 1.509 - - - - - 0.726 0.783 - - cortactin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8134]
68. ndufs6 ENSDARG00000056583 7220 1.507 - - - - - 0.718 0.789 - - NADH:ubiquinone oxidoreductase subunit S6 [Source:ZFIN;Acc:ZDB-GENE-040912-86]
69. acss2 ENSDARG00000037781, ENSDARG00000112371 3100 1.503 - - - 0.778 - 0.725 - - - acyl-CoA synthetase short chain family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-388]
70. tp53rk ENSDARG00000112667 806 1.497 - - - 0.701 0.796 - - - - TP53 regulating kinase [Source:ZFIN;Acc:ZDB-GENE-050522-123]
71. pno1 ENSDARG00000008502 4547 1.496 - - - - - 0.702 0.794 - - partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
72. TNPO2 ENSDARG00000042887 2290 1.495 - 0.764 - - 0.731 - - - - transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
73. yme1l1a ENSDARG00000075192 2634 1.492 - - - - 0.774 - 0.718 - - YME1-like 1a [Source:ZFIN;Acc:ZDB-GENE-091113-41]
74. ncl1 2835 1.492 - - - - - 0.724 0.768 - - nicalin, transcript variant X3
75. eif4e2 ENSDARG00000038585 2116 1.492 - 0.716 - - - - 0.776 - - eukaryotic translation initiation factor 4E family member 2 [Source:ZFIN;Acc:ZDB-GENE-050327-59]
76. mrpl35 ENSDARG00000070589 1773 1.487 0.754 - - - - 0.733 - - - mitochondrial ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-060929-1082]
77. rab1ba ENSDARG00000058044 5080 1.486 - 0.767 - - 0.719 - - - - zRAB1B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-873]
78. atp5j 4272 1.484 - - - - - 0.731 0.753 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
79. lsm6 ENSDARG00000036995 4377 1.481 - 0.721 - - - - 0.760 - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040625-50]
80. ENSDARG00000074705 ENSDARG00000074705 507 1.481 - 0.732 - 0.749 - - - - -
81. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.469 - 0.748 - - 0.721 - - - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
82. coq3 ENSDARG00000069857, ENSDARG00000110000 708 1.465 - 0.750 - - - 0.715 - - - coenzyme Q3 methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040718-364]
83. mrpl54 ENSDARG00000071468 2715 1.463 - - - - 0.748 - 0.715 - - mitochondrial ribosomal protein L54 [Source:ZFIN;Acc:ZDB-GENE-050208-381]
84. pbdc1 ENSDARG00000057299, ENSDARG00000111256, ENSDARG00000112544 5960 1.46 - 0.735 - - - 0.725 - - - polysaccharide biosynthesis domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-459]
85. esd ENSDARG00000019496 3192 1.457 - - - - - 0.703 0.754 - - esterase D/formylglutathione hydrolase [Source:ZFIN;Acc:ZDB-GENE-050417-328]
86. svila ENSDARG00000055075, ENSDARG00000110002, ENSDARG00000114888 4078 1.457 0.714 - - - - - 0.743 - - supervillin a [Source:ZFIN;Acc:ZDB-GENE-990706-5]
87. obsl1a ENSDARG00000003684 1288 1.456 - - - - - 0.701 0.755 - - obscurin-like 1a [Source:ZFIN;Acc:ZDB-GENE-060503-649]
88. nnt ENSDARG00000023536 7357 1.456 - 0.701 - - - 0.755 - - - nicotinamide nucleotide transhydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2592]
89. aimp1 ENSDARG00000060036 5343 1.451 - - - - - 0.701 0.750 - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
90. smarcd3a ENSDARG00000038786 2894 1.448 - - - - - 0.728 0.720 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3a [Source:ZFIN;Acc:ZDB-GENE-070912-491]
91. plxnb1a ENSDARG00000075821 1702 1.448 - 0.725 - - - - 0.723 - - plexin b1a [Source:ZFIN;Acc:ZDB-GENE-050302-63]
92. fgf13a ENSDARG00000035056 752 1.445 - - - - - 0.702 0.743 - - fibroblast growth factor 13a [Source:ZFIN;Acc:ZDB-GENE-041114-101]
93. ARID3A ENSDARG00000070843 1613 1.444 - 0.711 - 0.733 - - - - - AT rich interactive domain 3A (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-140106-97]
94. hist2h2l ENSDARG00000068996, ENSDARG00000112150 10411 1.441 - 0.727 - - - - 0.714 - - histone 2, H2, like [Source:ZFIN;Acc:ZDB-GENE-031118-36]
95. zgc:110655 zgc:110655 4237 1.438 - 0.720 - - 0.718 - - - -
96. chchd7 ENSDARG00000068156 317 1.435 - - - - - 0.720 0.715 - - coiled-coil-helix-coiled-coil-helix domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-080204-55]
97. lepre1 lepre1 5346 1.432 0.717 - - - - 0.715 - - -
98. cnbpa ENSDARG00000045776 8648 1.43 0.709 - - - - 0.721 - - - CCHC-type zinc finger, nucleic acid binding protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5045]
99. vdac1 ENSDARG00000045132 8051 1.426 - 0.725 - - - - 0.701 - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
100. tmco1 ENSDARG00000069099, ENSDARG00000113013 4698 1.414 - 0.705 - - 0.709 - - - - transmembrane and coiled-coil domains 1 [Source:ZFIN;Acc:ZDB-GENE-050417-344]

There are 1528 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA