Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pabpn1

Gene Name Gene ID Reads Annotation
pabpn1 ENSDARG00000045373 4876 poly(A) binding protein, nuclear 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2401]










Genes with expression patterns similar to pabpn1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pabpn1 ENSDARG00000045373 4876 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 poly(A) binding protein, nuclear 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2401]
2. eif3ja ENSDARG00000012603 6324 3.096 - 0.726 0.902 - 0.705 - 0.763 - - eukaryotic translation initiation factor 3, subunit Ja [Source:ZFIN;Acc:ZDB-GENE-040426-1266]
3. paxip1 ENSDARG00000005606 1417 2.811 - - 0.898 - - - - 0.963 0.950 PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
4. psmb2 ENSDARG00000031511 4016 2.634 - 0.929 - - - - 0.766 0.939 - proteasome subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-353]
5. arid1b ENSDARG00000092503 1376 2.57 - - 0.891 - - - 0.777 - 0.902 AT rich interactive domain 1B (SWI1-like) [Source:ZFIN;Acc:ZDB-GENE-030131-4459]
6. samm50l ENSDARG00000039681 2465 2.546 - - 0.869 - - 0.735 - - 0.942 sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
7. tmem248 ENSDARG00000018825 1560 2.545 - - 0.875 - - - 0.798 - 0.872 transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
8. sumo3b ENSDARG00000035993 3414 2.511 - 0.765 - - - - 0.840 - 0.906 small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
9. tjp1a ENSDARG00000077506 2658 2.501 0.762 - 0.875 - - - 0.864 - - tight junction protein 1a [Source:ZFIN;Acc:ZDB-GENE-031001-2]
10. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 2.482 - - - - 0.729 - 0.827 - 0.926 ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
11. mcts1 ENSDARG00000025972 4662 2.479 - - 0.867 - - - 0.738 - 0.874 malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
12. psmb7 ENSDARG00000037962 11542 2.471 - 0.817 0.863 - - - 0.791 - - proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
13. syncripl ENSDARG00000026723 3889 2.425 - - - - 0.711 - 0.833 - 0.881 synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
14. ZBTB16 ZBTB16 3385 2.392 - 0.772 0.873 - - - - - 0.747
15. gstm gstm 4064 2.391 - - 0.853 - - 0.773 0.765 - -
16. ywhae2 ENSDARG00000017014 5105 2.308 - - 0.841 - - 0.721 0.746 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050306-44]
17. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 2.304 0.757 0.788 - - - - 0.759 - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
18. plcg1 ENSDARG00000038442 5324 2.304 - 0.774 - - - - 0.819 - 0.711 phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
19. rab5if ENSDARG00000074790 8807 2.303 - 0.710 0.804 - - - - 0.789 - RAB5 interacting factor [Source:ZFIN;Acc:ZDB-GENE-030131-5938]
20. glrx3 ENSDARG00000098785 4138 2.229 0.725 0.790 - - - - 0.714 - - glutaredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-22]
21. hspa5 ENSDARG00000103846 4661 2.201 - 0.720 - - - - 0.741 - 0.740 heat shock protein 5 [Source:ZFIN;Acc:ZDB-GENE-031001-11]
22. araf ENSDARG00000054533 1132 1.885 - - - - - - - 0.956 0.929 A-Raf proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050102-2]
23. MAN2A2 ENSDARG00000063101 922 1.882 - - - - - - - 0.925 0.957 mannosidase, alpha, class 2A, member 2 [Source:ZFIN;Acc:ZDB-GENE-110331-1]
