Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for p4ha2

Gene Name Gene ID Reads Annotation
p4ha2 ENSDARG00000010085 2008 procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-030827-1]










Genes with expression patterns similar to p4ha2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. p4ha2 ENSDARG00000010085 2008 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-030827-1]
2. col14a1a ENSDARG00000005762 4778 2.362 - 0.718 0.848 0.796 - - - - - collagen, type XIV, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9889]
3. wdr66 ENSDARG00000059855 276 1.855 - - 0.928 - - - - - 0.927 WD repeat domain 66 [Source:ZFIN;Acc:ZDB-GENE-060526-328]
4. selm 2395 1.775 - - - - - 0.800 - - 0.975 selenoprotein M
5. zgc:112484 zgc:112484 780 1.757 - - - - - - - 0.827 0.930
6. lama5 ENSDARG00000058543 2782 1.739 - - 0.959 - - - - 0.780 - laminin, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9823]
7. dpp3 ENSDARG00000020676 2393 1.715 - - 0.803 - - - - - 0.912 dipeptidyl-peptidase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1247]
8. rhot1a ENSDARG00000099996 2059 1.67 - 0.725 - - - - - - 0.945 ras homolog family member T1a [Source:ZFIN;Acc:ZDB-GENE-030131-5354]
9. sra1 ENSDARG00000053619 2799 1.667 - - 0.743 - - - - - 0.924 steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
10. gpc1b ENSDARG00000090585 1393 1.664 - - - - - - 0.741 - 0.923 glypican 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1306]
11. CABZ01034848.1 CABZ01034848.1 9936 1.653 - - 0.898 - - - - - 0.755
12. map3k7 ENSDARG00000020469 2845 1.635 - - 0.901 - - - 0.734 - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
13. mxra5b ENSDARG00000076309 190 1.629 - - 0.921 - - - - 0.708 - matrix-remodelling associated 5b [Source:ZFIN;Acc:ZDB-GENE-081104-119]
14. slit1a ENSDARG00000044954 3810 1.602 0.707 - - - - - - - 0.895 slit homolog 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030722-3]
15. zfand5b ENSDARG00000002271 4145 1.596 - - - - - - 0.759 - 0.837 zinc finger, AN1-type domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-875]
16. xrn1 ENSDARG00000091652 2864 1.58 - - 0.785 - - - - 0.795 - 5'-3' exoribonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1203]
17. psat1 ENSDARG00000016733 8084 1.564 - - 0.776 - - - 0.788 - - phosphoserine aminotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5723]
18. nufip2 ENSDARG00000069066 3965 1.559 - - 0.806 - - - - - 0.753 nuclear fragile X mental retardation protein interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-041111-7]
19. tmed3 ENSDARG00000028816, ENSDARG00000113132 1686 1.559 - - 0.856 - - - - 0.703 - transmembrane p24 trafficking protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8335]
20. pof1b ENSDARG00000054060 2355 1.556 - 0.701 - - - - - - 0.855 POF1B, actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-4287]
21. aes ENSDARG00000021805, ENSDARG00000115836 1533 1.528 - - - - - 0.721 - - 0.807 amino-terminal enhancer of split [Source:ZFIN;Acc:ZDB-GENE-040426-1409]
22. fermt2 ENSDARG00000020242 9351 1.519 - - 0.739 - - - - - 0.780 fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
23. stc2a ENSDARG00000056680, ENSDARG00000109468 1156 1.496 - - - - - 0.707 - 0.789 - stanniocalcin 2a [Source:ZFIN;Acc:ZDB-GENE-041008-14]
