Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for opa1

Gene Name Gene ID Reads Annotation
opa1 ENSDARG00000070801 57 optic atrophy 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-041114-7]










Genes with expression patterns similar to opa1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. opa1 ENSDARG00000070801 57 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 optic atrophy 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-041114-7]
2. zgc:153896 ENSDARG00000003977 142 2.412 - 0.915 0.746 - - 0.751 - - - zgc:153896 [Source:ZFIN;Acc:ZDB-GENE-060825-119]
3. ANO7 ANO7 54 1.803 1.000 - - - - 0.803 - - -
4. pvalb5 ENSDARG00000032836 242 1.772 1.000 - - - - - 0.772 - - parvalbumin 5 [Source:ZFIN;Acc:ZDB-GENE-050417-336]
5. LRFN4 LRFN4 59 1.741 1.000 - - - - - 0.741 - -
6. si:ch211-168h21.3 10 1.728 1.000 - - - - - - 0.728 - si:ch211-168h21.3
7. slc15a4 ENSDARG00000102612 1096 1.717 1.000 - 0.717 - - - - - - solute carrier family 15 (oligopeptide transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1047]
8. bard1 ENSDARG00000076733 40 1.652 - 0.824 - - - 0.828 - - - BRCA1 associated RING domain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5883]
9. caspa ENSDARG00000008165 286 1.645 - 0.829 0.816 - - - - - - caspase a [Source:ZFIN;Acc:ZDB-GENE-000616-3]
10. si:ch211-113e8.9 ENSDARG00000095065 33 1.637 0.919 - - - - - - 0.718 - si:ch211-113e8.9 [Source:ZFIN;Acc:ZDB-GENE-090313-14]
11. fam175b fam175b 37 1.633 - - 0.910 - - - 0.723 - -
12. si:dkey-149i8.3 si:dkey-149i8.3 9 1.633 - 0.865 - - - 0.768 - - -
13. cdc42l2 ENSDARG00000057869, ENSDARG00000109454 181 1.629 - 0.870 - - - 0.759 - - - cell division cycle 42 like 2 [Source:ZFIN;Acc:ZDB-GENE-060312-21]
14. rce1a ENSDARG00000077909 4 1.626 0.732 - - - - - - - 0.894 Ras converting CAAX endopeptidase 1a [Source:ZFIN;Acc:ZDB-GENE-041008-116]
15. si:dkey-93m18.3 ENSDARG00000092664 30 1.624 - - 0.896 - - - - 0.728 - si:dkey-93m18.3 [Source:ZFIN;Acc:ZDB-GENE-091204-346]
16. MCC ENSDARG00000105237 4 1.593 - 0.865 - - - - - 0.728 - MCC, WNT signaling pathway regulator [Source:ZFIN;Acc:ZDB-GENE-141210-1]
17. MPPED1 ENSDARG00000088181 117 1.569 - 0.801 - - - 0.768 - - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
18. ebpl ENSDARG00000036636 79 1.565 - 0.852 - - - 0.713 - - - EBP like [Source:ZFIN;Acc:ZDB-GENE-030616-542]
19. BX324215.2 BX324215.2 2 1.559 - - - - - 0.768 0.791 - -
20. IQUB ENSDARG00000061899 91 1.543 - - 0.835 - - 0.708 - - - IQ motif and ubiquitin domain containing [Source:ZFIN;Acc:ZDB-GENE-110421-1]
21. snx33 ENSDARG00000014954 45 1.54 - 0.768 - - - - 0.772 - - sorting nexin 33 [Source:ZFIN;Acc:ZDB-GENE-041111-209]
22. gpr155a ENSDARG00000090804 27 1.54 - - - - - 0.768 0.772 - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
23. runx3 ENSDARG00000052826 247 1.522 - - 0.740 - - - 0.782 - - runt-related transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-000605-2]
24. vrk2 ENSDARG00000021547 45 1.518 0.796 - - - - 0.722 - - - vaccinia related kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1046]
25. zgc:85910 zgc:85910 299 1.431 0.711 0.720 - - - - - - -
26. C1S_1 C1S_1 11 1 1.000 - - - - - - - -
27. si:dkey-163m14.5 si:dkey-163m14.5 1 1 1.000 - - - - - - - -
28. si:ch211-260b17.6 32 1 1.000 - - - - - - - - si:ch211-260b17.6
29. gper gper 4 1 1.000 - - - - - - - -
30. ptpn20 ENSDARG00000075459 1 1 1.000 - - - - - - - - protein tyrosine phosphatase, non-receptor type 20 [Source:ZFIN;Acc:ZDB-GENE-090313-90]
31. nkiras2_1 ENSDARG00000052594 31 1 1.000 - - - - - - - - NFKB inhibitor interacting Ras-like 2 [Source:ZFIN;Acc:ZDB-GENE-040801-166]
32. si:dkey-78i1.2 si:dkey-78i1.2 15 1 1.000 - - - - - - - -
33. ZNF135_3 ZNF135_3 1 1 1.000 - - - - - - - -
34. lpar5b ENSDARG00000068638 2 1 1.000 - - - - - - - - lysophosphatidic acid receptor 5b [Source:ZFIN;Acc:ZDB-GENE-081022-116]
35. rhoga ENSDARG00000068653 13 1 1.000 - - - - - - - - ras homolog family member Ga [Source:ZFIN;Acc:ZDB-GENE-060503-820]
36. sntb1 ENSDARG00000041729 163 1 1.000 - - - - - - - - syntrophin, basic 1 [Source:ZFIN;Acc:ZDB-GENE-040704-13]
37. AL935293.1 AL935293.1 2 1 1.000 - - - - - - - -
38. ZNF407 ENSDARG00000087536 6 1 1.000 - - - - - - - - zinc finger protein 407 [Source:ZFIN;Acc:ZDB-GENE-110411-123]
39. CDHR5 CDHR5 2 1 1.000 - - - - - - - -
40. CR847906.1 ENSDARG00000099493 88 1 1.000 - - - - - - - - protein NLRC3-like [Source:NCBI gene;Acc:571651]
41. CABZ01072037.1 CABZ01072037.1 2 1 1.000 - - - - - - - -
42. b3gntl1 ENSDARG00000043431 50 1 1.000 - - - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050913-133]
43. cep68 ENSDARG00000039411 30 1 1.000 - - - - - - - - centrosomal protein 68 [Source:ZFIN;Acc:ZDB-GENE-030616-565]
44. htr6 ENSDARG00000016095 9 1 1.000 - - - - - - - - 5-hydroxytryptamine (serotonin) receptor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7839]
45. si:ch211-150j10.4 ENSDARG00000079336 23 1 1.000 - - - - - - - - si:ch211-150j10.4 [Source:ZFIN;Acc:ZDB-GENE-110411-215]
46. abcg1 ENSDARG00000063475 97 1 1.000 - - - - - - - - ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
47. CU183952.1 CU183952.1 32 1 1.000 - - - - - - - -
48. mab21l3 ENSDARG00000076013, ENSDARG00000112160 35 1 1.000 - - - - - - - - mab-21-like 3 [Source:ZFIN;Acc:ZDB-GENE-070912-242]
49. fabp10a ENSDARG00000038439 4 1 1.000 - - - - - - - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
50. DUSP13_1 DUSP13_1 425 1 1.000 - - - - - - - -
51. tecta ENSDARG00000059558 15 1 1.000 - - - - - - - - tectorin alpha [Source:ZFIN;Acc:ZDB-GENE-110411-120]
52. si:dkeyp-46h3.8 ENSDARG00000093704 9 1 1.000 - - - - - - - - si:dkeyp-46h3.8 [Source:ZFIN;Acc:ZDB-GENE-060503-183]
53. SYTL2 SYTL2 139 1 1.000 - - - - - - - -
54. si:ch73-127m5.3 si:ch73-127m5.3 1 1 1.000 - - - - - - - -
55. rsad1 ENSDARG00000077698, ENSDARG00000112179 93 1 1.000 - - - - - - - - radical S-adenosyl methionine domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2508]
56. CCDC37 CCDC37 10 1 1.000 - - - - - - - -
57. CABZ01090975.1 CABZ01090975.1 9 1 1.000 - - - - - - - -
58. cx28.8 ENSDARG00000071042 62 1 1.000 - - - - - - - - connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
59. znhit3 ENSDARG00000023950 61 1 1.000 - - - - - - - - zinc finger, HIT-type containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1114]
60. ctrl ENSDARG00000068680 18 1 1.000 - - - - - - - - chymotrypsin-like [Source:ZFIN;Acc:ZDB-GENE-040912-147]
61. oxtrl ENSDARG00000044175 10 1 1.000 - - - - - - - - oxytocin receptor like [Source:ZFIN;Acc:ZDB-GENE-110805-1]
62. arhgap15 ENSDARG00000062349 28 1 1.000 - - - - - - - - Rho GTPase activating protein 15 [Source:ZFIN;Acc:ZDB-GENE-070912-314]
63. matn3a ENSDARG00000069245 2410 1 1.000 - - - - - - - - matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]
64. si:dkey-54f18.2 si:dkey-54f18.2 27 1 1.000 - - - - - - - -
65. RNF214_1 RNF214_1 5 1 1.000 - - - - - - - -
66. si:dkey-61p9.11 ENSDARG00000096762, ENSDARG00000110448 2 1 1.000 - - - - - - - - si:dkey-61p9.11 [Source:ZFIN;Acc:ZDB-GENE-041210-242]
67. BX511182.1 BX511182.1 8 1 1.000 - - - - - - - -
68. si:ch211-142k18.1 1 1 1.000 - - - - - - - - si:ch211-142k18.1
69. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1 1.000 - - - - - - - - sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
70. dnm2a ENSDARG00000069937 32 1 1.000 - - - - - - - - dynamin 2a [Source:ZFIN;Acc:ZDB-GENE-050913-84]
71. BX004994.2 BX004994.2 17 1 1.000 - - - - - - - -
72. ccdc129 37 1 1.000 - - - - - - - - coiled-coil domain containing 129, transcript variant X2
73. gria1b ENSDARG00000032714, ENSDARG00000111658 12 1 1.000 - - - - - - - - glutamate receptor, ionotropic, AMPA 1b [Source:ZFIN;Acc:ZDB-GENE-020125-2]
74. Metazoa_SRP_29 Metazoa_SRP_29 1 1 1.000 - - - - - - - -
75. zdhhc2 ENSDARG00000034757, ENSDARG00000110118 28 1 1.000 - - - - - - - - zinc finger, DHHC-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-58]
76. KRT18_1 KRT18_1 17 1 1.000 - - - - - - - -
77. SLC35A3_1 SLC35A3_1 35 1 1.000 - - - - - - - -
78. p4ha1a ENSDARG00000033537, ENSDARG00000114754 38 1 1.000 - - - - - - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
79. zgc:153441 ENSDARG00000054797 9 1 1.000 - - - - - - - - zgc:153441 [Source:ZFIN;Acc:ZDB-GENE-060825-39]
80. tmprss13a ENSDARG00000100969 84 1 1.000 - - - - - - - - transmembrane serine protease 13a [Source:ZFIN;Acc:ZDB-GENE-090309-3]
81. BX897671.1 BX897671.1 10 1 1.000 - - - - - - - -
82. si:ch73-189n23.1 ENSDARG00000086247 15 1 1.000 - - - - - - - - si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217]
83. CABZ01046432.1 ENSDARG00000079325 11 1 1.000 - - - - - - - - uncharacterized LOC100331045 [Source:NCBI gene;Acc:100331045]
84. BX897714.3 BX897714.3 3 1 1.000 - - - - - - - -
85. si:ch211-202n12.5 si:ch211-202n12.5 19 1 1.000 - - - - - - - -
86. grapb ENSDARG00000022668 6 1 1.000 - - - - - - - - GRB2 related adaptor protein b [Source:ZFIN;Acc:ZDB-GENE-050913-4]
87. ZBTB42 ENSDARG00000102761 2 1 1.000 - - - - - - - - zinc finger and BTB domain containing 42 [Source:ZFIN;Acc:ZDB-GENE-130730-2]
88. GPR137B_1 GPR137B_1 8 1 1.000 - - - - - - - -
89. si:ch211-195i24.1 si:ch211-195i24.1 10 1 1.000 - - - - - - - -
90. tceb3 40 1 1.000 - - - - - - - - transcription elongation factor B (SIII), polypeptide 3
91. GLIPR1 GLIPR1 37 1 1.000 - - - - - - - -
92. si:dkey-179o14.4 si:dkey-179o14.4 2 1 1.000 - - - - - - - -
93. CABZ01072557.1 CABZ01072557.1 9 1 1.000 - - - - - - - -
94. gadd45aa ENSDARG00000043581 114 1 1.000 - - - - - - - - growth arrest and DNA-damage-inducible, alpha, a [Source:ZFIN;Acc:ZDB-GENE-040426-1501]
95. echdc1 68 1 1.000 - - - - - - - - enoyl CoA hydratase domain containing 1, transcript variant 1
96. cep41 ENSDARG00000038500, ENSDARG00000117114 4 1 1.000 - - - - - - - - centrosomal protein 41 [Source:ZFIN;Acc:ZDB-GENE-040704-35]
97. SLC9A3R2_1 SLC9A3R2_1 28 1 1.000 - - - - - - - -
98. rictora ENSDARG00000100867 20 1 1.000 - - - - - - - - RPTOR independent companion of MTOR, complex 2 a [Source:ZFIN;Acc:ZDB-GENE-060526-49]
99. lgi1b ENSDARG00000058421 12 1 1.000 - - - - - - - - leucine-rich, glioma inactivated 1b [Source:ZFIN;Acc:ZDB-GENE-060217-1]
100. ptpn6_1 ENSDARG00000089043 22 1 1.000 - - - - - - - - protein tyrosine phosphatase, non-receptor type 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7513]

There are 1029 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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