24. st8sia2 ENSDARG00000018788 2183 1.865 - - - - - - - 0.919 0.946 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
25. ell ENSDARG00000000568 1404 1.847 - - - - - - - 0.934 0.913 elongation factor RNA polymerase II [Source:ZFIN;Acc:ZDB-GENE-030131-3946]
26. pcnp ENSDARG00000037713 2754 1.84 - - 0.903 - - - - 0.937 - PEST proteolytic signal containing nuclear protein [Source:ZFIN;Acc:ZDB-GENE-041010-130]
27. znf292a ENSDARG00000016763 2253 1.838 - - 0.903 - - - - 0.935 - zinc finger protein 292a [Source:ZFIN;Acc:ZDB-GENE-071004-18]
28. phc2b_1 ENSDARG00000013224 1316 1.833 - - 0.878 - - - - - 0.955 polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
29. nploc4 ENSDARG00000100487 1262 1.826 - - 0.891 - - - - - 0.935 NPL4 homolog, ubiquitin recognition factor [Source:ZFIN;Acc:ZDB-GENE-030131-5658]
30. pes ENSDARG00000018902 3286 1.824 - - - - - - - 0.912 0.912 pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
31. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 1.824 - - 0.879 - - - - - 0.945 APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
32. yy1b ENSDARG00000027978 2669 1.821 - - 0.865 - - - - 0.956 - YY1 transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2127]
33. pdzrn3b ENSDARG00000073869 1566 1.815 - - 0.876 - - - - - 0.939 PDZ domain containing RING finger 3b [Source:ZFIN;Acc:ZDB-GENE-071022-4]
34. tom1 ENSDARG00000104581 1457 1.806 - - - - - - - 0.968 0.838 target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
35. gdi1 ENSDARG00000056122 4106 1.799 - - 0.873 - - - - - 0.926 GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
36. olig2 ENSDARG00000040946 1405 1.794 - - 0.858 - - - - - 0.936 oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
37. snx27a ENSDARG00000033804 2249 1.771 - - - - - - 0.851 0.920 - sorting nexin family member 27a [Source:ZFIN;Acc:ZDB-GENE-060503-371]
38. slc1a5 ENSDARG00000099186 7580 1.77 - - 0.856 - - - - 0.914 - solute carrier family 1 (neutral amino acid transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-070501-4]
39. ubl3b ENSDARG00000021556 1210 1.766 - - - - - - 0.831 - 0.935 ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
40. qser1 ENSDARG00000074750 597 1.765 - - - - - - 0.807 - 0.958 glutamine and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2978]
41. kifc1 ENSDARG00000001558 6658 1.759 - - 0.804 - - - - - 0.955 kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
42. gspt1l ENSDARG00000098627 8381 1.753 - 0.868 0.885 - - - - - - G1 to S phase transition 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-4009]
43. eif4e3 ENSDARG00000005078 1624 1.753 - - 0.863 - - - - - 0.890 eukaryotic translation initiation factor 4E family member 3 [Source:ZFIN;Acc:ZDB-GENE-040912-156]
44. gatad2ab ENSDARG00000006192 2461 1.748 - - - - - - - 0.935 0.813 GATA zinc finger domain containing 2Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2372]
45. wu:fb17g07 wu:fb17g07 10567 1.733 - - 0.927 - - - 0.806 - -
46. cpsf3 ENSDARG00000027649 6897 1.731 - - 0.891 - - - - 0.840 - cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
47. RIN3 ENSDARG00000077618 745 1.724 - - - - - - 0.763 0.961 - Ras and Rab interactor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8871]
48. cxxc1l cxxc1l 1035 1.723 - - - - - - 0.760 0.963 -
49. ranbp9 ENSDARG00000061048 2687 1.722 - - 0.868 - - - - - 0.854 RAN binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-021030-5]