24. fdps ENSDARG00000040890 4000 1.49 - 0.728 0.762 - - - - - - farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) [Source:ZFIN;Acc:ZDB-GENE-050506-78]
25. fgfr1a ENSDARG00000011027 2705 1.467 - - 0.766 - - - 0.701 - - fibroblast growth factor receptor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-255]
26. st13 ENSDARG00000021973 7787 1.464 - - - - - - 0.713 - 0.751 ST13, Hsp70 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5395]
27. cyt1 ENSDARG00000092947 1717 0.967 - - - - - - - - 0.967 type I cytokeratin, enveloping layer [Source:ZFIN;Acc:ZDB-GENE-991008-6]
28. rftn2 ENSDARG00000056078 1449 0.962 - - - - - - - - 0.962 raftlin family member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2760]
29. crabp1b ENSDARG00000035904 2753 0.961 - - 0.961 - - - - - - cellular retinoic acid binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040624-3]
30. crabp2a_1 ENSDARG00000073978 888 0.956 - - - - - - - - 0.956 cellular retinoic acid binding protein 2, a [Source:ZFIN;Acc:ZDB-GENE-020320-4]
31. FAM114A2 ENSDARG00000079508 1226 0.955 - - - - - - - - 0.955 family with sequence similarity 114, member A2 [Source:ZFIN;Acc:ZDB-GENE-030131-6308]
32. myl12.2 ENSDARG00000025326 1887 0.953 - - - - - - - - 0.953 myosin, light chain 12, genome duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9028]
33. maf1 ENSDARG00000013122 3365 0.952 - - - - - - - - 0.952 MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
34. tll1 ENSDARG00000037429, ENSDARG00000113847 1039 0.952 - - - - - - - - 0.952 tolloid-like 1 [Source:ZFIN;Acc:ZDB-GENE-041020-1]
35. lnx1 ENSDARG00000043323, ENSDARG00000113875 1199 0.952 - - - - - - - - 0.952 ligand of numb-protein X 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9439]
36. si:dkey-57c15.9 si:dkey-57c15.9 665 0.951 - - - - - - - - 0.951
37. mmp14a ENSDARG00000002235 911 0.95 - - 0.950 - - - - - - matrix metallopeptidase 14a (membrane-inserted) [Source:ZFIN;Acc:ZDB-GENE-030901-1]
38. lysmd3 ENSDARG00000024693 754 0.95 - - 0.950 - - - - - - LysM, putative peptidoglycan-binding, domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040625-88]
39. antxr1c ENSDARG00000063612 3203 0.947 - - 0.947 - - - - - - ANTXR cell adhesion molecule 1c [Source:ZFIN;Acc:ZDB-GENE-090514-5]
40. dkk1b ENSDARG00000045219, ENSDARG00000112504 1047 0.946 - - - - - - - - 0.946 dickkopf WNT signaling pathway inhibitor 1b [Source:ZFIN;Acc:ZDB-GENE-990708-5]
41. si:dkey-193b15.6 si:dkey-193b15.6 1340 0.946 - - - - - - - - 0.946
42. fzd2 ENSDARG00000054438 585 0.946 - - 0.946 - - - - - - frizzled class receptor 2 [Source:ZFIN;Acc:ZDB-GENE-990415-224]
43. wwtr1 ENSDARG00000067719 3484 0.946 - - - - - - - - 0.946 WW domain containing transcription regulator 1 [Source:ZFIN;Acc:ZDB-GENE-051101-1]
44. hoxa5a ENSDARG00000102501 1667 0.945 - - 0.945 - - - - - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
45. cpla2 cpla2 1031 0.945 - - - - - - - - 0.945
46. nudt9 ENSDARG00000087927 1148 0.944 - - - - - - - - 0.944 nudix (nucleoside diphosphate linked moiety X)-type motif 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2669]
47. itpkcb ENSDARG00000067741 2370 0.942 - - - - - - - - 0.942 inositol-trisphosphate 3-kinase Cb [Source:ZFIN;Acc:ZDB-GENE-080225-27]
48. ppm1e ENSDARG00000026499 770 0.942 - - - - - - - - 0.942 protein phosphatase, Mg2+/Mn2+ dependent, 1E [Source:ZFIN;Acc:ZDB-GENE-070326-2]
