Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for opn1lw2

Gene Name Gene ID Reads Annotation
opn1lw2 ENSDARG00000044861, ENSDARG00000115709 277 opsin 1 (cone pigments), long-wave-sensitive, 2 [Source:ZFIN;Acc:ZDB-GENE-040718-141]










Genes with expression patterns similar to opn1lw2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. opn1lw2 ENSDARG00000044861, ENSDARG00000115709 277 4 - - - 1.000 1.000 - - 1.000 1.000 opsin 1 (cone pigments), long-wave-sensitive, 2 [Source:ZFIN;Acc:ZDB-GENE-040718-141]
2. UNC119 UNC119 104 3.533 - - - 1.000 0.733 - - 0.858 0.942
3. ETV3L ETV3L 67 3.448 - - - 0.979 0.790 - - 0.767 0.912
4. guca1g ENSDARG00000045737, ENSDARG00000114717 22 2.572 - - - 0.858 0.733 - - - 0.981 guanylate cyclase activator 1g [Source:ZFIN;Acc:ZDB-GENE-050120-1]
5. RCVRN_1 RCVRN_1 46 2.486 - - - - 0.816 - - 0.768 0.902
6. slc6a2 ENSDARG00000016141 49 2.461 - - - - 0.755 - - 0.767 0.939 solute carrier family 6 (neurotransmitter transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-110408-4]
7. sagb ENSDARG00000038378 28 2.433 - - - - 0.733 - - 0.765 0.935 S-antigen; retina and pineal gland (arrestin) b [Source:ZFIN;Acc:ZDB-GENE-050913-98]
8. stxbp1b ENSDARG00000056036, ENSDARG00000112938 84 2.321 - - - - 0.707 - - 0.747 0.867 syntaxin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060531-166]
9. nr2e3 ENSDARG00000045904, ENSDARG00000113178 208 2.251 - - - 0.840 0.704 - - 0.707 - nuclear receptor subfamily 2, group E, member 3 [Source:ZFIN;Acc:ZDB-GENE-041114-63]
10. syt5a ENSDARG00000037941 81 1.954 - - - - - - - 0.967 0.987 synaptotagmin Va [Source:ZFIN;Acc:ZDB-GENE-040718-110]
11. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1.902 - - - 1.000 - - - - 0.902 guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
12. si:ch211-10j20.1 si:ch211-10j20.1 24 1.896 - - - 1.000 - - - - 0.896
13. zgc:158340 zgc:158340 21 1.89 - - - 0.918 - - - - 0.972
14. pdcb ENSDARG00000017634 10 1.872 - - - 0.970 - - - - 0.902 phosducin b [Source:ZFIN;Acc:ZDB-GENE-031023-2]
15. si:ch73-211l2.1 605 1.845 - - - - - - - 0.900 0.945 si:ch73-211l2.1
16. fut9d ENSDARG00000028098 427 1.833 - - - - - - - 0.908 0.925 fucosyltransferase 9d [Source:ZFIN;Acc:ZDB-GENE-050309-15]
17. gngt1 ENSDARG00000035798, ENSDARG00000116914 255 1.832 - - - - - - - 0.911 0.921 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7596]
18. ponzr3 ENSDARG00000088589, ENSDARG00000116407 1373 1.799 - - - - - - - 0.919 0.880 plac8 onzin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-050506-38]
19. gnb3b ENSDARG00000002696 46 1.739 - - - - - - - 0.768 0.971 guanine nucleotide binding protein (G protein), beta polypeptide 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2280]
20. arr3a ENSDARG00000056511, ENSDARG00000114648 192 1.735 - - - - - - - 0.768 0.967 arrestin 3a, retinal (X-arrestin) [Source:ZFIN;Acc:ZDB-GENE-040718-102]
21. saga ENSDARG00000012610 63 1.733 - - - - - - - 0.755 0.978 S-antigen; retina and pineal gland (arrestin) a [Source:ZFIN;Acc:ZDB-GENE-040426-1538]
22. gngt2a ENSDARG00000010680, ENSDARG00000110351 337 1.729 - - - - - - - 0.763 0.966 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7595]
23. gngt2b ENSDARG00000103543 132 1.709 - - - - - - - 0.768 0.941 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-091020-4]
24. si:ch211-133l5.5 si:ch211-133l5.5 123 1.704 - - - - - - - 0.768 0.936
25. TULP1 TULP1 50 1.69 - - - - - - - 0.761 0.929
26. elovl4b ENSDARG00000027495 107 1.687 - - - - - - - 0.853 0.834 ELOVL fatty acid elongase 4b [Source:ZFIN;Acc:ZDB-GENE-030131-7672]
27. muc13a ENSDARG00000069559 985 1.682 - - - - - - - 0.751 0.931 mucin 13a, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-061207-26]
28. fam46ba 4575 1.666 - - - - - - - 0.882 0.784 family with sequence similarity 46, member Ba
29. si:dkey-25o1.2 si:dkey-25o1.2 86 1.661 - - - - - - - 0.848 0.813
30. rlbp1b ENSDARG00000045808, ENSDARG00000109856 282 1.654 - - - - - - - 0.761 0.893 retinaldehyde binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1870]
31. rpe65a ENSDARG00000007480 52 1.651 - - - - 0.703 - - - 0.948 retinal pigment epithelium-specific protein 65a [Source:ZFIN;Acc:ZDB-GENE-040426-1717]
32. guk1b ENSDARG00000005776 23 1.64 - - - - 0.733 - - - 0.907 guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
33. syt5b ENSDARG00000011640 70 1.636 - - - - 0.705 - - - 0.931 synaptotagmin Vb [Source:ZFIN;Acc:ZDB-GENE-050522-134]
34. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 1.625 - - - 0.745 - - - - 0.880 multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
35. si:ch211-130m23.2 ENSDARG00000095136 121 1.624 - - - - - - - 0.749 0.875 si:ch211-130m23.2 [Source:ZFIN;Acc:ZDB-GENE-060531-13]
36. si:ch211-117m20.5 ENSDARG00000091996 7246 1.573 - - - - - - - 0.749 0.824 si:ch211-117m20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-12]
37. dhrs9 ENSDARG00000019260 250 1.547 - - - - - - - 0.714 0.833 dehydrogenase/reductase (SDR family) member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1249]
38. ppp1r3da ENSDARG00000077513 109 1.535 - - - - - - - 0.711 0.824 protein phosphatase 1, regulatory subunit 3Da [Source:ZFIN;Acc:ZDB-GENE-080204-75]
39. gfpt2 ENSDARG00000044094 2503 1.502 - - - - - - - 0.779 0.723 glutamine-fructose-6-phosphate transaminase 2 [Source:ZFIN;Acc:ZDB-GENE-071113-1]
40. her5 ENSDARG00000008796 7 1.495 - - - 0.760 0.735 - - - - hairy-related 5 [Source:ZFIN;Acc:ZDB-GENE-990415-90]
41. casp9 ENSDARG00000004325 306 1.42 - - - - - - - 0.709 0.711 caspase 9, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-5]
42. SPAG16 7 1 - - - 1.000 - - - - - sperm associated antigen 16
43. lactbl1a ENSDARG00000089063, ENSDARG00000114144, ENSDARG00000116950 0 1 - - - 1.000 - - - - - lactamase, beta-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7625]
44. paqr7a ENSDARG00000100462 15 1 - - - 1.000 - - - - - progestin and adipoQ receptor family member VII, a [Source:ZFIN;Acc:ZDB-GENE-070705-346]
45. SLC22A7_1 SLC22A7_1 2 1 - - - 1.000 - - - - -
46. si:dkey-14d8.2 38 1 - - - - 1.000 - - - - si:dkey-14d8.2
47. si:dkey-233e3.4 si:dkey-233e3.4 3 1 - - - 1.000 - - - - -
48. si:dkey-237j11.3 ENSDARG00000094303 1 1 - - - 1.000 - - - - - si:dkey-237j11.3 [Source:ZFIN;Acc:ZDB-GENE-100922-239]
49. si:dkey-283b1.7 ENSDARG00000053460 10 1 - - - 1.000 - - - - - si:dkey-283b1.7 [Source:ZFIN;Acc:ZDB-GENE-120215-126]
50. pdk3a ENSDARG00000014527 15 1 - - - 1.000 - - - - - pyruvate dehydrogenase kinase, isozyme 3a [Source:ZFIN;Acc:ZDB-GENE-061220-3]
51. BX323793.4 BX323793.4 8 1 - - - 1.000 - - - - -
52. si:ch211-208f21.2 ENSDARG00000094177 61 1 - - - 1.000 - - - - - si:ch211-208f21.2 [Source:ZFIN;Acc:ZDB-GENE-110914-134]
53. zte38 ENSDARG00000037056 0 1 - - - 1.000 - - - - - zebrafish testis-expressed 38 [Source:ZFIN;Acc:ZDB-GENE-060312-39]
54. BX470254.1_1 ENSDARG00000097402 50 1 - - - 1.000 - - - - -
55. bmp3 ENSDARG00000060526, ENSDARG00000109238 54 1 - - - - 1.000 - - - - bone morphogenetic protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7192]
56. PGBD1 PGBD1 61 1 - - - 1.000 - - - - -
57. RIC3 ENSDARG00000105549 3 1 - - - 1.000 - - - - - RIC3 acetylcholine receptor chaperone [Source:HGNC Symbol;Acc:HGNC:30338]
58. si:rp71-36a1.5 ENSDARG00000077252, ENSDARG00000090882 2 1 - - - 1.000 - - - - - si:rp71-36a1.5 [Source:ZFIN;Acc:ZDB-GENE-091204-428]
59. si:ch211-245j22.3 ENSDARG00000041379, ENSDARG00000110219, ENSDARG00000110924 3 1 - - - 1.000 - - - - - si:ch211-245j22.3 [Source:ZFIN;Acc:ZDB-GENE-050419-38]
60. CUL9 2 1 - - - - 1.000 - - - - cullin 9
61. CR853287.1 CR853287.1 6 1 - - - 1.000 - - - - -
62. CABZ01064973.2 CABZ01064973.2 0 1 - - - 1.000 - - - - -
63. cldn17 ENSDARG00000099950 14 1 - - - 1.000 - - - - - claudin 17 [Source:ZFIN;Acc:ZDB-GENE-070821-2]
64. kcnh1a ENSDARG00000024167 9 1 - - - - 1.000 - - - - potassium voltage-gated channel, subfamily H (eag-related), member 1a [Source:ZFIN;Acc:ZDB-GENE-061226-1]
65. si:dkey-58f10.4 ENSDARG00000094820 3 1 - - - 1.000 - - - - - si:dkey-58f10.4 [Source:ZFIN;Acc:ZDB-GENE-060526-318]
66. si:dkey-199m13.9 si:dkey-199m13.9 20 1 - - - 1.000 - - - - -
67. si:ch73-176g19.2 si:ch73-176g19.2 2 1 - - - 1.000 - - - - -
68. NINL ENSDARG00000098414 0 1 - - - 1.000 - - - - - ninein-like [Source:ZFIN;Acc:ZDB-GENE-130530-768]
69. zgc:114037_3 17 1 - - - 1.000 - - - - - zgc:114037
70. APOD_1 APOD_1 7 1 - - - 1.000 - - - - -
