Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nr1d2a

Gene Name Gene ID Reads Annotation
nr1d2a ENSDARG00000003820 452 nuclear receptor subfamily 1, group D, member 2a [Source:ZFIN;Acc:ZDB-GENE-040504-1]










Genes with expression patterns similar to nr1d2a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nr1d2a ENSDARG00000003820 452 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nuclear receptor subfamily 1, group D, member 2a [Source:ZFIN;Acc:ZDB-GENE-040504-1]
2. pibf1 ENSDARG00000013006, ENSDARG00000015506 151 1.769 - - - - - 0.893 - 0.876 - progesterone immunomodulatory binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-040801-94]
3. ncaldb ENSDARG00000011334 123 1.645 - - - - - 0.893 - 0.752 - neurocalcin delta b [Source:ZFIN;Acc:ZDB-GENE-040808-37]
4. wdr16 wdr16 532 1.642 - - - - 0.758 - - 0.884 -
5. pcdh1b ENSDARG00000036175 101 1.629 - - - - - 0.860 - 0.769 - protocadherin 1b [Source:ZFIN;Acc:ZDB-GENE-091015-2]
6. si:ch211-130m23.2 ENSDARG00000095136 121 1.605 - - - - 0.826 - - 0.779 - si:ch211-130m23.2 [Source:ZFIN;Acc:ZDB-GENE-060531-13]
7. dgat1a ENSDARG00000103503 63 1.594 - 0.744 - - - 0.850 - - - diacylglycerol O-acyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4600]
8. plcd3b ENSDARG00000079572 64 1.593 - 0.719 - - 0.874 - - - - phospholipase C, delta 3b [Source:ZFIN;Acc:ZDB-GENE-081222-2]
9. ISCA2 ENSDARG00000038154 489 1.562 - - - - - 0.856 0.706 - - iron-sulfur cluster assembly 2 [Source:ZFIN;Acc:ZDB-GENE-131121-486]
10. SLC25A6 ENSDARG00000005853, ENSDARG00000113366 975 1.557 - - 0.810 - - 0.747 - - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-446]
11. zgc:113452 ENSDARG00000074146 759 1.555 - 0.704 - - - 0.851 - - - zgc:113452 [Source:ZFIN;Acc:ZDB-GENE-050913-16]
12. zgc:123217 ENSDARG00000059026 292 1.545 - - - - - 0.784 - 0.761 - zgc:123217 [Source:ZFIN;Acc:ZDB-GENE-051113-188]
13. cnep1r1 ENSDARG00000036064 1440 1.538 - - - - - - 0.742 0.796 - CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050417-425]
14. fap ENSDARG00000078468 183 1.537 - 0.790 - - - 0.747 - - - fibroblast activation protein, alpha [Source:ZFIN;Acc:ZDB-GENE-081104-439]
15. CABZ01063556.1 ENSDARG00000116344 319 1.529 - - - - - 0.733 - 0.796 - L antigen family member 3 [Source:NCBI gene;Acc:100536597]
16. MAN2C1 ENSDARG00000079835 305 1.519 - 0.758 - - - 0.761 - - - mannosidase, alpha, class 2C, member 1 [Source:ZFIN;Acc:ZDB-GENE-101103-4]
17. cyp2v1 ENSDARG00000018485 694 1.51 - - - - - 0.781 - 0.729 - cytochrome P450, family 2, subfamily V, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040912-139]
18. gprc5bb ENSDARG00000075141 119 1.505 - - - - 0.724 - - 0.781 - G protein-coupled receptor, class C, group 5, member Bb [Source:ZFIN;Acc:ZDB-GENE-090313-75]
19. sla1 ENSDARG00000054340 95 1.5 - 0.720 - - - 0.780 - - - Src-like-adaptor 1 [Source:ZFIN;Acc:ZDB-GENE-050904-3]
20. si:ch211-179l5.5 si:ch211-179l5.5 249 1.492 - 0.700 - - - 0.792 - - -
21. ap1s3b ENSDARG00000027966 1064 1.481 - - - - - 0.777 - 0.704 - adaptor related protein complex 1 subunit sigma 3b [Source:ZFIN;Acc:ZDB-GENE-040912-62]
22. mtfr2 ENSDARG00000060394 482 1.479 0.748 - - - - 0.731 - - - mitochondrial fission regulator 2 [Source:ZFIN;Acc:ZDB-GENE-061013-398]
23. nfkbiab ENSDARG00000007693 1345 1.472 - - - - - 0.705 0.767 - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-1819]
24. tomm40l ENSDARG00000036721 1714 1.443 - - - - - - 0.718 0.725 - translocase of outer mitochondrial membrane 40 homolog, like [Source:ZFIN;Acc:ZDB-GENE-040426-2319]
25. FAM3D ENSDARG00000091625 1392 1.432 - - - - - 0.721 - 0.711 - family with sequence similarity 3 member D [Source:HGNC Symbol;Acc:HGNC:18665]
26. sphk2 ENSDARG00000069893 1518 0.926 - - - - - 0.926 - - - sphingosine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-100922-225]
27. LIX1 ENSDARG00000052154 9 0.917 - - - - 0.917 - - - - limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
28. rpph1 33 0.917 - - - - 0.917 - - - - ribonuclease P RNA component H1
29. ripply2 ENSDARG00000070535 18 0.917 - - - - 0.917 - - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
30. ERO1LB ERO1LB 1433 0.915 - - - - - 0.915 - - -
31. Mar-08 Mar-08 52 0.915 - - - - 0.915 - - - -
32. TPMT TPMT 138 0.915 - - - - 0.915 - - - -
33. CU467888.1 CU467888.1 30 0.914 - - - - 0.914 - - - -
34. dnaaf1 ENSDARG00000012030 58 0.914 - - - - 0.914 - - - - dynein, axonemal, assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-031114-4]
35. morn2 ENSDARG00000071360 44 0.913 - - - - 0.913 - - - - MORN repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-230]
36. BX004880.2 BX004880.2 83 0.912 - - - - 0.912 - - - -
37. CU929149.1 ENSDARG00000071554 9 0.912 - - - - 0.912 - - - -
38. alk ENSDARG00000095833 32 0.911 - - - - 0.911 - - - - ALK receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-031027-1]
39. pak1_1 ENSDARG00000103959 28 0.91 - - - - 0.910 - - - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
40. STRC ENSDARG00000105391 10 0.908 - - - - 0.908 - - - - stereocilin [Source:ZFIN;Acc:ZDB-GENE-160114-58]
41. si:dkey-51d8.6 ENSDARG00000090769 17 0.908 - - - - 0.908 - - - - si:dkey-51d8.6 [Source:ZFIN;Acc:ZDB-GENE-110914-115]
42. QSOX2 ENSDARG00000077174 26 0.907 - - - - 0.907 - - - - quiescin Q6 sulfhydryl oxidase 2 [Source:ZFIN;Acc:ZDB-GENE-110203-4]
43. lrch4 ENSDARG00000068258 24 0.907 - - - - 0.907 - - - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
44. zgc:114037_3 17 0.907 - - - - 0.907 - - - - zgc:114037
45. CU571169.4 CU571169.4 12 0.907 - - - - 0.907 - - - -
46. BX572619.4 BX572619.4 10 0.906 - - - - 0.906 - - - -
47. zgc:174938 ENSDARG00000075622 5 0.906 - - - - 0.906 - - - - zgc:174938 [Source:ZFIN;Acc:ZDB-GENE-070928-44]
48. DNAI2 DNAI2 6 0.906 - - - - 0.906 - - - -
49. CABZ01044775.1 CABZ01044775.1 5 0.906 - - - - 0.906 - - - -
50. FBF1 FBF1 13 0.906 - - - - 0.906 - - - -
51. si:ch211-131e11.14 si:ch211-131e11.14 7 0.906 - - - - 0.906 - - - -
52. MTSS1L MTSS1L 7 0.906 - - - - 0.906 - - - -
53. si:ch211-188c16.1 ENSDARG00000077288 16 0.906 - - - - 0.906 - - - - si:ch211-188c16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-162]
54. CR388152.1 CR388152.1 7 0.906 - - - - 0.906 - - - -
55. noxa1 ENSDARG00000056047, ENSDARG00000110918, ENSDARG00000112288 7 0.906 - - - - 0.906 - - - - NADPH oxidase activator 1 [Source:ZFIN;Acc:ZDB-GENE-050913-32]
56. TEKT4 ENSDARG00000028899 47 0.906 - - - - 0.906 - - - - tektin 4 [Source:ZFIN;Acc:ZDB-GENE-070410-98]
57. C20H6orf165 C20H6orf165 10 0.906 - - - - 0.906 - - - -
58. THBS1 THBS1 6 0.906 - - - - 0.906 - - - -
59. si:ch73-222f22.2 ENSDARG00000094271, ENSDARG00000095763 18 0.906 - - - - 0.906 - - - - si:ch73-222f22.2 [Source:ZFIN;Acc:ZDB-GENE-100921-20]
60. SPAG16 7 0.906 - - - - 0.906 - - - - sperm associated antigen 16
61. GJC1 GJC1 44 0.905 - - - - 0.905 - - - -
62. cxcl-c1c cxcl-c1c 159 0.904 - - - - 0.904 - - - -
63. dnah11 ENSDARG00000077384, ENSDARG00000094282 15 0.903 - - - - 0.903 - - - - dynein, axonemal, heavy chain 11 [Source:ZFIN;Acc:ZDB-GENE-100922-8]
64. WDSUB1 ENSDARG00000090418 357 0.901 - - - - 0.901 - - - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061110-97]
65. nudt22 ENSDARG00000071671 411 0.9 - - - - - 0.900 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 22 [Source:ZFIN;Acc:ZDB-GENE-041010-171]
66. chd5 ENSDARG00000105083 132 0.9 - - - - 0.900 - - - - chromodomain helicase DNA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-120314-2]
67. lims1 ENSDARG00000026985 2072 0.9 - - - - - 0.900 - - - LIM and senescent cell antigen-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-050522-236]
68. acot11b ENSDARG00000042122 235 0.899 - - - - - 0.899 - - - acyl-CoA thioesterase 11b [Source:ZFIN;Acc:ZDB-GENE-051127-37]
69. ZBTB41 ENSDARG00000054984 464 0.897 - - - - - 0.897 - - - zinc finger and BTB domain containing 41 [Source:ZFIN;Acc:ZDB-GENE-130530-649]
70. nrp2b ENSDARG00000038446 783 0.896 - - - - - 0.896 - - - neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]
71. gcnt3 ENSDARG00000060471 37 0.894 - - - - 0.894 - - - - glucosaminyl (N-acetyl) transferase 3, mucin type [Source:ZFIN;Acc:ZDB-GENE-110411-253]
72. si:ch211-59m15.1 87 0.893 - - - - - 0.893 - - - si:ch211-59m15.1
73. SNORA81 SNORA81 47 0.893 - - - - 0.893 - - - -
74. rdh5 ENSDARG00000008306 272 0.893 - - - - - 0.893 - - - retinol dehydrogenase 5 (11-cis/9-cis) [Source:ZFIN;Acc:ZDB-GENE-050208-411]
75. APOA4_2 APOA4_2 61 0.893 - - - - - 0.893 - - -
76. spg21 ENSDARG00000007760 409 0.893 - - - - - 0.893 - - - spastic paraplegia 21 (autosomal recessive, Mast syndrome) [Source:ZFIN;Acc:ZDB-GENE-040426-2722]
77. relb ENSDARG00000086173 762 0.892 - - - - - 0.892 - - - v-rel avian reticuloendotheliosis viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-030131-9531]
78. SLC35A3_1 SLC35A3_1 35 0.892 - - - - 0.892 - - - -
79. dpp4 ENSDARG00000079420 1286 0.892 - - - - - 0.892 - - - dipeptidyl-peptidase 4 [Source:ZFIN;Acc:ZDB-GENE-081104-277]
80. BX890577.2 BX890577.2 94 0.891 - - - - 0.891 - - - -
81. mmp9 ENSDARG00000042816 298 0.891 - - - - - 0.891 - - - matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2132]
82. ak7a ENSDARG00000019001 71 0.89 - - - - 0.890 - - - - adenylate kinase 7a [Source:ZFIN;Acc:ZDB-GENE-040724-122]
83. hoxb4a ENSDARG00000013533 3857 0.89 - 0.890 - - - - - - - homeobox B4a [Source:ZFIN;Acc:ZDB-GENE-990415-105]
84. kcnk1a ENSDARG00000045067 743 0.889 - - - - - 0.889 - - - potassium channel, subfamily K, member 1a [Source:ZFIN;Acc:ZDB-GENE-070620-26]
85. nog2 ENSDARG00000043066 233 0.888 - - - - 0.888 - - - - noggin 2 [Source:ZFIN;Acc:ZDB-GENE-991206-14]
86. slc15a1a ENSDARG00000100315 23 0.888 - - - - 0.888 - - - - solute carrier family 15 (oligopeptide transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-091204-9]
87. cadm1b ENSDARG00000042677 277 0.887 - - - - 0.887 - - - - cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-080327-34]
88. dak dak 139 0.886 - - - - - 0.886 - - -
89. snx15 ENSDARG00000020397, ENSDARG00000110059 491 0.886 - - - - - 0.886 - - - sorting nexin 15 [Source:ZFIN;Acc:ZDB-GENE-040426-1377]
90. ZNF648 ENSDARG00000104823 194 0.886 - - - - - 0.886 - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
91. gla ENSDARG00000036155, ENSDARG00000110713 228 0.886 - - - - - - - 0.886 - galactosidase, alpha [Source:ZFIN;Acc:ZDB-GENE-041010-207]
92. HSBP1 HSBP1 158 0.885 - - - - 0.885 - - - -
93. si:ch73-280o22.2 ENSDARG00000077072 67 0.885 - - - - - 0.885 - - - si:ch73-280o22.2 [Source:ZFIN;Acc:ZDB-GENE-141216-272]
94. NHLRC2 ENSDARG00000089581, ENSDARG00000113639 172 0.885 - - - - - - - 0.885 - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
95. gbp2 ENSDARG00000038669 91 0.885 - - - - - 0.885 - - - guanylate binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070912-618]
96. gabbr2 ENSDARG00000061042 122 0.884 - - - - 0.884 - - - - gamma-aminobutyric acid (GABA) B receptor, 2 [Source:ZFIN;Acc:ZDB-GENE-060503-620]
97. HERC4 ENSDARG00000059936 369 0.884 - - - - - - - 0.884 - HECT and RLD domain containing E3 ubiquitin protein ligase 4 [Source:ZFIN;Acc:ZDB-GENE-070801-1]
98. zbtb17 ENSDARG00000074548 661 0.884 - - - - - 0.884 - - - zinc finger and BTB domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-090313-240]
99. si:dkey-26g8.10 si:dkey-26g8.10 100 0.884 - - - - - 0.884 - - -
100. foxi3a ENSDARG00000055926 749 0.883 - - - - - 0.883 - - - forkhead box I3a [Source:ZFIN;Acc:ZDB-GENE-031126-3]

There are 1076 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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