50. rrbp1a ENSDARG00000013763 4723 1.722 - - 0.908 - - - - 0.814 - ribosome binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9795]
51. BDP1 BDP1 2514 1.721 - 0.807 - - - - - 0.914 -
52. kmt2d ENSDARG00000037060 1232 1.716 - - - - - - 0.753 0.963 - lysine (K)-specific methyltransferase 2D [Source:ZFIN;Acc:ZDB-GENE-060223-2]
53. drg2 ENSDARG00000006642 1167 1.711 - - - - - - 0.769 0.942 - developmentally regulated GTP binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040808-29]
54. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.709 - - 0.841 - - - - - 0.868 keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
55. rpf2 ENSDARG00000043960 2719 1.709 - - 0.862 - - - 0.847 - - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
56. atp6v1h ENSDARG00000006370 7028 1.709 - - 0.800 - - - - 0.909 - ATPase H+ transporting V1 subunit H [Source:ZFIN;Acc:ZDB-GENE-021219-2]
57. flot2a ENSDARG00000004830 5276 1.708 - - 0.870 - - - - 0.838 - flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
58. supt5h ENSDARG00000042724, ENSDARG00000111598 6419 1.707 - - - - - - - 0.864 0.843 SPT5 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-001207-1]
59. cd99l2 ENSDARG00000056722 5036 1.703 - - 0.912 - - - - - 0.791 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
60. NUMA1_2 NUMA1_2 2897 1.701 - - - - - - 0.734 - 0.967
61. mier1a ENSDARG00000041072 1690 1.697 - - - - - - 0.764 - 0.933 mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
62. CCDC88C ENSDARG00000053713 1026 1.695 - - - - - - 0.731 - 0.964 coiled-coil domain containing 88C [Source:ZFIN;Acc:ZDB-GENE-100419-3]
63. AL929322.1 AL929322.1 300 1.694 - - - - - - 0.743 - 0.951
64. gpx4b ENSDARG00000076836 8085 1.68 - - - - 0.731 - - 0.949 - glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
65. aldh7a1 ENSDARG00000018426 4637 1.679 - 0.746 - - - - - 0.933 - aldehyde dehydrogenase 7 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-6129]
66. prkcsh ENSDARG00000004470 1424 1.679 - - - - - - 0.732 0.947 - protein kinase C substrate 80K-H [Source:ZFIN;Acc:ZDB-GENE-040426-770]
67. qars ENSDARG00000010316 2715 1.677 - - - - - - 0.736 0.941 - glutaminyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1011]
68. wu:fj29h11 ENSDARG00000096562 863 1.676 - - - - - - 0.724 - 0.952 wu:fj29h11 [Source:ZFIN;Acc:ZDB-GENE-030131-7558]
69. zgc:56095 ENSDARG00000018461 3360 1.673 - 0.785 - - - - - 0.888 - zgc:56095 [Source:ZFIN;Acc:ZDB-GENE-040426-1948]
70. soga1 ENSDARG00000063075 1066 1.671 - - - - - - 0.739 - 0.932 suppressor of glucose, autophagy associated 1 [Source:ZFIN;Acc:ZDB-GENE-090313-188]
71. smg5 ENSDARG00000041481 1286 1.67 - - 0.889 - - - 0.781 - - SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]
72. cenpl ENSDARG00000038802 696 1.667 - - - - - - 0.710 0.957 - centromere protein L [Source:ZFIN;Acc:ZDB-GENE-040930-6]
73. dcaf13 ENSDARG00000002267 2435 1.666 - - - - - - 0.745 - 0.921 ddb1 and cul4 associated factor 13 [Source:ZFIN;Acc:ZDB-GENE-040426-703]
74. tex10 ENSDARG00000055885 1229 1.666 - - - - - - 0.718 - 0.948 testis expressed 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2827]
75. hic1l ENSDARG00000045660 1489 1.665 - - - - - - 0.710 - 0.955 hypermethylated in cancer 1 like [Source:ZFIN;Acc:ZDB-GENE-030620-1]
76. FBXL3 FBXL3 1769 1.662 - - - - - - 0.733 - 0.929
77. tsn ENSDARG00000041830, ENSDARG00000111147 1268 1.659 - - - - - - 0.700 0.959 - translin [Source:ZFIN;Acc:ZDB-GENE-030131-6039]
78. si:dkeyp-113d7.1 ENSDARG00000059109 2145 1.658 - - - - - - 0.723 0.935 - si:dkeyp-113d7.1 [Source:ZFIN;Acc:ZDB-GENE-030131-755]
79. kank2 ENSDARG00000018393 1804 1.657 - - - - - - 0.754 - 0.903 KN motif and ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-040724-121]
80. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.651 - - - - - - 0.745 0.906 - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
81. si:dkeyp-44a8.2 ENSDARG00000092493 8308 1.65 - - - - 0.783 - 0.867 - - si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
82. stox2a ENSDARG00000070162 1620 1.649 - - - - - - 0.705 0.944 - storkhead box 2a [Source:ZFIN;Acc:ZDB-GENE-090313-101]
83. smarcb1a ENSDARG00000033647, ENSDARG00000111561 3528 1.648 - - 0.902 - - - - - 0.746 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1a [Source:ZFIN;Acc:ZDB-GENE-041114-5]
84. cnot3a ENSDARG00000007135 3084 1.648 - - 0.762 - - - - - 0.886 CCR4-NOT transcription complex, subunit 3a [Source:ZFIN;Acc:ZDB-GENE-040927-6]
85. xrcc5_1 ENSDARG00000099298 1533 1.648 - - 0.899 - - - 0.749 - - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
86. pdcd11 ENSDARG00000052480 2791 1.647 - - - - - - 0.722 - 0.925 programmed cell death 11 [Source:ZFIN;Acc:ZDB-GENE-030131-4076]
87. myo1b ENSDARG00000024694 1761 1.643 - - - - - - 0.764 - 0.879 myosin IB [Source:ZFIN;Acc:ZDB-GENE-030131-695]
88. melk ENSDARG00000030759 1150 1.637 - - - - 0.718 - - - 0.919 maternal embryonic leucine zipper kinase [Source:ZFIN;Acc:ZDB-GENE-990603-5]
89. abl1 ENSDARG00000035187 3553 1.637 - - - - - - - 0.882 0.755 c-abl oncogene 1, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-100812-9]
90. pebp1 ENSDARG00000042069 6651 1.628 - - - - - - - 0.914 0.714 phosphatidylethanolamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2621]
91. pbrm1l ENSDARG00000077038, ENSDARG00000116839 1978 1.628 - - 0.882 - - - 0.746 - - polybromo 1, like [Source:ZFIN;Acc:ZDB-GENE-010501-3]
92. rabac1 ENSDARG00000004171 2708 1.622 - - - - - 0.717 - 0.905 - Rab acceptor 1 (prenylated) [Source:ZFIN;Acc:ZDB-GENE-040625-146]
93. brd3b ENSDARG00000100129 6387 1.621 - 0.874 - - - - 0.747 - - bromodomain containing 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5316]
94. mrpl3 ENSDARG00000103318 2308 1.62 - 0.724 - - - - - - 0.896 mitochondrial ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-8227]
95. dek ENSDARG00000070108 2262 1.617 - - 0.915 - 0.702 - - - - DEK proto-oncogene [Source:ZFIN;Acc:ZDB-GENE-060512-191]
96. CABZ01076275.1 ENSDARG00000100753 5137 1.617 - - 0.875 - - - 0.742 - - scavenger receptor class B, member 2b [Source:NCBI gene;Acc:564077]
97. GPR17 ENSDARG00000062030 713 1.617 - - - - - - 0.719 - 0.898 G protein-coupled receptor 17 [Source:ZFIN;Acc:ZDB-GENE-100922-133]
98. slc43a1a ENSDARG00000037393, ENSDARG00000113118 5797 1.613 - - - - - 0.763 - 0.850 - solute carrier family 43 (amino acid system L transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6327]
99. pbxip1b ENSDARG00000011824 3726 1.613 - - 0.761 - - - - - 0.852 pre-B-cell leukemia homeobox interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2032]
100. npm1b ENSDARG00000037675 5448 1.61 - - 0.904 - - - 0.706 - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]

There are 1705 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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