Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nkx3.2

Gene Name Gene ID Reads Annotation
nkx3.2 ENSDARG00000037639 575 NK3 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030127-1]










Genes with expression patterns similar to nkx3.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nkx3.2 ENSDARG00000037639 575 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NK3 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030127-1]
2. col9a3 ENSDARG00000037845 6564 2.427 0.773 - - - - 0.871 0.783 - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
3. tgfbi ENSDARG00000071586 17779 2.406 0.760 - - - - 0.858 0.788 - - transforming growth factor, beta-induced [Source:ZFIN;Acc:ZDB-GENE-030131-73]
4. plod2 ENSDARG00000011821 1656 2.377 0.806 - - - - 0.797 0.774 - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
5. PAQR4 PAQR4 2150 2.333 - 0.720 - - - 0.827 0.786 - -
6. fam46bb 601 2.32 - 0.777 - - - 0.767 0.776 - - family with sequence similarity 46, member Bb
7. usp28 ENSDARG00000008880 1850 2.297 0.786 0.805 - - - - 0.706 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
8. plcl1 ENSDARG00000067676 2457 2.296 - 0.710 - - - 0.771 0.815 - - phospholipase C like 1 [Source:ZFIN;Acc:ZDB-GENE-090313-194]
9. aqp4 ENSDARG00000010565 624 2.284 0.714 - - - - 0.835 0.735 - - aquaporin 4 [Source:ZFIN;Acc:ZDB-GENE-040724-152]
10. CR392006.1 CR392006.1 1401 2.276 0.806 - - - - 0.749 0.721 - -
11. BX842614.2 BX842614.2 799 2.269 - 0.721 - - - 0.807 0.741 - -
12. sptb ENSDARG00000030490 7128 2.262 0.762 - - - - 0.737 0.763 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
13. hhatla ENSDARG00000039051 6598 2.252 0.745 0.735 - - - - 0.772 - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
14. tbx15 ENSDARG00000002582 755 2.23 0.777 0.732 - - - - 0.721 - - T-box 15 [Source:ZFIN;Acc:ZDB-GENE-020529-1]
15. BX470254.1 ENSDARG00000097402 1389 2.197 - 0.772 - - - 0.711 0.714 - -
16. col27a1a 1747 2.191 - 0.708 - - - 0.705 0.778 - - collagen, type XXVII, alpha 1a
17. ryr3 ENSDARG00000071331 6795 2.153 0.717 - - - - 0.706 0.730 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
18. pygma ENSDARG00000055518 15972 2.134 0.703 0.724 - - - - 0.707 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
19. BX323459.1 ENSDARG00000109508 1476 1.751 - - - - - 0.842 0.909 - -
20. hhip ENSDARG00000060397, ENSDARG00000111482, ENSDARG00000111668 3025 1.735 - - - - - 0.846 0.889 - - hedgehog interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4827]
21. COLGALT2 ENSDARG00000014670 63 1.674 - - - - - 0.911 0.763 - - collagen beta(1-O)galactosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070222-1]
22. loxl1 ENSDARG00000054451 2485 1.662 - 0.811 - - - 0.851 - - - lysyl oxidase-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-693]
23. aox3 aox3 399 1.656 - 0.872 - - - - 0.784 - -
24. shha ENSDARG00000068567, ENSDARG00000111447 1497 1.647 - - - - - 0.715 0.932 - - sonic hedgehog a [Source:ZFIN;Acc:ZDB-GENE-980526-166]
25. myhz2 ENSDARG00000012944 69921 1.646 0.816 - - - - - 0.830 - - myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
26. tppp3 ENSDARG00000030463 992 1.632 - - - - - 0.757 0.875 - - tubulin polymerization-promoting protein family member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1909]
27. crispld1b ENSDARG00000013293 200 1.632 - 0.708 - - - - 0.924 - - cysteine-rich secretory protein LCCL domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1204]
28. hapln1a ENSDARG00000089769 12334 1.628 0.880 - - - - - 0.748 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
29. chad ENSDARG00000045071 903 1.62 - - - - - 0.829 0.791 - - chondroadherin [Source:ZFIN;Acc:ZDB-GENE-040426-1130]
30. tgfb3 ENSDARG00000019367 2327 1.618 - - - - - 0.776 0.842 - - transforming growth factor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-030723-4]
31. notum2 ENSDARG00000088411 823 1.617 0.826 0.791 - - - - - - - notum pectinacetylesterase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-77]
32. si:ch211-152c2.3 ENSDARG00000045898 3448 1.614 - - - - - 0.763 0.851 - - si:ch211-152c2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9914]
33. pi15a ENSDARG00000045378 2361 1.613 - - - - - 0.871 0.742 - - peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
34. cthrc1a ENSDARG00000087198 1001 1.605 - - - - - 0.754 0.851 - - collagen triple helix repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-040808-22]
35. susd5 ENSDARG00000088277 439 1.604 - 0.742 - - - 0.862 - - - sushi domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-120215-196]
36. VWA7 ENSDARG00000061462 816 1.596 - 0.891 - - - - 0.705 - - von Willebrand factor A domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060503-234]
37. FRMD5 ENSDARG00000075942 569 1.593 - 0.793 - - - - 0.800 - - FERM domain containing 5 [Source:HGNC Symbol;Acc:HGNC:28214]
38. CABZ01026370.1 CABZ01026370.1 286 1.588 - - - - - 0.865 0.723 - -
39. CU571255.1 CU571255.1 902 1.587 - 0.778 - - - - 0.809 - -
40. CABZ01044297.1 CABZ01044297.1 2015 1.582 - - - - - 0.838 0.744 - -
41. vwde ENSDARG00000103443 5758 1.578 - - - - - 0.790 0.788 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
42. mmp23bb ENSDARG00000009825 133 1.573 - 0.754 - - - - 0.819 - - matrix metallopeptidase 23bb [Source:ZFIN;Acc:ZDB-GENE-050417-448]
43. nexn ENSDARG00000057317 10972 1.57 0.795 - - - - - 0.775 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
44. trdn ENSDARG00000041779 4283 1.569 0.825 - - - - - 0.744 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
45. ntd5 ENSDARG00000040944 4988 1.567 - - - - - 0.799 0.768 - - ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
46. LMOD3 ENSDARG00000062662, ENSDARG00000115769 456 1.567 0.796 - - - - 0.771 - - - leiomodin 3 (fetal) [Source:ZFIN;Acc:ZDB-GENE-090313-353]
47. CR354540.2 ENSDARG00000117517 18452 1.565 0.861 - - - - - 0.704 - -
48. plxnb1a ENSDARG00000075821 1702 1.565 0.726 - - - - - 0.839 - - plexin b1a [Source:ZFIN;Acc:ZDB-GENE-050302-63]
49. mkxa ENSDARG00000075450, ENSDARG00000114299 233 1.558 - 0.705 - - - 0.853 - - - mohawk homeobox a [Source:ZFIN;Acc:ZDB-GENE-080513-1]
50. ntla ntla 926 1.551 - - - - - 0.823 0.728 - -
51. spon2a ENSDARG00000025465, ENSDARG00000115300 294 1.545 0.783 - - - - - 0.762 - - spondin 2a, extracellular matrix protein [Source:ZFIN;Acc:ZDB-GENE-990415-160]
52. C13H10orf71 3489 1.534 0.749 - - - - - 0.785 - - chromosome 13 C10orf71 homolog
53. myhc4 ENSDARG00000035438 1322 1.53 - - - - - 0.724 0.806 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
54. col9a2 ENSDARG00000024492 20234 1.526 0.742 - - - - 0.784 - - - procollagen, type IX, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9786]
55. CR792456.1 CR792456.1 783 1.523 - - - - - 0.730 0.793 - -
56. scara3 ENSDARG00000008060 169 1.522 - - - - - 0.782 0.740 - - scavenger receptor class A, member 3 [Source:ZFIN;Acc:ZDB-GENE-041014-317]
57. TMPO TMPO 3264 1.522 0.781 - - - - - 0.741 - -
58. crip2 ENSDARG00000070670 4844 1.519 - - - - - 0.733 0.786 - - cysteine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2889]
59. tnw 16679 1.518 - 0.703 - - - - 0.815 - - tenascin W, transcript variant X2
60. ptrfa ptrfa 4363 1.516 0.813 - - - - 0.703 - - -
61. twist2 ENSDARG00000078266 499 1.516 - - - - - 0.782 0.734 - - twist2 [Source:ZFIN;Acc:ZDB-GENE-980526-235]
62. tmem47 ENSDARG00000057322 4691 1.51 - 0.739 - - - - 0.771 - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
63. si:dkey-181m9.5 si:dkey-181m9.5 1079 1.508 0.776 - - - - - 0.732 - -
64. zgc:175280 ENSDARG00000099111 71 1.507 - - - - - 0.773 0.734 - - zgc:175280 [Source:ZFIN;Acc:ZDB-GENE-080219-39]
65. slc22a15 ENSDARG00000055445 188 1.506 - - 0.739 - - - 0.767 - - solute carrier family 22, member 15 [Source:ZFIN;Acc:ZDB-GENE-070928-5]
66. epyc ENSDARG00000056950 7783 1.505 - - - - - 0.750 0.755 - - epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
67. smtnl1 ENSDARG00000041257 7410 1.504 0.777 - - - - - 0.727 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
68. murcb murcb 13655 1.502 0.739 - - - - - 0.763 - -
69. CRAT CRAT 521 1.502 - 0.751 - - - - 0.751 - -
70. SMOC1 ENSDARG00000088255 507 1.502 0.740 - - - - - 0.762 - - SPARC related modular calcium binding 1 [Source:ZFIN;Acc:ZDB-GENE-110310-7]
71. CR450814.3 CR450814.3 608 1.499 - - - - - 0.782 0.717 - -
72. pdgfrl ENSDARG00000006456, ENSDARG00000116983 1020 1.497 0.705 - - - - - 0.792 - - platelet-derived growth factor receptor-like [Source:ZFIN;Acc:ZDB-GENE-040426-901]
73. NEURL2 ENSDARG00000062446, ENSDARG00000110488 483 1.493 0.721 - - - - - 0.772 - - neuralized E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-070410-31]
74. col11a2 ENSDARG00000012422 3204 1.492 - 0.702 - - - - 0.790 - - collagen, type XI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-000208-23]
75. myh7bb ENSDARG00000035322 287 1.488 - 0.724 - - - - 0.764 - - myosin, heavy chain 7B, cardiac muscle, beta b [Source:ZFIN;Acc:ZDB-GENE-090311-5]
76. matn4 ENSDARG00000015947 10967 1.486 0.722 - - - - - 0.764 - - matrilin 4 [Source:ZFIN;Acc:ZDB-GENE-050208-64]
77. xpr1 xpr1 840 1.485 - 0.727 - - - - 0.758 - -
78. tgm2a ENSDARG00000070157 4516 1.485 0.746 - - - - - 0.739 - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
79. PTGES3L PTGES3L 4801 1.483 0.743 - - - - 0.740 - - -
80. cacnb1 ENSDARG00000002167 1402 1.481 - 0.736 - - - - 0.745 - - calcium channel, voltage-dependent, beta 1 subunit [Source:ZFIN;Acc:ZDB-GENE-040718-399]
81. twf2a ENSDARG00000094792 687 1.48 0.717 - - - - - 0.763 - - twinfilin actin-binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7638]
82. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.48 0.767 0.713 - - - - - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
83. PTPLA PTPLA 4044 1.479 0.715 0.764 - - - - - - -
84. stac3 ENSDARG00000098883 1765 1.479 - 0.758 - - - - 0.721 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
85. sncga ENSDARG00000034423, ENSDARG00000112260 5469 1.479 - - - - - 0.749 0.730 - - synuclein, gamma a [Source:ZFIN;Acc:ZDB-GENE-050417-18]
86. si:dkeyp-12a9.5 3058 1.474 - - - - - 0.748 0.726 - - si:dkeyp-12a9.5
87. MYOT ENSDARG00000076312 1791 1.474 0.707 - - - - - 0.767 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
88. svila ENSDARG00000055075, ENSDARG00000110002, ENSDARG00000114888 4078 1.471 0.748 - - - - - 0.723 - - supervillin a [Source:ZFIN;Acc:ZDB-GENE-990706-5]
89. NRAP ENSDARG00000009341 3565 1.47 0.730 - - - - - 0.740 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
90. acana ENSDARG00000035891 118 1.468 - - - - - 0.732 0.736 - - aggrecan a [Source:ZFIN;Acc:ZDB-GENE-050208-221]
91. BX324201.1 BX324201.1 3302 1.466 0.716 - - - - - 0.750 - -
92. enpp1 ENSDARG00000005789 3267 1.465 0.702 - - - - - 0.763 - - ectonucleotide pyrophosphatase/phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-172]
93. EHBP1L1 EHBP1L1 2500 1.465 0.724 - - - - - 0.741 - -
94. klhl41b ENSDARG00000006757 10762 1.464 0.722 - - - - - 0.742 - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
95. LIMD1_1 LIMD1_1 348 1.461 0.751 - - - - - 0.710 - -
96. CU928220.1 CU928220.1 146 1.46 - - - - - 0.709 0.751 - -
97. IGSF10 ENSDARG00000077497 317 1.448 - 0.719 - - - 0.729 - - - immunoglobulin superfamily, member 10 [Source:ZFIN;Acc:ZDB-GENE-130530-827]
98. rtn2a ENSDARG00000016088 12184 1.447 0.713 - - - - - 0.734 - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
99. mybpc2b ENSDARG00000021265 9618 1.442 0.716 - - - - - 0.726 - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
100. fgf6a ENSDARG00000009351 799 1.438 - 0.705 - - - - 0.733 - - fibroblast growth factor 6a [Source:ZFIN;Acc:ZDB-GENE-980526-559]

There are 705 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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