Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for opn3

Gene Name Gene ID Reads Annotation
opn3 ENSDARG00000052775 8 opsin 3 [Source:ZFIN;Acc:ZDB-GENE-080227-16]










Genes with expression patterns similar to opn3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. opn3 ENSDARG00000052775 8 5 - - 1.000 1.000 1.000 - - 1.000 1.000 opsin 3 [Source:ZFIN;Acc:ZDB-GENE-080227-16]
2. si:ch211-229d2.5 ENSDARG00000079119 95 1.951 - - 0.967 - 0.984 - - - - si:ch211-229d2.5 [Source:ZFIN;Acc:ZDB-GENE-121214-200]
3. FETUB ENSDARG00000053973 4 1.929 - - 0.929 - - - - 1.000 - fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
4. fndc7 fndc7 3 1.834 - - 0.850 - 0.984 - - - -
5. si:dkeyp-25a3.1 si:dkeyp-25a3.1 4 1.804 - - - - - - - 1.000 0.804
6. HIST2H4B HIST2H4B 9 1.788 - - - - 0.984 - - - 0.804
7. cda 3 1.75 - - - - 0.946 - - - 0.804 cytidine deaminase
8. nkx2.5 ENSDARG00000018004, ENSDARG00000116714 23 1.717 - - - 0.813 - - - 0.904 - NK2 homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-321]
9. CABZ01057951.1 CABZ01057951.1 10 1.643 - - 0.839 - - - - - 0.804
10. RPS6KL1 ENSDARG00000079024 22 1.522 - - - - 0.814 - - - 0.708 ribosomal protein S6 kinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-111020-10]
11. FP245465.3 FP245465.3 5 1 - - - - - - - 1.000 -
12. HELZ2_2 ENSDARG00000012600 5 1 - - - - - - - 1.000 - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
13. ryr2b ENSDARG00000003706 6 1 - - - - - - - 1.000 - ryanodine receptor 2b (cardiac) [Source:ZFIN;Acc:ZDB-GENE-061226-3]
14. si:dkeyp-35e5.10 ENSDARG00000107425 8 1 - - - - - - - 1.000 - si:dkeyp-35e5.10 [Source:ZFIN;Acc:ZDB-GENE-110913-63]
15. C1QL1 1 1 - - - - - - - 1.000 - complement C1q like 1
16. ERC2 ENSDARG00000105178 0 1 - - - - - - - 1.000 - ELKS/RAB6-interacting/CAST family member 2 [Source:ZFIN;Acc:ZDB-GENE-130530-700]
17. spo11 ENSDARG00000013837 7 1 - - - - - - - 1.000 - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
18. si:dkey-121n8.5 si:dkey-121n8.5 10 1 - - - - - - - 1.000 -
19. panx3 ENSDARG00000004627 7 1 - - - - - - - 1.000 - pannexin 3 [Source:ZFIN;Acc:ZDB-GENE-091204-114]
20. BX571969.1 BX571969.1 8 1 - - - - - - - 1.000 -
21. AL935293.1 AL935293.1 2 1 - - - - - - - 1.000 -
22. CARD10 CARD10 0 1 - - - - - - - 1.000 -
23. B2M ENSDARG00000053136 2 1 - - - - 1.000 - - - - beta-2-microglobulin [Source:ZFIN;Acc:ZDB-GENE-980526-88]
24. cnfn ENSDARG00000041115 21 1 - - - - - - - 1.000 - cornifelin [Source:ZFIN;Acc:ZDB-GENE-040912-110]
25. inpp5jb ENSDARG00000093359 4 1 - - - - - - - 1.000 - inositol polyphosphate-5-phosphatase Jb [Source:ZFIN;Acc:ZDB-GENE-081104-46]
26. aste1 5 1 - - - - - - - 1.000 - asteroid homolog 1 (Drosophila)
27. si:ch211-79h18.2 6 1 - - - - - - - 1.000 - si:ch211-79h18.2, transcript variant X4
28. GPR108_1 GPR108_1 2 1 - - - - - - - 1.000 -
29. has1 ENSDARG00000042983 2 1 - - - - - - - 1.000 - hyaluronan synthase 1 [Source:ZFIN;Acc:ZDB-GENE-040218-2]
30. si:dkey-54j5.1 si:dkey-54j5.1 4 1 - - - - - - - 1.000 -
31. KNCN ENSDARG00000101899 1 1 - - - - - - - 1.000 - kinocilin [Source:ZFIN;Acc:ZDB-GENE-070705-385]
32. si:dkeyp-79f12.7 si:dkeyp-79f12.7 5 1 - - - - - - - 1.000 -
33. trhra ENSDARG00000076546 3 1 - - - - - - - 1.000 - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
34. ms4a17a.1 ENSDARG00000043798 7 1 - - - - - - - 1.000 - membrane-spanning 4-domains, subfamily A, member 17A.1 [Source:ZFIN;Acc:ZDB-GENE-050417-307]
35. cnga1 1 1 - - - - - - - 1.000 - cyclic nucleotide gated channel alpha 1
36. si:dkeyp-68b7.5 ENSDARG00000079930 14 1 - - - - - - - 1.000 - si:dkeyp-68b7.5 [Source:ZFIN;Acc:ZDB-GENE-070912-670]
37. si:dkey-256i11.4 si:dkey-256i11.4 3 1 - - - - 1.000 - - - -
38. si:dkey-220a11.9 si:dkey-220a11.9 10 1 - - - - 1.000 - - - -
39. tecpr1a ENSDARG00000062515 7 1 - - - - - - - 1.000 - tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
40. si:ch211-113a14.15_1 2 1 - - - - - - - 1.000 - si:ch211-113a14.15
41. CU459094.1 ENSDARG00000110517 17 1 - - - - - - - 1.000 - uncharacterized LOC108191666 [Source:NCBI gene;Acc:108191666]
42. mtx3_1 ENSDARG00000090195 12 1 - - - - - - - 1.000 - metaxin 3 [Source:ZFIN;Acc:ZDB-GENE-021210-3]
43. CU694807.2 CU694807.2 5 1 - - - - - - - 1.000 -
44. cabp7b ENSDARG00000060846 5 1 - - - - 1.000 - - - - calcium binding protein 7b [Source:ZFIN;Acc:ZDB-GENE-060526-366]
45. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 1 - - - - - - - 1.000 - protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]
46. BX897671.1 BX897671.1 10 1 - - - - - - - 1.000 -
47. DOCK1 ENSDARG00000099093 21 1 - - - - - - - - 1.000 dedicator of cytokinesis 1 [Source:ZFIN;Acc:ZDB-GENE-080108-5]
48. BX321875.5 BX321875.5 1 1 - - - - - - - 1.000 -
49. CABZ01058107.1 ENSDARG00000112826 8 1 - - - - - - - 1.000 - C-type lectin domain family 4 member M-like [Source:NCBI gene;Acc:110440085]
50. si:ch211-201b11.3 si:ch211-201b11.3 2 1 - - - - - - - 1.000 -
51. BX004785.2 ENSDARG00000093487 10 1 - - - - - - - 1.000 -
52. si:dkey-16p19.8 ENSDARG00000096481 6 1 - - - - - - - 1.000 - si:dkey-16p19.8 [Source:ZFIN;Acc:ZDB-GENE-120709-67]
53. CMA1_12 CMA1_12 0 1 - - - - - - - 1.000 -
54. CABZ01075923.1 CABZ01075923.1 6 1 - - - - - - - 1.000 -
55. paqr8 ENSDARG00000088828 4 1 - - - - - - - 1.000 - progestin and adipoQ receptor family member VIII [Source:ZFIN;Acc:ZDB-GENE-030728-3]
56. BX248410.2 ENSDARG00000090277 4 1 - - - - - - - 1.000 - sialic acid-binding Ig-like lectin 7 [Source:NCBI gene;Acc:103910452]
57. rxfp3.3a3 ENSDARG00000069246 5 1 - - - - - - - 1.000 - relaxin family peptide receptor 3.3a3 [Source:ZFIN;Acc:ZDB-GENE-050419-246]
58. CABZ01112215.1 CABZ01112215.1 23 1 - - - - - - - 1.000 -
59. CABZ01049025.1 CABZ01049025.1 1 1 - - - - - - - 1.000 -
60. gltpb ENSDARG00000077962 5 0.996 - - - - 0.996 - - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
61. clcn1a ENSDARG00000062084 120 0.986 - - - - 0.986 - - - - chloride channel, voltage-sensitive 1a [Source:ZFIN;Acc:ZDB-GENE-060503-333]
62. lhcgr ENSDARG00000026081 2 0.984 - - - - 0.984 - - - - luteinizing hormone/choriogonadotropin receptor [Source:ZFIN;Acc:ZDB-GENE-040806-3]
63. SLC5A10 ENSDARG00000074212 11 0.984 - - - - 0.984 - - - - solute carrier family 5 member 10 [Source:HGNC Symbol;Acc:HGNC:23155]
64. zgc:175136 ENSDARG00000103024 4 0.984 - - - - 0.984 - - - - zgc:175136 [Source:ZFIN;Acc:ZDB-GENE-080204-122]
65. hfm1 ENSDARG00000104288 9 0.984 - - - - 0.984 - - - - HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061207-43]
66. tecrl2a ENSDARG00000089485 12 0.984 - - - - 0.984 - - - - trans-2,3-enoyl-CoA reductase-like 2a [Source:ZFIN;Acc:ZDB-GENE-131121-138]
67. itih6 ENSDARG00000056037 3 0.984 - - - - 0.984 - - - - inter-alpha-trypsin inhibitor heavy chain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-050603-1]
68. irbp 2 0.984 - - - - 0.984 - - - - interphotoreceptor retinoid-binding protein, transcript variant X2
