Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nr1d1

Gene Name Gene ID Reads Annotation
nr1d1 ENSDARG00000033160 3 nuclear receptor subfamily 1, group d, member 1 [Source:ZFIN;Acc:ZDB-GENE-050105-1]










Genes with expression patterns similar to nr1d1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nr1d1 ENSDARG00000033160 3 3 - - 1.000 1.000 1.000 - - - - nuclear receptor subfamily 1, group d, member 1 [Source:ZFIN;Acc:ZDB-GENE-050105-1]
2. fip1l1a ENSDARG00000043328 7 1.782 - - 0.813 0.969 - - - - - FIP1 like 1a (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041014-8]
3. FGFBP2 FGFBP2 16 1 - - - 1.000 - - - - -
4. si:ch211-135l21.9 si:ch211-135l21.9 8 1 - - - 1.000 - - - - -
5. SNORA55 SNORA55 0 1 - - - 1.000 - - - - -
6. si:dkey-178e17.1 ENSDARG00000080000 4 1 - - - - 1.000 - - - - si:dkey-178e17.1 [Source:ZFIN;Acc:ZDB-GENE-081104-41]
7. zgc:152698 32 1 - - 1.000 - - - - - - zgc:152698
8. si:ch73-67c22.3 si:ch73-67c22.3 30 1 - - - 1.000 - - - - -
9. nr5a1a ENSDARG00000103176 12 1 - - - 1.000 - - - - - nuclear receptor subfamily 5, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-010504-1]
10. nsmfb ENSDARG00000101234 4 1 - - - 1.000 - - - - - NMDA receptor synaptonuclear signaling and neuronal migration factor b [Source:ZFIN;Acc:ZDB-GENE-080603-4]
11. or110-2 ENSDARG00000091172 1 1 - - 1.000 - - - - - - odorant receptor, family D, subfamily 110, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-76]
12. CABZ01112401.1 CABZ01112401.1 0 1 - - - 1.000 - - - - -
13. si:rp71-36a1.1 ENSDARG00000095295 13 1 - - - 1.000 - - - - - si:rp71-36a1.1 [Source:ZFIN;Acc:ZDB-GENE-050208-407]
14. bmpr2b ENSDARG00000020057 8 1 - - - 1.000 - - - - - bone morphogenetic protein receptor, type II b (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-2]
15. CU856140.1 CU856140.1 4316 1 - - - 1.000 - - - - -
16. si:ch211-113a14.29_1 4 1 - - 1.000 - - - - - - si:ch211-113a14.29
17. ZNF423 ENSDARG00000059707 11 1 - - - 1.000 - - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
18. buc ENSDARG00000096095 0 1 - - - 1.000 - - - - - bucky ball [Source:ZFIN;Acc:ZDB-GENE-070117-694]
19. si:dkey-27p18.6 4 1 - - - 1.000 - - - - - si:dkey-27p18.6, transcript variant X1
20. TTC21A 0 1 - - - 1.000 - - - - - tetratricopeptide repeat domain 21A, transcript variant X4
21. def8_1 ENSDARG00000068208 1 1 - - 1.000 - - - - - - differentially expressed in FDCP 8 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041114-96]
22. gnrh3 ENSDARG00000056214, ENSDARG00000112890 226 1 - - 1.000 - - - - - - gonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
23. BX119910.15 BX119910.15 4 1 - - - 1.000 - - - - -
24. mvb12ba ENSDARG00000091619 18 1 - - - 1.000 - - - - - multivesicular body subunit 12Ba [Source:ZFIN;Acc:ZDB-GENE-060929-372]
25. si:dkey-72l17.1 si:dkey-72l17.1 0 1 - - - 1.000 - - - - -
26. RAP1GDS1 ENSDARG00000073741 0 1 - - - 1.000 - - - - - Rap1 GTPase-GDP dissociation stimulator 1 [Source:HGNC Symbol;Acc:HGNC:9859]
27. chia.3 ENSDARG00000009612 14 1 - - 1.000 - - - - - - chitinase, acidic.3 [Source:ZFIN;Acc:ZDB-GENE-040426-2891]
28. crygmxl1 ENSDARG00000018797 7 1 - - - 1.000 - - - - - crystallin, gamma MX, like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-392]
29. AKNA ENSDARG00000087110 39 1 - - - 1.000 - - - - - AT-hook transcription factor [Source:ZFIN;Acc:ZDB-GENE-091204-170]
30. si:ch211-103n10.5 ENSDARG00000077504, ENSDARG00000116548 8 1 - - - 1.000 - - - - - si:ch211-103n10.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5155]
31. si:dkeyp-104f11.9 ENSDARG00000096715 81 1 - - 1.000 - - - - - - si:dkeyp-104f11.9 [Source:ZFIN;Acc:ZDB-GENE-130603-41]
32. CU469509.3 CU469509.3 1 1 - - - 1.000 - - - - -
33. sox8 sox8 109 1 - - - 1.000 - - - - -
34. CR388416.2 CR388416.2 3 1 - - - 1.000 - - - - -
35. U6_21 U6_21 0 1 - - - 1.000 - - - - -
36. vwf ENSDARG00000077231 5 1 - - - 1.000 - - - - - von Willebrand factor [Source:ZFIN;Acc:ZDB-GENE-070103-1]
37. BX465848.2 ENSDARG00000116920 6 1 - - - 1.000 - - - - -
38. si:ch211-187d1.1 si:ch211-187d1.1 4 1 - - 1.000 - - - - - -
39. si:dkeyp-13a3.6 3 1 - - - - 1.000 - - - - si:dkeyp-13a3.6
40. TRIM14_5 TRIM14_5 2 1 - - 1.000 - - - - - -
41. si:ch211-262h13.6 si:ch211-262h13.6 0 1 - - - 1.000 - - - - -
42. si:ch211-67f24.7 ENSDARG00000092721, ENSDARG00000092896 11 1 - - - 1.000 - - - - - si:ch211-67f24.7 [Source:ZFIN;Acc:ZDB-GENE-090313-129]
43. snoU13 snoU13 2 1 - - - 1.000 - - - - -
44. PATL2 PATL2 10 1 - - - 1.000 - - - - -
45. pcdh1a6 ENSDARG00000097170 6 1 - - - 1.000 - - - - - protocadherin 1 alpha 6 [Source:ZFIN;Acc:ZDB-GENE-050203-2]
46. kcnq2a ENSDARG00000075307 7 1 - - - 1.000 - - - - - potassium voltage-gated channel, KQT-like subfamily, member 2a [Source:ZFIN;Acc:ZDB-GENE-080220-37]
47. slc35f1 ENSDARG00000053003 0 1 - - - 1.000 - - - - - solute carrier family 35, member F1 [Source:ZFIN;Acc:ZDB-GENE-060503-463]
48. si:ch73-44m9.1 ENSDARG00000077115 3 1 - - 1.000 - - - - - - si:ch73-44m9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-289]
49. C11H3orf83_1 C11H3orf83_1 3 1 - - - 1.000 - - - - -
50. si:dkeyp-82a1.8 ENSDARG00000095539 6 1 - - - 1.000 - - - - - si:dkeyp-82a1.8 [Source:ZFIN;Acc:ZDB-GENE-081104-479]
51. crygm2f ENSDARG00000078134, ENSDARG00000112285 2 1 - - - 1.000 - - - - - crystallin, gamma M2f [Source:ZFIN;Acc:ZDB-GENE-080220-17]
52. si:dkey-91i10.7 si:dkey-91i10.7 9 1 - - 1.000 - - - - - -
53. si:ch211-145h19.2 7 1 - - - 1.000 - - - - - si:ch211-145h19.2
54. si:ch73-138e16.6 ENSDARG00000101044 2 1 - - 1.000 - - - - - - si:ch73-138e16.6 [Source:ZFIN;Acc:ZDB-GENE-070705-205]
55. CACNG5 CACNG5 1 1 - - - 1.000 - - - - -
56. RAB31 0 1 - - - 1.000 - - - - - RAB31, member RAS oncogene family, transcript variant X1
57. olfcg4 ENSDARG00000099773 1 1 - - - 1.000 - - - - - olfactory receptor C family, g4 [Source:ZFIN;Acc:ZDB-GENE-060503-66]
58. rhol ENSDARG00000070666 0 1 - - - 1.000 - - - - - rhodopsin, like [Source:ZFIN;Acc:ZDB-GENE-070424-6]
59. TMC5 ENSDARG00000013252 22 1 - - 1.000 - - - - - - transmembrane channel like 5 [Source:ZFIN;Acc:ZDB-GENE-120411-6]
60. si:ch211-112l17.3 si:ch211-112l17.3 8 1 - - - 1.000 - - - - -
61. lmbrd2a ENSDARG00000099566 15 1 - - - 1.000 - - - - - LMBR1 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050417-32]
62. CR356223.2 ENSDARG00000100655 4 1 - - - 1.000 - - - - -
63. spo11 ENSDARG00000013837 7 1 - - 1.000 - - - - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
64. kcnma1b 0 1 - - - 1.000 - - - - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1b
65. notchl ENSDARG00000088308 28 1 - - - - 1.000 - - - - notch homolog, like [Source:ZFIN;Acc:ZDB-GENE-070220-2]
66. GOLT1A ENSDARG00000088933 14 1 - - 1.000 - - - - - - golgi transport 1A [Source:ZFIN;Acc:ZDB-GENE-141212-320]
67. il11b ENSDARG00000058557 17 1 - - - 1.000 - - - - - interleukin 11b [Source:ZFIN;Acc:ZDB-GENE-051019-2]
68. arhgap30 arhgap30 6 1 - - - 1.000 - - - - -
69. hbaa2 ENSDARG00000069735 10 1 - - - - 1.000 - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
70. pcdh2ab7 7 1 - - - 1.000 - - - - - protocadherin 2 alpha b 7
71. si:dkeyp-66d7.4 si:dkeyp-66d7.4 2 1 - - 1.000 - - - - - -
72. HTRA3 ENSDARG00000010925 0 1 - - - 1.000 - - - - - HtrA serine peptidase 3 [Source:HGNC Symbol;Acc:HGNC:30406]
73. ABCC6 ABCC6 5 1 - - - 1.000 - - - - -
74. si:dkey-106m10.5 si:dkey-106m10.5 10 1 - - - 1.000 - - - - -
75. ANKRD34C 13 1 - - 1.000 - - - - - - ankyrin repeat domain 34C
76. ADAMTS15_1 ADAMTS15_1 11 1 - - - 1.000 - - - - -
77. CABZ01059406.1 ENSDARG00000088775 1 1 - - - 1.000 - - - - -
78. ENSDARG00000063316 ENSDARG00000063316 4 1 - - - 1.000 - - - - -
79. si:dkey-58f10.10 ENSDARG00000094284 4 1 - - - 1.000 - - - - - si:dkey-58f10.10 [Source:ZFIN;Acc:ZDB-GENE-060526-312]
80. BX511182.1 BX511182.1 8 1 - - - 1.000 - - - - -
81. si:dkey-149m13.5 ENSDARG00000094653 1 1 - - 1.000 - - - - - - si:dkey-149m13.5 [Source:ZFIN;Acc:ZDB-GENE-110913-74]
82. mamdc2a ENSDARG00000098345 21 1 - - - 1.000 - - - - - MAM domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-16]
83. si:ch211-278f21.4 si:ch211-278f21.4 0 1 - - - 1.000 - - - - -
84. elmod3 ENSDARG00000074742 6 1 - - - 1.000 - - - - - ELMO/CED-12 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-471]
85. ugt5g2 ENSDARG00000043901, ENSDARG00000112752 1 1 - - - 1.000 - - - - - UDP glucuronosyltransferase 5 family, polypeptide G2 [Source:ZFIN;Acc:ZDB-GENE-081028-66]
86. edn3b ENSDARG00000086669 8 1 - - - 1.000 - - - - - endothelin 3b [Source:ZFIN;Acc:ZDB-GENE-090313-235]
87. si:zfos-44h1.1 si:zfos-44h1.1 1 1 - - - 1.000 - - - - -
88. CABZ01011032.1 CABZ01011032.1 1 1 - - - 1.000 - - - - -
89. GPX2 ENSDARG00000089149 10 1 - - - 1.000 - - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100334384]
90. agbl5 ENSDARG00000045900 2 1 - - - 1.000 - - - - - ATP/GTP binding protein-like 5 [Source:ZFIN;Acc:ZDB-GENE-040822-29]
91. si:ch211-71m22.3 ENSDARG00000079075 4 1 - - - - 1.000 - - - - si:ch211-71m22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-195]
92. vti1a ENSDARG00000045065 7 1 - - - 1.000 - - - - - vesicle transport through interaction with t-SNAREs 1A [Source:ZFIN;Acc:ZDB-GENE-050809-135]
93. RIMS2 RIMS2 2 1 - - - 1.000 - - - - -
94. zgc:175136 ENSDARG00000103024 4 1 - - - 1.000 - - - - - zgc:175136 [Source:ZFIN;Acc:ZDB-GENE-080204-122]
95. csrp1b ENSDARG00000030980 2 1 - - 1.000 - - - - - - cysteine and glycine-rich protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-252]
96. cpo ENSDARG00000077688 1 1 - - - 1.000 - - - - - carboxypeptidase O [Source:ZFIN;Acc:ZDB-GENE-070619-6]
97. hes2.1 ENSDARG00000074897 10 1 - - 1.000 - - - - - - hes family bHLH transcription factor 2, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-081104-104]
98. erap2 ENSDARG00000098618 16 1 - - - 1.000 - - - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
99. PEG3_13 PEG3_13 5 1 - - - 1.000 - - - - -
100. EGFR_1 EGFR_1 2 1 - - 1.000 - - - - - -

There are 248 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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