71. ANO2 ENSDARG00000101363 1 1 - - - 1.000 - - - - - anoctamin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-62]
72. zgc:114037_1 10 1 - - - 1.000 - - - - - zgc:114037
73. COPS6 5 1 - - - 1.000 - - - - - COP9 signalosome subunit 6
74. zgc:112234_5 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 6 1 - - - 1.000 - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
75. zdhhc18b ENSDARG00000105034 1 1 - - - 1.000 - - - - - zinc finger, DHHC-type containing 18b [Source:ZFIN;Acc:ZDB-GENE-030131-6315]
76. CU550716.4 CU550716.4 14 1 - - - 1.000 - - - - -
77. mag ENSDARG00000104023 7 1 - - - 1.000 - - - - - myelin associated glycoprotein [Source:ZFIN;Acc:ZDB-GENE-041217-24]
78. si:ch211-168h21.3 10 1 - - - - 1.000 - - - - si:ch211-168h21.3
79. CR774179.1 ENSDARG00000086969 3 1 - - - 1.000 - - - - -
80. AC024175.21 AC024175.21 10 1 - - - 1.000 - - - - -
81. si:dkey-29b11.3 ENSDARG00000087388 29 1 - - - 1.000 - - - - - si:dkey-29b11.3 [Source:ZFIN;Acc:ZDB-GENE-100922-178]
82. pyya ENSDARG00000053449 134 1 - - - - 1.000 - - - - peptide YYa [Source:ZFIN;Acc:ZDB-GENE-980526-71]
83. si:ch211-244h4.1 si:ch211-244h4.1 1 1 - - - 1.000 - - - - -
84. Metazoa_SRP_15 Metazoa_SRP_15 2 1 - - - 1.000 - - - - -
85. CR855273.1 CR855273.1 2 1 - - - 1.000 - - - - -
86. NRP2 NRP2 5 1 - - - 1.000 - - - - -
87. CMKLR1_1 CMKLR1_1 2 1 - - - 1.000 - - - - -
88. CT583679.2 CT583679.2 10 1 - - - 1.000 - - - - -
89. zgc:153681 ENSDARG00000086017 0 1 - - - 1.000 - - - - - zgc:153681 [Source:ZFIN;Acc:ZDB-GENE-060825-299]
90. arrb2a ENSDARG00000039215 5 1 - - - 1.000 - - - - - arrestin, beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-29]
91. pcdh15b ENSDARG00000008127 2 1 - - - 1.000 - - - - - protocadherin-related 15b [Source:ZFIN;Acc:ZDB-GENE-050214-1]
92. si:zfos-754c12.2 ENSDARG00000089747 0 1 - - - 1.000 - - - - - si:zfos-754c12.2 [Source:ZFIN;Acc:ZDB-GENE-130531-27]
93. mfsd2aa ENSDARG00000030630 66 1 - - - - 1.000 - - - - major facilitator superfamily domain containing 2aa [Source:ZFIN;Acc:ZDB-GENE-041114-166]
94. si:dkey-26i24.1 ENSDARG00000102673 4 1 - - - - 1.000 - - - - si:dkey-26i24.1 [Source:ZFIN;Acc:ZDB-GENE-110913-88]
95. RD3L RD3L 15 1 - - - 1.000 - - - - -
96. Metazoa_SRP_10 Metazoa_SRP_10 5 1 - - - - 1.000 - - - -
97. si:ch211-234c11.3 ENSDARG00000093615 1 1 - - - 1.000 - - - - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
98. si:ch211-133l5.4 ENSDARG00000092533 5 1 - - - 1.000 - - - - - si:ch211-133l5.4 [Source:ZFIN;Acc:ZDB-GENE-081104-114]
99. lratb 3 1 - - - - 1.000 - - - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
100. pcsk9 ENSDARG00000074185 8 1 - - - 1.000 - - - - - proprotein convertase subtilisin/kexin type 9 [Source:ZFIN;Acc:ZDB-GENE-060927-1]

There are 544 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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