69. ATP6V1C2 ENSDARG00000070440 2 0.984 - - - - 0.984 - - - - ATPase H+ transporting V1 subunit C2 [Source:ZFIN;Acc:ZDB-GENE-131127-65]
70. si:dkey-79i2.4 ENSDARG00000094710 1 0.984 - - - - 0.984 - - - - si:dkey-79i2.4 [Source:ZFIN;Acc:ZDB-GENE-060503-553]
71. cyp1c2 ENSDARG00000101789 3 0.984 - - - - 0.984 - - - - cytochrome P450, family 1, subfamily C, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050705-1]
72. ifit5 ifit5 12 0.984 - - - - 0.984 - - - -
73. AL929276.2 ENSDARG00000116984 2 0.984 - - - - 0.984 - - - -
74. tmem244 ENSDARG00000043847 3 0.984 - - - - 0.984 - - - - transmembrane protein 244 [Source:ZFIN;Acc:ZDB-GENE-040724-54]
75. SSTR2_1 SSTR2_1 1 0.984 - - - - 0.984 - - - -
76. si:dkey-240n22.6 ENSDARG00000089296, ENSDARG00000106998 3 0.984 - - - - 0.984 - - - - si:dkey-240n22.6 [Source:ZFIN;Acc:ZDB-GENE-070705-411]
77. GPR116_1 GPR116_1 1 0.984 - - - - 0.984 - - - -
78. CU896602.1 ENSDARG00000071461 1 0.984 - - - - 0.984 - - - -
79. jupb ENSDARG00000059067 1 0.984 - - - - 0.984 - - - - junction plakoglobin b [Source:ZFIN;Acc:ZDB-GENE-110407-10]
80. zgc:123284 ENSDARG00000102720 1 0.984 - - - - 0.984 - - - - zgc:123284 [Source:ZFIN;Acc:ZDB-GENE-051113-92]
81. si:dkey-182i3.11 ENSDARG00000069270 3 0.984 - - - - 0.984 - - - - si:dkey-182i3.11 [Source:ZFIN;Acc:ZDB-GENE-121214-258]
82. papd4 3 0.984 - - - - 0.984 - - - - PAP associated domain containing 4, transcript variant X1
83. si:dkeyp-82h4.1 ENSDARG00000096463 18 0.984 - - - - 0.984 - - - - si:dkeyp-82h4.1 [Source:ZFIN;Acc:ZDB-GENE-120709-49]
84. chrnb3b ENSDARG00000038508 7 0.984 - - - - 0.984 - - - - cholinergic receptor, nicotinic, beta 3b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-030102-4]
85. ghrl ENSDARG00000054239 4 0.984 - - - - 0.984 - - - - ghrelin/obestatin prepropeptide [Source:ZFIN;Acc:ZDB-GENE-070622-2]
86. CABZ01044611.1 CABZ01044611.1 8 0.984 - - - - 0.984 - - - -
87. gck ENSDARG00000068006 14 0.984 - - - - 0.984 - - - - glucokinase (hexokinase 4) [Source:ZFIN;Acc:ZDB-GENE-060825-204]
88. si:dkey-233e3.4 si:dkey-233e3.4 3 0.984 - - - - 0.984 - - - -
89. aadacl4 ENSDARG00000044802 2 0.984 - - - - 0.984 - - - - arylacetamide deacetylase-like 4 [Source:ZFIN;Acc:ZDB-GENE-080919-2]
90. CR753886.1 ENSDARG00000090548 22 0.984 - - - - 0.984 - - - - prolactin releasing hormone 2 [Source:NCBI gene;Acc:793765]
91. cyp2k19 ENSDARG00000101861 129 0.984 - - - - 0.984 - - - - cytochrome P450, family 2, subfamily k, polypeptide 19 [Source:ZFIN;Acc:ZDB-GENE-091211-1]
92. trpc5a ENSDARG00000070504 5 0.984 - - - - 0.984 - - - - transient receptor potential cation channel, subfamily C, member 5a [Source:ZFIN;Acc:ZDB-GENE-040812-1]
93. si:ch211-226f6.1 ENSDARG00000094038 1 0.984 - - - - 0.984 - - - - si:ch211-226f6.1 [Source:ZFIN;Acc:ZDB-GENE-070912-217]
94. si:dkey-122c11.7 ENSDARG00000103721 3 0.984 - - - - 0.984 - - - - si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120]
95. CU633740.2 CU633740.2 16 0.984 - - - - 0.984 - - - -
96. Metazoa_SRP_12 Metazoa_SRP_12 1 0.984 - - - - 0.984 - - - -
97. BX511173.1 ENSDARG00000095842 7 0.984 - - - - 0.984 - - - -
98. si:ch211-122l14.7 ENSDARG00000095576 5 0.984 - - - - 0.984 - - - - si:ch211-122l14.7 [Source:ZFIN;Acc:ZDB-GENE-041014-263]
99. si:ch211-198f4.4 si:ch211-198f4.4 1 0.984 - - - - 0.984 - - - -
100. cabp2a ENSDARG00000052016 19 0.984 - - - - 0.984 - - - - calcium binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050913-25]

There are 309 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA