Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for otx1a

Gene Name Gene ID Reads Annotation
otx1a 1607 orthodenticle homeobox 1a










Genes with expression patterns similar to otx1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. otx1a 1607 7 1.000 - 1.000 1.000 1.000 1.000 - 1.000 1.000 orthodenticle homeobox 1a
2. DMBX1 DMBX1 140 3.37 - - 0.897 - 0.792 - - 0.742 0.939
3. tnnt2a ENSDARG00000020610 313 2.367 0.799 - 0.796 - 0.772 - - - - troponin T type 2a (cardiac) [Source:ZFIN;Acc:ZDB-GENE-000626-1]
4. tcf7l2 ENSDARG00000004415, ENSDARG00000110486 1920 2.336 - - 0.893 - - - - 0.725 0.718 transcription factor 7 like 2 [Source:ZFIN;Acc:ZDB-GENE-991110-8]
5. si:dkeyp-73d8.8 ENSDARG00000094045 17 2 1.000 - - - - 1.000 - - - si:dkeyp-73d8.8 [Source:ZFIN;Acc:ZDB-GENE-070912-684]
6. CABZ01081748.1 ENSDARG00000102139 31 1.953 - - - - - 1.000 - 0.953 - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
7. nr2e1 ENSDARG00000017107 340 1.927 1.000 - - - - - - - 0.927 nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
8. gucy2f ENSDARG00000025504 6 1.796 - - - - - 1.000 - - 0.796 guanylate cyclase 2F, retinal [Source:ZFIN;Acc:ZDB-GENE-011128-7]
9. stk33 ENSDARG00000054318, ENSDARG00000114909 34 1.785 1.000 - - - - 0.785 - - - serine/threonine kinase 33 [Source:ZFIN;Acc:ZDB-GENE-040724-242]
10. syk ENSDARG00000008186 24 1.78 0.896 - - - - 0.884 - - - spleen tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-040702-3]
11. helt ENSDARG00000056400 482 1.78 - - 0.898 - - - - - 0.882 helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
12. zfyve26 ENSDARG00000040131 87 1.744 0.905 - - - - 0.839 - - - zinc finger, FYVE domain containing 26 [Source:ZFIN;Acc:ZDB-GENE-030131-3286]
13. OCEL1 OCEL1 27 1.73 - - - - - 1.000 - - 0.730
14. klc4_1 ENSDARG00000086985 22 1.722 1.000 - - - - 0.722 - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
15. cuedc1a ENSDARG00000068716 232 1.7 - - - - - - - 0.846 0.854 CUE domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061027-344]
16. tdrd9 ENSDARG00000013453 22 1.683 0.742 - - - - 0.941 - - - tudor domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-090313-193]
17. gc3 31 1.68 - - - - - 0.884 - - 0.796 guanylyl cyclase 3, transcript variant X2
18. dlx1a ENSDARG00000013125 142 1.674 0.858 - - - - - - 0.816 - distal-less homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-990415-48]
19. tnni1b ENSDARG00000052708 478 1.633 - - 0.823 - 0.810 - - - - troponin I type 1b (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-041212-37]
20. PLIN3 PLIN3 29 1.614 - - - - - 0.715 - - 0.899
21. tube1 ENSDARG00000043982, ENSDARG00000096620 96 1.611 - - - - - 0.875 - 0.736 - tubulin, epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1174]
22. MPPED1 ENSDARG00000088181 117 1.605 - - - - - - - 0.720 0.885 metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
23. tfap2d ENSDARG00000023272 308 1.598 - - - - 0.712 - - - 0.886 transcription factor AP-2 delta (activating enhancer binding protein 2 delta) [Source:ZFIN;Acc:ZDB-GENE-050913-99]
24. vmhc 234 1.596 - - 0.824 - 0.772 - - - - ventricular myosin heavy chain
25. neurod6a ENSDARG00000040008 17 1.581 - - - - - - - 0.881 0.700 neuronal differentiation 6a [Source:ZFIN;Acc:ZDB-GENE-010608-1]
26. dmbx1a ENSDARG00000009922 284 1.57 - - - - - - - 0.702 0.868 diencephalon/mesencephalon homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020117-1]
27. otx2 766 1.564 - - 0.854 - - - - 0.710 - orthodenticle homeobox 2, transcript variant X2
28. tbr1b ENSDARG00000004712 248 1.562 - - - - - - - 0.782 0.780 T-box, brain, 1b [Source:ZFIN;Acc:ZDB-GENE-000323-1]
29. myl7 ENSDARG00000019096 1023 1.56 - - 0.784 - 0.776 - - - - myosin, light chain 7, regulatory [Source:ZFIN;Acc:ZDB-GENE-991019-3]
30. fhl2a ENSDARG00000042018 244 1.516 - - 0.728 - 0.788 - - - - four and a half LIM domains 2a [Source:ZFIN;Acc:ZDB-GENE-040808-49]
31. hspb12 139 1.513 - - 0.784 - 0.729 - - - - heat shock protein, alpha-crystallin-related, b12
32. nfia ENSDARG00000062420 573 1.493 - - - - - - - 0.718 0.775 nuclear factor I/A [Source:ZFIN;Acc:ZDB-GENE-050208-501]
33. zgc:173702 ENSDARG00000110229 411 1.484 0.745 - - - - - - 0.739 - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
34. nppa ENSDARG00000052960 295 1.476 - - 0.729 - 0.747 - - - - natriuretic peptide A [Source:ZFIN;Acc:ZDB-GENE-030131-95]
35. apod apod 344 1.445 - - 0.739 - 0.706 - - - -
36. rab3db ENSDARG00000101534 45 1.436 0.732 - 0.704 - - - - - - RAB3D, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-428]
37. lhx9 ENSDARG00000056979 249 1.423 - - - - - - - 0.717 0.706 LIM homeobox 9 [Source:ZFIN;Acc:ZDB-GENE-050417-210]
38. irx1a ENSDARG00000101831 644 1.418 - - - - - - - 0.706 0.712 iroquois homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040707-1]
39. BX569778.1 BX569778.1 36 1 1.000 - - - - - - - -
40. si:dkey-105n5.3 si:dkey-105n5.3 9 1 1.000 - - - - - - - -
41. CABZ01049058.1 CABZ01049058.1 7 1 1.000 - - - - - - - -
42. rspo3 ENSDARG00000070081 4 1 - - - - - 1.000 - - - R-spondin 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9814]
43. FRMPD2 ENSDARG00000074119 5 1 1.000 - - - - - - - - FERM and PDZ domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110315-2]
44. ncor2 ENSDARG00000000966 3352 1 - - - 1.000 - - - - - nuclear receptor corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-030616-81]
45. ugt2b3 46 1 1.000 - - - - - - - - UDP glucuronosyltransferase 2 family, polypeptide B3
46. tox3 ENSDARG00000073957 3075 1 - - - 1.000 - - - - - TOX high mobility group box family member 3 [Source:ZFIN;Acc:ZDB-GENE-090312-209]
47. CR628395.1 ENSDARG00000116298 75 1 1.000 - - - - - - - -
48. si:dkey-65b12.6 ENSDARG00000076830 2489 1 - - - 1.000 - - - - - si:dkey-65b12.6 [Source:ZFIN;Acc:ZDB-GENE-060526-329]
49. btr20 ENSDARG00000102992 4 1 - - - - - 1.000 - - - bloodthirsty-related gene family, member 20 [Source:ZFIN;Acc:ZDB-GENE-060421-3419]
50. isl1l ENSDARG00000021055, ENSDARG00000110204 4 1 - - - - - 1.000 - - - islet1, like [Source:ZFIN;Acc:ZDB-GENE-040624-1]
51. atg9b ENSDARG00000055292 155 1 - - - - - 1.000 - - - autophagy related 9B [Source:ZFIN;Acc:ZDB-GENE-091111-3]
52. cx45.6 cx45.6 26 1 - - - - - 1.000 - - -
53. si:dkey-25o1.5 si:dkey-25o1.5 5 1 - - - - - 1.000 - - -
54. LRTM1 ENSDARG00000098742 21 1 - - - - - 1.000 - - - leucine rich repeats and transmembrane domains 1 [Source:ZFIN;Acc:ZDB-GENE-161221-2]
55. LRP3 ENSDARG00000008485 1401 1 - - - 1.000 - - - - - low density lipoprotein receptor-related protein 3 [Source:ZFIN;Acc:ZDB-GENE-080116-3]
56. SLC22A14 SLC22A14 24 1 1.000 - - - - - - - -
57. CR352256.1 CR352256.1 3 1 1.000 - - - - - - - -
58. npdc1 npdc1 221 1 1.000 - - - - - - - -
59. sema6d ENSDARG00000002748 133 1 1.000 - - - - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:ZFIN;Acc:ZDB-GENE-040426-1933]
60. zgc:172051 ENSDARG00000086569 12 1 - - - - - 1.000 - - - zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
61. irg1 22 1 - - - - - 1.000 - - - immunoresponsive 1 homolog (mouse)
62. si:ch211-212b13.1 si:ch211-212b13.1 1 1 - - - - - 1.000 - - -
63. SPP2 ENSDARG00000095590 5 1 - - - - - 1.000 - - - secreted phosphoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-223]
64. adra1bb ENSDARG00000041173, ENSDARG00000116032 5 1 - - - - - 1.000 - - - adrenoceptor alpha 1Bb [Source:ZFIN;Acc:ZDB-GENE-041114-51]
65. DNAJC11 1 1 - - - - - 1.000 - - - DnaJ heat shock protein family (Hsp40) member C11
66. zgc:152857 ENSDARG00000041034 7 1 - - - - - 1.000 - - - zgc:152857 [Source:ZFIN;Acc:ZDB-GENE-060929-72]
67. TTC34 ENSDARG00000091221 3 1 - - - - - 1.000 - - - tetratricopeptide repeat domain 34 [Source:ZFIN;Acc:ZDB-GENE-140106-266]
68. si:rp71-26b20.1 si:rp71-26b20.1 11 1 - - - - - 1.000 - - -
69. TRIM14_5 TRIM14_5 2 1 - - - - - 1.000 - - -
70. ncf4 ENSDARG00000040812, ENSDARG00000110339 45 1 1.000 - - - - - - - - neutrophil cytosolic factor 4 [Source:ZFIN;Acc:ZDB-GENE-041124-1]
71. sts ENSDARG00000053241 10 1 - - - - - 1.000 - - - steroid sulfatase (microsomal), isozyme S [Source:ZFIN;Acc:ZDB-GENE-030717-5]
72. pola2 ENSDARG00000015070 2286 1 - - - 1.000 - - - - - polymerase (DNA directed), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-778]
73. cnot7 ENSDARG00000032116, ENSDARG00000115413 184 1 1.000 - - - - - - - - CCR4-NOT transcription complex, subunit 7 [Source:ZFIN;Acc:ZDB-GENE-061013-29]
74. si:ch211-66k16.28 ENSDARG00000088423 80 1 - - - - - 1.000 - - - si:ch211-66k16.28 [Source:ZFIN;Acc:ZDB-GENE-120709-59]
75. ucn3l ENSDARG00000087241 29 1 - - - - - 1.000 - - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
76. grifin ENSDARG00000033382 141 1 - - - - - 1.000 - - - galectin-related inter-fiber protein [Source:ZFIN;Acc:ZDB-GENE-040801-163]
77. rp1 ENSDARG00000077687 18 1 1.000 - - - - - - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
78. tcf3a ENSDARG00000005915 12 1 1.000 - - - - - - - - transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-51]
79. admb ENSDARG00000069027 67 1 1.000 - - - - - - - - adrenomedullin b [Source:ZFIN;Acc:ZDB-GENE-120221-6]
80. cnga3b ENSDARG00000012297 2 1 - - - - - 1.000 - - - cyclic nucleotide gated channel alpha 3b [Source:ZFIN;Acc:ZDB-GENE-090312-121]
81. bcl9l ENSDARG00000055054 128 1 1.000 - - - - - - - - B cell CLL/lymphoma 9-like [Source:ZFIN;Acc:ZDB-GENE-040927-29]
82. MPP3 MPP3 13 1 - - - - - 1.000 - - -
83. si:dkey-15h8.1 si:dkey-15h8.1 17 1 - - - - - 1.000 - - -
84. chrna7 ENSDARG00000101702 50 1 1.000 - - - - - - - - cholinergic receptor, nicotinic, alpha 7 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-040108-3]
85. si:ch1073-418f12.2 si:ch1073-418f12.2 15 1 - - - - - 1.000 - - -
86. BX005472.1 BX005472.1 2 1 - - - - - 1.000 - - -
87. fndc7 fndc7 3 1 - - - - - 1.000 - - -
88. CD53 CD53 108 1 1.000 - - - - - - - -
89. gorasp1 gorasp1 3075 1 - - - 1.000 - - - - -
90. zgc:110353 ENSDARG00000039443 80 1 1.000 - - - - - - - - zgc:110353 [Source:ZFIN;Acc:ZDB-GENE-050417-310]
91. ftr24 ENSDARG00000008396, ENSDARG00000112253 1652 1 - - - 1.000 - - - - - finTRIM family, member 24 [Source:ZFIN;Acc:ZDB-GENE-050731-2]
92. si:ch211-171b20.3 ENSDARG00000094794 2 1 1.000 - - - - - - - - si:ch211-171b20.3 [Source:ZFIN;Acc:ZDB-GENE-091204-278]
93. ranbp1 ENSDARG00000014817 3371 1 - - - 1.000 - - - - - RAN binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2548]
94. ft2 ENSDARG00000109567 5 1 1.000 - - - - - - - - alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
95. CDH24_1 CDH24_1 7 1 - - - - - 1.000 - - -
96. crfb4 ENSDARG00000068711 51 1 - - - - - 1.000 - - - cytokine receptor family member b4 [Source:ZFIN;Acc:ZDB-GENE-070905-3]
97. si:ch211-203k16.3 ENSDARG00000069305 21 1 - - - - - 1.000 - - - si:ch211-203k16.3 [Source:ZFIN;Acc:ZDB-GENE-041014-290]
98. C3H16orf89 C3H16orf89 449 1 1.000 - - - - - - - -
99. uckl1b ENSDARG00000078973 2237 1 - - - 1.000 - - - - - uridine-cytidine kinase 1-like 1b [Source:ZFIN;Acc:ZDB-GENE-090311-45]
100. zp2l1 ENSDARG00000055415, ENSDARG00000110573 2 1 1.000 - - - - - - - - zona pellucida glycoprotein 2, like 1 [Source:ZFIN;Acc:ZDB-GENE-060818-3]

There are 806 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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