49. ptpn13 ENSDARG00000103699 2866 0.941 - - - - - - - - 0.941 protein tyrosine phosphatase, non-receptor type 13 [Source:ZFIN;Acc:ZDB-GENE-070410-72]
50. exoc3 ENSDARG00000014582, ENSDARG00000114378, ENSDARG00000117037 1155 0.941 - - - - - - - - 0.941 exocyst complex component 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5947]
51. fastk ENSDARG00000077075 1619 0.941 - - - - - - - - 0.941 Fas-activated serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-070912-680]
52. C3H16orf58 C3H16orf58 487 0.939 - - 0.939 - - - - - -
53. zgc:110130 ENSDARG00000039203 352 0.939 - - - - - - - - 0.939 zgc:110130 [Source:ZFIN;Acc:ZDB-GENE-050522-208]
54. GPR108 ENSDARG00000096651 1734 0.939 - - - - - - - - 0.939 G protein-coupled receptor 108 [Source:ZFIN;Acc:ZDB-GENE-121214-129]
55. edc4 ENSDARG00000062266, ENSDARG00000114070 2505 0.939 - - - - - - - - 0.939 enhancer of mRNA decapping 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5032]
56. map4k3a ENSDARG00000087742 771 0.938 - - - - - - - - 0.938 mitogen-activated protein kinase kinase kinase kinase 3a [Source:ZFIN;Acc:ZDB-GENE-130329-1]
57. uhmk1 ENSDARG00000059575 1486 0.938 - - - - - - - - 0.938 U2AF homology motif (UHM) kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1014]
58. matn3b ENSDARG00000069265 856 0.938 - - - - - - - - 0.938 matrilin 3b [Source:ZFIN;Acc:ZDB-GENE-050221-9]
59. ptprfa ENSDARG00000103479 1250 0.938 - - - - - - - - 0.938 protein tyrosine phosphatase, receptor type, f, a [Source:ZFIN;Acc:ZDB-GENE-020107-2]
60. ptpn23a ENSDARG00000070124 1206 0.938 - - - - - - - - 0.938 protein tyrosine phosphatase, non-receptor type 23, a [Source:ZFIN;Acc:ZDB-GENE-100921-24]
61. snf8 ENSDARG00000058076 384 0.938 - - 0.938 - - - - - - SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-117]
62. frem3 ENSDARG00000074677, ENSDARG00000111196, ENSDARG00000114207 2326 0.937 - - 0.937 - - - - - - Fras1 related extracellular matrix 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9788]
63. cables1 ENSDARG00000099395 361 0.937 - - 0.937 - - - - - - Cdk5 and Abl enzyme substrate 1 [Source:ZFIN;Acc:ZDB-GENE-070912-509]
64. wdr73 ENSDARG00000023152, ENSDARG00000111497 217 0.936 - - 0.936 - - - - - - WD repeat domain 73 [Source:ZFIN;Acc:ZDB-GENE-050417-126]
65. IGSF3 ENSDARG00000077002, ENSDARG00000115203 564 0.936 - - 0.936 - - - - - - immunoglobulin superfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-243]
66. zgc:153952 739 0.936 - - 0.936 - - - - - - zgc:153952, transcript variant X1
67. ARAP2 ARAP2 428 0.936 - - - - - - - - 0.936
68. klhdc4 ENSDARG00000100206, ENSDARG00000113735 2362 0.935 - - - - - - - - 0.935 kelch domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-2057]
69. adprhl2 ENSDARG00000019338, ENSDARG00000110712 652 0.935 - - - - - - - - 0.935 ADP-ribosylhydrolase like 2 [Source:ZFIN;Acc:ZDB-GENE-040912-85]
70. gli2b ENSDARG00000020884 1468 0.935 - - - - - - - - 0.935 GLI family zinc finger 2b [Source:ZFIN;Acc:ZDB-GENE-050523-1]
71. igf1rb ENSDARG00000034434, ENSDARG00000110935 813 0.935 - - 0.935 - - - - - - insulin-like growth factor 1b receptor [Source:ZFIN;Acc:ZDB-GENE-020503-2]
72. znf296 ENSDARG00000077897 658 0.935 - - - - - - - - 0.935 zinc finger protein 296 [Source:ZFIN;Acc:ZDB-GENE-050419-201]
73. cyfip1 ENSDARG00000044345 5483 0.935 - - - - - - - - 0.935 cytoplasmic FMR1 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8557]
74. slit3 ENSDARG00000034268, ENSDARG00000111488, ENSDARG00000115194 3999 0.934 - - - - - - - - 0.934 slit homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-4]
75. lepre1 lepre1 5346 0.934 - - - - - - - - 0.934
76. C18H11orf58 C18H11orf58 1293 0.934 - - 0.934 - - - - - -
77. hn1l hn1l 8861 0.934 - - - - - - - - 0.934
78. arhgap27 ENSDARG00000104255 439 0.934 - - 0.934 - - - - - - Rho GTPase activating protein 27 [Source:ZFIN;Acc:ZDB-GENE-030131-3922]
79. pak2a ENSDARG00000068177 8931 0.933 - - 0.933 - - - - - - p21 protein (Cdc42/Rac)-activated kinase 2a [Source:ZFIN;Acc:ZDB-GENE-021011-2]
80. cdkal1 ENSDARG00000104848 2102 0.933 - - - - - - - - 0.933 CDK5 regulatory subunit associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1443]
81. SURF2 ENSDARG00000112476 592 0.933 - - - - - - - - 0.933 surfeit 2 [Source:ZFIN;Acc:ZDB-GENE-040801-86]
82. slc2a15a ENSDARG00000029894 2674 0.933 - - - - - - - - 0.933 solute carrier family 2 (facilitated glucose transporter), member 15a [Source:ZFIN;Acc:ZDB-GENE-060531-109]
83. nt5c1bb ENSDARG00000033742 1248 0.933 - - - - - - - - 0.933 5'-nucleotidase, cytosolic IB b [Source:ZFIN;Acc:ZDB-GENE-030131-7205]
84. F8A3 F8A3 646 0.932 - - 0.932 - - - - - -
85. atf6 ENSDARG00000012656 3873 0.932 - - - - - - - - 0.932 activating transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-041014-328]
86. tmub1 ENSDARG00000038787 1012 0.932 - - 0.932 - - - - - - transmembrane and ubiquitin-like domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2504]
87. eprs ENSDARG00000060494 4729 0.932 - - - - - - - - 0.932 glutamyl-prolyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-638]
88. pcdh8 ENSDARG00000006467 317 0.932 - - 0.932 - - - - - - protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
89. rabif ENSDARG00000002690, ENSDARG00000114340 891 0.931 - - - - - - - - 0.931 RAB interacting factor [Source:ZFIN;Acc:ZDB-GENE-040718-216]
90. alg6 ENSDARG00000017617 483 0.931 - - 0.931 - - - - - - asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-040808-45]
91. cpm ENSDARG00000011769, ENSDARG00000113736 1113 0.931 - - 0.931 - - - - - - carboxypeptidase M [Source:ZFIN;Acc:ZDB-GENE-041210-191]
92. commd4 ENSDARG00000061946 3281 0.931 - - - - - - - - 0.931 COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
93. TRMT10A ENSDARG00000036678 621 0.931 - - - - - - - - 0.931 tRNA methyltransferase 10A [Source:ZFIN;Acc:ZDB-GENE-130530-594]
94. KIF20B KIF20B 800 0.93 - - - - - - - - 0.930
95. anxa11b ENSDARG00000002632 5132 0.93 - - - - - - - - 0.930 annexin A11b [Source:ZFIN;Acc:ZDB-GENE-030707-5]
96. mfsd2ab ENSDARG00000035909, ENSDARG00000114714 1520 0.93 - - 0.930 - - - - - - major facilitator superfamily domain containing 2ab [Source:NCBI gene;Acc:445176]
97. wnt5b ENSDARG00000102464 1662 0.93 - - 0.930 - - - - - - wingless-type MMTV integration site family, member 5b [Source:ZFIN;Acc:ZDB-GENE-980526-87]
98. pvrl3l pvrl3l 943 0.93 - - - - - - - - 0.930
99. c1qtnf5 ENSDARG00000056134 729 0.93 - - - - - - - - 0.930 C1q and TNF related 5 [Source:ZFIN;Acc:ZDB-GENE-050706-101]
100. rnd3b ENSDARG00000007396 881 0.93 - - 0.930 - - - - - - Rho family GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-040718-331]

There are 866 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA