Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nubp1

Gene Name Gene ID Reads Annotation
nubp1 ENSDARG00000055472 1182 nucleotide binding protein 1 (MinD homolog, E. coli) [Source:ZFIN;Acc:ZDB-GENE-050417-471]










Genes with expression patterns similar to nubp1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nubp1 ENSDARG00000055472 1182 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nucleotide binding protein 1 (MinD homolog, E. coli) [Source:ZFIN;Acc:ZDB-GENE-050417-471]
2. fhdc1 ENSDARG00000074812 934 1.774 - 0.989 - - - - - 0.785 - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
3. ubqln4 ENSDARG00000052975 6453 1.593 - 0.881 - - - - 0.712 - - ubiquilin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6269]
4. si:ch211-148l7.4 ENSDARG00000094469 221 1.498 0.761 - - - - - - 0.737 - si:ch211-148l7.4 [Source:ZFIN;Acc:ZDB-GENE-090313-38]
5. ppfibp2b ENSDARG00000029168 961 0.999 - 0.999 - - - - - - - PTPRF interacting protein, binding protein 2b (liprin beta 2) [Source:ZFIN;Acc:ZDB-GENE-040718-54]
6. MTMR11 ENSDARG00000069755 917 0.999 - 0.999 - - - - - - - myotubularin related protein 11 [Source:ZFIN;Acc:ZDB-GENE-130530-726]
7. ahsa1l ahsa1l 2366 0.999 - 0.999 - - - - - - -
8. esrrga ENSDARG00000004861 805 0.998 - 0.998 - - - - - - - estrogen-related receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-030821-2]
9. ube2f ENSDARG00000025754 1946 0.998 - 0.998 - - - - - - - ubiquitin-conjugating enzyme E2F (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2557]
10. CABZ01079490.1 CABZ01079490.1 1808 0.998 - 0.998 - - - - - - -
11. shda ENSDARG00000094243 929 0.998 - 0.998 - - - - - - - Src homology 2 domain containing transforming protein D, a [Source:ZFIN;Acc:ZDB-GENE-070912-58]
12. dyrk1ab ENSDARG00000023814 1769 0.998 - 0.998 - - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
13. mrpl14 ENSDARG00000068886 1991 0.998 - 0.998 - - - - - - - mitochondrial ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-040426-1066]
14. ddx42 ENSDARG00000037928 1659 0.998 - 0.998 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
15. suv39h1b ENSDARG00000055753 1540 0.998 - 0.998 - - - - - - - suppressor of variegation 3-9 homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5105]
16. eya2 ENSDARG00000018984 1768 0.998 - 0.998 - - - - - - - EYA transcriptional coactivator and phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-24]
17. ccsapb ENSDARG00000040085 784 0.998 - 0.998 - - - - - - - centriole, cilia and spindle-associated protein b [Source:ZFIN;Acc:ZDB-GENE-081107-51]
18. cks1b ENSDARG00000007971 2739 0.998 - 0.998 - - - - - - - CDC28 protein kinase regulatory subunit 1B [Source:ZFIN;Acc:ZDB-GENE-040801-112]
19. nkain1 ENSDARG00000006859 1961 0.998 - 0.998 - - - - - - - sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
20. sema4ba ENSDARG00000074414 1194 0.998 - 0.998 - - - - - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ba [Source:ZFIN;Acc:ZDB-GENE-070705-31]
21. tlk2 ENSDARG00000010779, ENSDARG00000112127 751 0.998 - 0.998 - - - - - - - tousled-like kinase 2 [Source:ZFIN;Acc:ZDB-GENE-060623-36]
22. ccnc ENSDARG00000009607 1240 0.998 - 0.998 - - - - - - - cyclin C [Source:ZFIN;Acc:ZDB-GENE-030131-7369]
23. zbtb44 ENSDARG00000061110, ENSDARG00000116194 1106 0.998 - 0.998 - - - - - - - zinc finger and BTB domain containing 44 [Source:ZFIN;Acc:ZDB-GENE-060526-201]
24. wu:fb54a03 wu:fb54a03 1722 0.998 - 0.998 - - - - - - -
25. cnksr2b ENSDARG00000073707 664 0.998 - 0.998 - - - - - - - connector enhancer of kinase suppressor of Ras 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8048]
26. CAPN1_1 ENSDARG00000055338 288 0.998 - 0.998 - - - - - - - calpain 1 [Source:HGNC Symbol;Acc:HGNC:1476]
27. prune2 ENSDARG00000059423, ENSDARG00000116519 646 0.998 - 0.998 - - - - - - - prune homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050309-222]
28. angptl3 ENSDARG00000044365 574 0.998 - 0.998 - - - - - - - angiopoietin-like 3 [Source:ZFIN;Acc:ZDB-GENE-010817-3]
29. ctage5 530 0.998 - 0.998 - - - - - - - CTAGE family, member 5, transcript variant X8
30. zgc:111974 zgc:111974 1386 0.998 - 0.998 - - - - - - -
31. gfap ENSDARG00000025301 5584 0.998 - 0.998 - - - - - - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
32. trnau1apa ENSDARG00000101323 911 0.998 - 0.998 - - - - - - - tRNA selenocysteine 1 associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-502]
33. thbs4a ENSDARG00000102777 625 0.998 - 0.998 - - - - - - - thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
34. olig4 ENSDARG00000052610, ENSDARG00000116678 1704 0.998 - 0.998 - - - - - - - oligodendrocyte transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3580]
35. wu:fi42e03 ENSDARG00000070709 276 0.998 - 0.998 - - - - - - - wu:fi42e03 [Source:ZFIN;Acc:ZDB-GENE-030131-6284]
36. aldh3a2b ENSDARG00000029381 2187 0.998 - 0.998 - - - - - - - aldehyde dehydrogenase 3 family, member A2b [Source:ZFIN;Acc:ZDB-GENE-040912-103]
37. STARD4 ENSDARG00000102477 411 0.998 - 0.998 - - - - - - - StAR-related lipid transfer (START) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-168]
38. prosc 925 0.998 - 0.998 - - - - - - - pyridoxal phosphate binding protein, transcript variant X1
39. WDR81 ENSDARG00000079702 822 0.998 - 0.998 - - - - - - - WD repeat domain 81 [Source:ZFIN;Acc:ZDB-GENE-030131-3389]
40. xylt1 ENSDARG00000061248 2357 0.998 - 0.998 - - - - - - - xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
41. si:ch211-93f2.1 ENSDARG00000101726, ENSDARG00000104818 708 0.998 - 0.998 - - - - - - - si:ch211-93f2.1 [Source:ZFIN;Acc:ZDB-GENE-041014-96]
42. SYTL1 ENSDARG00000070094 282 0.998 - 0.998 - - - - - - - synaptotagmin-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-439]
43. rbm14b ENSDARG00000103834 1597 0.997 - 0.997 - - - - - - - RNA binding motif protein 14b [Source:ZFIN;Acc:ZDB-GENE-040426-2455]
44. kpna5 ENSDARG00000042030 1643 0.997 - 0.997 - - - - - - - karyopherin alpha 5 (importin alpha 6) [Source:ZFIN;Acc:ZDB-GENE-050522-22]
45. snx27b ENSDARG00000016977 2768 0.997 - 0.997 - - - - - - - sorting nexin family member 27b [Source:ZFIN;Acc:ZDB-GENE-040426-1529]
46. samm50l ENSDARG00000039681 2465 0.997 - 0.997 - - - - - - - sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
47. setbp1 ENSDARG00000093799 4499 0.997 - 0.997 - - - - - - - SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
48. phldb1a ENSDARG00000061093 1637 0.997 - 0.997 - - - - - - - pleckstrin homology-like domain, family B, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-272]
49. PPIC ENSDARG00000104343 662 0.997 - 0.997 - - - - - - - peptidylprolyl isomerase C [Source:ZFIN;Acc:ZDB-GENE-170217-1]
50. galns ENSDARG00000051853, ENSDARG00000113387 347 0.997 - 0.997 - - - - - - - galactosamine (N-acetyl)-6-sulfatase [Source:ZFIN;Acc:ZDB-GENE-070112-1152]
51. gpd1c ENSDARG00000036942 869 0.997 - 0.997 - - - - - - - glycerol-3-phosphate dehydrogenase 1c [Source:ZFIN;Acc:ZDB-GENE-040426-2576]
52. kctd6b ENSDARG00000023703, ENSDARG00000116734 2621 0.997 - 0.997 - - - - - - - potassium channel tetramerization domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-040718-14]
53. acsbg1 ENSDARG00000062077 2020 0.996 - 0.996 - - - - - - - acyl-CoA synthetase bubblegum family member 1 [Source:ZFIN;Acc:ZDB-GENE-110914-219]
54. emc3 ENSDARG00000020607 3406 0.996 - 0.996 - - - - - - - ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
55. bmpr1bb ENSDARG00000102742 1036 0.996 - 0.996 - - - - - - - bone morphogenetic protein receptor, type IBb [Source:ZFIN;Acc:ZDB-GENE-090610-1]
56. smox ENSDARG00000036967 3816 0.996 - 0.996 - - - - - - - spermine oxidase [Source:ZFIN;Acc:ZDB-GENE-031201-3]
57. zc3h14 ENSDARG00000041402, ENSDARG00000109544 2477 0.996 - 0.996 - - - - - - - zinc finger CCCH-type containing 14 [Source:ZFIN;Acc:ZDB-GENE-041014-257]
58. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 0.996 - 0.996 - - - - - - - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
59. sema3ab ENSDARG00000042210, ENSDARG00000110306 2178 0.996 - 0.996 - - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab [Source:ZFIN;Acc:ZDB-GENE-991209-6]
60. psmd11a ENSDARG00000060150 4529 0.996 - 0.996 - - - - - - - proteasome 26S subunit, non-ATPase 11a [Source:ZFIN;Acc:ZDB-GENE-030131-2711]
61. ponzr5 ENSDARG00000055046, ENSDARG00000115684 1093 0.995 - 0.995 - - - - - - - plac8 onzin related protein 5 [Source:ZFIN;Acc:ZDB-GENE-081104-325]
62. matr3l1.1 ENSDARG00000000394, ENSDARG00000001162 3757 0.995 - 0.995 - - - - - - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
63. tra2b ENSDARG00000002168 3218 0.995 - 0.995 - - - - - - - transformer 2 beta homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1094]
64. tes ENSDARG00000051857 2020 0.995 - 0.995 - - - - - - - testis derived transcript (3 LIM domains) [Source:ZFIN;Acc:ZDB-GENE-040718-59]
65. prss12 ENSDARG00000061830 593 0.995 - 0.995 - - - - - - - serine protease 12 [Source:ZFIN;Acc:ZDB-GENE-090313-45]
66. pdcd5 ENSDARG00000026072 3135 0.995 - 0.995 - - - - - - - programmed cell death 5 [Source:ZFIN;Acc:ZDB-GENE-040426-980]
67. zgc:100829 ENSDARG00000015557 1686 0.995 - 0.995 - - - - - - - zgc:100829 [Source:ZFIN;Acc:ZDB-GENE-040801-54]
68. rapgef2 ENSDARG00000005482 2586 0.995 - 0.995 - - - - - - - Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
69. zgc:86598 ENSDARG00000014222 3664 0.994 - 0.994 - - - - - - - zgc:86598 [Source:ZFIN;Acc:ZDB-GENE-040625-181]
70. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 0.994 - 0.994 - - - - - - - TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
71. cdk8 ENSDARG00000016496, ENSDARG00000110333 3087 0.994 - 0.994 - - - - - - - cyclin-dependent kinase 8 [Source:ZFIN;Acc:ZDB-GENE-030903-2]
72. sfxn2 ENSDARG00000017960, ENSDARG00000111267 3869 0.994 - 0.994 - - - - - - - sideroflexin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2831]
73. crabp1b ENSDARG00000035904 2753 0.993 - 0.993 - - - - - - - cellular retinoic acid binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040624-3]
74. ghra ENSDARG00000054771, ENSDARG00000112689 2883 0.993 - 0.993 - - - - - - - growth hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-070509-1]
75. rsu1 ENSDARG00000102885 3604 0.993 - 0.993 - - - - - - - Ras suppressor protein 1 [Source:ZFIN;Acc:ZDB-GENE-030616-518]
76. sar1ab ENSDARG00000033320 3984 0.993 - 0.993 - - - - - - - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
77. ldha ENSDARG00000101251 10868 0.993 - 0.993 - - - - - - - lactate dehydrogenase A4 [Source:ZFIN;Acc:ZDB-GENE-991026-5]
78. tmpoa ENSDARG00000007315 3638 0.992 - 0.992 - - - - - - - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
79. TCIRG1 TCIRG1 875 0.992 - 0.992 - - - - - - -
80. clpxb ENSDARG00000067796 1918 0.992 - 0.992 - - - - - - - caseinolytic mitochondrial matrix peptidase chaperone subunit b [Source:ZFIN;Acc:ZDB-GENE-130404-1]
81. hhatlb ENSDARG00000005139 6674 0.992 - 0.992 - - - - - - - hedgehog acyltransferase like, b [Source:ZFIN;Acc:ZDB-GENE-050506-130]
82. atf6 ENSDARG00000012656 3873 0.992 - 0.992 - - - - - - - activating transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-041014-328]
83. ndrg2 ENSDARG00000011170 11442 0.991 - 0.991 - - - - - - - NDRG family member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-15]
84. whsc1l1 8544 0.991 - 0.991 - - - - - - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
85. pim1 ENSDARG00000100020 7035 0.991 - 0.991 - - - - - - - Pim-1 proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-061013-139]
86. si:ch73-375g18.1 ENSDARG00000075024 2431 0.991 - 0.991 - - - - - - - si:ch73-375g18.1 [Source:ZFIN;Acc:ZDB-GENE-110408-56]
87. met ENSDARG00000070903 2088 0.99 - 0.990 - - - - - - - MET proto-oncogene, receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-041014-1]
88. hig1 hig1 2493 0.99 - 0.990 - - - - - - -
89. mat2b ENSDARG00000012932 3146 0.989 - 0.989 - - - - - - - methionine adenosyltransferase II, beta [Source:ZFIN;Acc:ZDB-GENE-030131-786]
90. CPEB4 CPEB4 3249 0.989 - 0.989 - - - - - - -
91. psma3 ENSDARG00000086618 6200 0.989 - 0.989 - - - - - - - proteasome subunit alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050913-120]
92. smarce1 ENSDARG00000016871 9628 0.988 - 0.988 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
93. fam83h fam83h 1448 0.988 - 0.988 - - - - - - -
94. top2a ENSDARG00000024488 4273 0.988 - 0.988 - - - - - - - DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
95. ezrb ENSDARG00000025091 2861 0.987 - 0.987 - - - - - - - ezrin b [Source:ZFIN;Acc:ZDB-GENE-050803-1]
96. fgfr2 ENSDARG00000058115 6743 0.986 - 0.986 - - - - - - - fibroblast growth factor receptor 2 [Source:ZFIN;Acc:ZDB-GENE-030323-1]
97. si:ch73-110p20.1 5932 0.985 - 0.985 - - - - - - - si:ch73-110p20.1
98. mid1ip1l ENSDARG00000018145 2789 0.984 - 0.984 - - - - - - - MID1 interacting protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-1697]
99. gsk3b ENSDARG00000017803 3438 0.982 - 0.982 - - - - - - - glycogen synthase kinase 3 beta [Source:ZFIN;Acc:ZDB-GENE-990714-4]
100. sord ENSDARG00000053405 2406 0.98 - 0.980 - - - - - - - sorbitol dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-1231]

There are 344 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA