Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for opn4b

Gene Name Gene ID Reads Annotation
opn4b ENSDARG00000053929 143 opsin 4b [Source:ZFIN;Acc:ZDB-GENE-080415-3]










Genes with expression patterns similar to opn4b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. opn4b ENSDARG00000053929 143 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 opsin 4b [Source:ZFIN;Acc:ZDB-GENE-080415-3]
2. BX001033.2 BX001033.2 857 2.402 0.850 0.724 - - - - 0.828 - -
3. fes ENSDARG00000011449 46 1.658 0.724 - - - - 0.934 - - - FES proto-oncogene, tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-100812-10]
4. med30 ENSDARG00000101115 133 1.635 0.716 - - - - 0.919 - - - mediator complex subunit 30 [Source:ZFIN;Acc:ZDB-GENE-040426-1676]
5. NAT14 ENSDARG00000115349 21 1.632 0.724 - - - - 0.908 - - - N-acetyltransferase 14 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-060825-15]
6. ccdc41 ccdc41 97 1.63 - - - - - 0.908 0.722 - -
7. BX323793.3 BX323793.3 7 1.63 - - - - - 0.908 0.722 - -
8. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 1.63 - - - - - 0.908 0.722 - - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
9. CR356223.1 ENSDARG00000093865 1 1.63 - - - - - 0.908 0.722 - -
10. poc5 ENSDARG00000059982 569 1.629 - - - - - 0.902 0.727 - - POC5 centriolar protein homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-060526-135]
11. dab1a ENSDARG00000059939 46 1.615 0.751 - - - - - 0.864 - - Dab, reelin signal transducer, homolog 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060528-1]
12. CU855821.2 CU855821.2 21 1.611 0.724 - - - - - 0.887 - -
13. ube2d4 ENSDARG00000015057 1089 1.608 0.761 0.847 - - - - - - - ubiquitin-conjugating enzyme E2D 4 (putative) [Source:ZFIN;Acc:ZDB-GENE-070424-86]
14. lgr6 181 1.592 0.834 0.758 - - - - - - - leucine rich repeat containing G protein-coupled receptor 6
15. rsph3 ENSDARG00000043470 74 1.58 - 0.729 - - - 0.851 - - - radial spoke head 3 homolog [Source:ZFIN;Acc:ZDB-GENE-040724-173]
16. CR391961.2 CR391961.2 107 1.557 - - - - - 0.788 0.769 - -
17. SURF2 ENSDARG00000112476 592 1.557 0.743 0.814 - - - - - - - surfeit 2 [Source:ZFIN;Acc:ZDB-GENE-040801-86]
18. CU633479.5 ENSDARG00000114818 1815 1.532 0.735 0.797 - - - - - - -
19. tgm1l1 ENSDARG00000102106 1437 1.529 0.779 0.750 - - - - - - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
20. si:ch211-242b18.1 ENSDARG00000054723 2929 1.527 0.734 0.793 - - - - - - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
21. si:ch211-250g4.3 ENSDARG00000092945 150 1.518 - 0.768 - - - 0.750 - - - si:ch211-250g4.3 [Source:ZFIN;Acc:ZDB-GENE-060503-506]
22. bokb ENSDARG00000008807 29 1.516 - - - - 0.737 0.779 - - - BOK, BCL2 family apoptosis regulator b [Source:ZFIN;Acc:ZDB-GENE-040426-1346]
23. dcaf15 ENSDARG00000077790 1039 1.515 - - - - - 0.723 0.792 - - DDB1 and CUL4 associated factor 15 [Source:ZFIN;Acc:ZDB-GENE-030131-2374]
24. CR392006.1 CR392006.1 1401 1.512 0.802 0.710 - - - - - - -
25. notum2 ENSDARG00000088411 823 1.509 0.769 0.740 - - - - - - - notum pectinacetylesterase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-77]
26. peli1a ENSDARG00000091592 119 1.49 0.751 - - - - - 0.739 - - pellino E3 ubiquitin protein ligase 1a [Source:ZFIN;Acc:ZDB-GENE-110310-6]
27. si:dkey-285e18.8 si:dkey-285e18.8 170 1.478 0.718 0.760 - - - - - - -
28. TMPO TMPO 3264 1.477 0.725 0.752 - - - - - - -
29. crfb1 ENSDARG00000068681, ENSDARG00000111369, ENSDARG00000112496 75 1.469 - 0.715 - - - - 0.754 - - cytokine receptor family member b1 [Source:ZFIN;Acc:ZDB-GENE-030131-8673]
30. FP243385.1 FP243385.1 29 1.462 0.701 0.761 - - - - - - -
31. kcnj8 ENSDARG00000045589 92 1.462 0.716 - - - - 0.746 - - - potassium inwardly-rectifying channel, subfamily J, member 8 [Source:ZFIN;Acc:ZDB-GENE-060308-1]
32. nr4a2b ENSDARG00000044532 103 1.459 0.715 - - - - 0.744 - - - nuclear receptor subfamily 4, group A, member 2b [Source:ZFIN;Acc:ZDB-GENE-040718-103]
33. C13H10orf71 3489 1.451 0.701 0.750 - - - - - - - chromosome 13 C10orf71 homolog
34. fxn ENSDARG00000074356 524 1.445 0.712 0.733 - - - - - - - frataxin [Source:ZFIN;Acc:ZDB-GENE-070209-286]
35. si:dkey-5n7.2 ENSDARG00000102339 42 1.443 0.724 0.719 - - - - - - - si:dkey-5n7.2 [Source:ZFIN;Acc:ZDB-GENE-050420-254]
36. sc:d0661 sc:d0661 12 1.435 - - - - 0.713 - 0.722 - -
37. C20H2orf70 C20H2orf70 8 1.427 - - - - - - 0.722 - 0.705
38. GM2A ENSDARG00000088439 55 1.417 - - - - - 0.702 - - 0.715 GM2 ganglioside activator [Source:ZFIN;Acc:ZDB-GENE-050417-373]
39. trim108 ENSDARG00000061762, ENSDARG00000114698 5 1 - - - - - - 1.000 - - tripartite motif containing 108 [Source:ZFIN;Acc:ZDB-GENE-060503-670]
40. CABZ01072828.1 CABZ01072828.1 67 1 - - - - - - 1.000 - -
41. zgc:162724 zgc:162724 9 1 - - - - - - 1.000 - -
42. si:dkeyp-25a3.1 si:dkeyp-25a3.1 4 0.974 - - - - - 0.974 - - -
43. C20H20orf26 C20H20orf26 4 0.964 - - - - - 0.964 - - -
44. BX927314.1 BX927314.1 47 0.964 - - - - - 0.964 - - -
45. gas5 279 0.964 - - - - - 0.964 - - - growth arrest-specific 5, transcript variant X4
46. zgc:171844 ENSDARG00000067813 30 0.964 - - - - - 0.964 - - - zgc:171844 [Source:ZFIN;Acc:ZDB-GENE-080516-8]
47. adamts13 ENSDARG00000076270 8 0.964 - - - - - 0.964 - - - ADAM metallopeptidase with thrombospondin type 1 motif, 13 [Source:ZFIN;Acc:ZDB-GENE-070814-7]
48. gdf7 ENSDARG00000042784 36 0.964 - - - - - 0.964 - - - growth differentiation factor 7 [Source:ZFIN;Acc:ZDB-GENE-990714-1]
49. si:dkey-163m14.6 5 0.964 - - - - - 0.964 - - - si:dkey-163m14.6
50. si:busm1-266f07.2 ENSDARG00000031745 19 0.964 - - - - - 0.964 - - - si:busm1-266f07.2 [Source:ZFIN;Acc:ZDB-GENE-030616-436]
51. FAIM2 FAIM2 43 0.959 - - - - - 0.959 - - -
52. AL840638.1 ENSDARG00000098608 104 0.947 - - - - - - 0.947 - -
53. wdyhv1 ENSDARG00000070403 42 0.94 - - - - - 0.940 - - - WDYHV motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-848]
54. EPS8 78 0.935 - - - - - 0.935 - - - epidermal growth factor receptor pathway substrate 8, transcript variant X14
55. si:dkeyp-87a6.1 si:dkeyp-87a6.1 118 0.93 - - - - - 0.930 - - -
56. FHDC1_3 FHDC1_3 66 0.929 - - - - - 0.929 - - -
57. atmin ENSDARG00000068601 24 0.928 - - - - - 0.928 - - - ATM interactor [Source:ZFIN;Acc:ZDB-GENE-030616-220]
58. cd151l ENSDARG00000068629 16 0.922 - - - - - 0.922 - - - CD151 antigen, like [Source:ZFIN;Acc:ZDB-GENE-040426-1868]
59. penkb ENSDARG00000036045 304 0.919 - - - - - - 0.919 - - proenkephalin b [Source:ZFIN;Acc:ZDB-GENE-030729-3]
60. wdr78 ENSDARG00000044400, ENSDARG00000109570 48 0.918 - - - - - 0.918 - - - WD repeat domain 78 [Source:ZFIN;Acc:ZDB-GENE-050522-322]
61. btbd6b ENSDARG00000032369, ENSDARG00000114044 692 0.909 - 0.909 - - - - - - - BTB (POZ) domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-030829-65]
62. oscp1a ENSDARG00000101222, ENSDARG00000104403 17 0.908 - - - - - 0.908 - - - organic solute carrier partner 1a [Source:ZFIN;Acc:ZDB-GENE-080204-2]
63. zgc:153759 ENSDARG00000068969, ENSDARG00000092381 44 0.908 - - - - - 0.908 - - - zgc:153759 [Source:ZFIN;Acc:ZDB-GENE-060825-148]
64. PRTFDC1 ENSDARG00000011683 11 0.908 - - - - - 0.908 - - - phosphoribosyl transferase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-980526-324]
65. URB1 ENSDARG00000060308 78 0.908 - - - - - 0.908 - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
66. TMEM121_1 TMEM121_1 22 0.908 - - - - - 0.908 - - -
67. CABZ01112210.1 CABZ01112210.1 48 0.908 - - - - - 0.908 - - -
68. crybb1l2 ENSDARG00000016793 723 0.908 - - - - - 0.908 - - - crystallin, beta B1, like 2 [Source:ZFIN;Acc:ZDB-GENE-070822-18]
69. ccdc14 ENSDARG00000098734 3 0.908 - - - - - 0.908 - - - coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
70. irf1b ENSDARG00000043249 30 0.908 - - - - - 0.908 - - - interferon regulatory factor 1b [Source:ZFIN;Acc:ZDB-GENE-041114-13]
71. rhobtb2b ENSDARG00000089340 4 0.908 - - - - - 0.908 - - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
72. syt6a ENSDARG00000076730 4 0.908 - - - - - 0.908 - - - synaptotagmin VIa [Source:ZFIN;Acc:ZDB-GENE-090601-2]
73. C12H16orf93 C12H16orf93 1 0.908 - - - - - 0.908 - - -
74. CABZ01060813.1 CABZ01060813.1 12 0.908 - - - - - 0.908 - - -
75. vtg3 ENSDARG00000016448 8 0.908 - - - - - 0.908 - - - vitellogenin 3, phosvitinless [Source:ZFIN;Acc:ZDB-GENE-991019-2]
76. pigf ENSDARG00000032780 7 0.908 - - - - - 0.908 - - - phosphatidylinositol glycan anchor biosynthesis, class F [Source:ZFIN;Acc:ZDB-GENE-040426-1801]
77. TGFBR2 TGFBR2 2 0.908 - - - - - 0.908 - - -
78. TESPA1 ENSDARG00000053311 29 0.908 - - - - - 0.908 - - - thymocyte expressed, positive selection associated 1 [Source:ZFIN;Acc:ZDB-GENE-120727-10]
79. il17c ENSDARG00000057180, ENSDARG00000109701 3 0.908 - - - - - 0.908 - - - interleukin 17c [Source:ZFIN;Acc:ZDB-GENE-061031-5]
80. si:ch211-219a15.3 ENSDARG00000087659 12 0.908 - - - - - 0.908 - - - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
81. pdk3a ENSDARG00000014527 15 0.908 - - - - - 0.908 - - - pyruvate dehydrogenase kinase, isozyme 3a [Source:ZFIN;Acc:ZDB-GENE-061220-3]
82. si:ch211-125e6.12 ENSDARG00000092090 3 0.908 - - - - - 0.908 - - - si:ch211-125e6.12 [Source:ZFIN;Acc:ZDB-GENE-070912-36]
83. NOX4 3 0.908 - - - - - 0.908 - - - NADPH oxidase 4
84. FAM196A 82 0.908 - - - - - 0.908 - - - family with sequence similarity 196 member A
85. themis ENSDARG00000010619 5 0.908 - - - - - 0.908 - - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
86. v2rh11 ENSDARG00000115088 1 0.908 - - - - - 0.908 - - - vomeronasal 2 receptor, h11 [Source:ZFIN;Acc:ZDB-GENE-050419-222]
87. syndig1l ENSDARG00000042390, ENSDARG00000113400 17 0.908 - - - - - 0.908 - - - synapse differentiation inducing 1-like [Source:ZFIN;Acc:ZDB-GENE-041001-116]
88. slc25a19 ENSDARG00000100385 2 0.908 - - - - - 0.908 - - - solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 [Source:ZFIN;Acc:ZDB-GENE-050417-292]
89. HMGXB3 ENSDARG00000077823 2 0.908 - - - - - 0.908 - - - HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
90. ripply2 ENSDARG00000070535 18 0.908 - - - - - 0.908 - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
91. m17 ENSDARG00000035435 28 0.908 - - - - - 0.908 - - - IL-6 subfamily cytokine M17 [Source:ZFIN;Acc:ZDB-GENE-060526-368]
92. CMA1_8 CMA1_8 10 0.908 - - - - - 0.908 - - -
93. CELA1_2 CELA1_2 2 0.908 - - - - - 0.908 - - -
94. NMI 3 0.908 - - - - - 0.908 - - - N-myc (and STAT) interactor
95. BICD1 BICD1 9 0.908 - - - - - 0.908 - - -
96. BX284672.1 BX284672.1 11 0.908 - - - - - 0.908 - - -
97. POGK POGK 1 0.908 - - - - - 0.908 - - -
98. gp1bb ENSDARG00000074441 116 0.908 - - - - - 0.908 - - - glycoprotein Ib platelet subunit beta [Source:ZFIN;Acc:ZDB-GENE-081104-406]
99. si:dkey-119g10.4 si:dkey-119g10.4 7 0.908 - - - - - 0.908 - - -
100. trpm5 ENSDARG00000059792 3 0.908 - - - - - 0.908 - - - transient receptor potential cation channel, subfamily M, member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-736]

There are 963 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA