Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nfil3-2

Gene Name Gene ID Reads Annotation
nfil3-2 658 nuclear factor, interleukin 3 regulated, member 2, transcript variant X1










Genes with expression patterns similar to nfil3-2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nfil3-2 658 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nuclear factor, interleukin 3 regulated, member 2, transcript variant X1
2. plch2a ENSDARG00000059960 222 2.199 0.717 - - - - 0.741 - 0.741 - phospholipase C, eta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6367]
3. unc119b ENSDARG00000044362 1528 1.688 - - - 0.887 - - - - 0.801 unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
4. tbx2b ENSDARG00000006120, ENSDARG00000116135 1599 1.655 - - - 0.922 - - 0.733 - - T-box 2b [Source:ZFIN;Acc:ZDB-GENE-990726-27]
5. LDLRAD4 LDLRAD4 1237 1.642 - - - 0.867 - - - - 0.775
6. marcksa ENSDARG00000004049 2518 1.641 - - - 0.903 - - - - 0.738 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
7. hes2.2 ENSDARG00000068168 197 1.629 - - - 0.923 - - - - 0.706 hes family bHLH transcription factor 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060825-55]
8. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.619 - - - 0.866 - - - 0.753 - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
9. dhx9 ENSDARG00000079725 1241 1.605 - 0.723 - 0.882 - - - - - DEAH (Asp-Glu-Ala-His) box helicase 9 [Source:ZFIN;Acc:ZDB-GENE-070912-171]
10. arrdc2 ENSDARG00000020761 621 1.599 0.777 - - - - - 0.822 - - arrestin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7146]
11. AKAP13_1 ENSDARG00000079994 444 1.599 - 0.701 - 0.898 - - - - - A-kinase anchoring protein 13 [Source:HGNC Symbol;Acc:HGNC:371]
12. gyltl1b 1368 1.596 - - - 0.842 - - 0.754 - - glycosyltransferase-like 1b, transcript variant X3
13. st18 663 1.596 - - - 0.880 - - - - 0.716 suppression of tumorigenicity 18, zinc finger
14. CLIP3 ENSDARG00000054456 734 1.589 - - - 0.884 - - - 0.705 - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
15. lppr3a lppr3a 1294 1.588 - - - 0.874 - - - - 0.714
16. igbp1 ENSDARG00000002184, ENSDARG00000117141 879 1.576 - - - 0.861 - - - 0.715 - immunoglobulin (CD79A) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2928]
17. RNASEH2C ENSDARG00000089637 1673 1.564 - - - 0.817 - - 0.747 - - ribonuclease H2, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-2469]
18. IPO11 ENSDARG00000054224 616 1.559 - 0.738 - 0.821 - - - - - importin 11 [Source:ZFIN;Acc:ZDB-GENE-040711-1]
19. CABZ01080568.2 CABZ01080568.2 2137 1.554 - - - 0.830 - - - 0.724 -
20. mcoln1a ENSDARG00000002285 639 1.55 - - - 0.841 - - 0.709 - - mucolipin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2704]
21. usp42 ENSDARG00000077300 926 1.545 0.700 - - 0.845 - - - - - ubiquitin specific peptidase 42 [Source:ZFIN;Acc:ZDB-GENE-030131-5739]
22. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.54 - - - 0.776 - - - - 0.764 pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
23. EDEM3 ENSDARG00000074129 805 1.535 0.777 - - - - 0.758 - - - ER degradation enhancer, mannosidase alpha-like 3 [Source:ZFIN;Acc:ZDB-GENE-070801-5]
24. ndrg4 ENSDARG00000103937 1234 1.532 - - - 0.830 - - - - 0.702 NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
25. RHOBTB1 ENSDARG00000079468 189 1.527 0.706 - - - - - - 0.821 - Rho related BTB domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130530-871]
26. plxna3 ENSDARG00000007172 1412 1.521 - - - 0.800 - - - - 0.721 plexin A3 [Source:ZFIN;Acc:ZDB-GENE-070613-1]
27. arf4a ENSDARG00000045989, ENSDARG00000103858 2545 1.521 - - - 0.784 - - 0.737 - - ADP-ribosylation factor 4a [Source:ZFIN;Acc:ZDB-GENE-040801-109]
28. lrrc58b ENSDARG00000063509 1357 1.517 - - - 0.732 - - 0.785 - - leucine rich repeat containing 58b [Source:ZFIN;Acc:ZDB-GENE-050309-29]
29. golga7ba ENSDARG00000036295 1460 1.515 - - - 0.727 - - - - 0.788 golgin A7 family, member Ba [Source:ZFIN;Acc:ZDB-GENE-050417-14]
30. TIAM1 TIAM1 837 1.514 0.714 - - 0.800 - - - - -
31. mlx ENSDARG00000037891 433 1.514 - 0.776 - 0.738 - - - - - MLX, MAX dimerization protein [Source:ZFIN;Acc:ZDB-GENE-050522-316]
32. prrc2c ENSDARG00000057583, ENSDARG00000116399 1673 1.51 0.761 - - - - - - 0.749 - proline-rich coiled-coil 2C [Source:ZFIN;Acc:ZDB-GENE-081104-156]
33. sgce ENSDARG00000012138 912 1.509 - - - 0.788 - - - 0.721 - sarcoglycan, epsilon [Source:ZFIN;Acc:ZDB-GENE-030724-1]
34. shisa2 856 1.507 0.742 - - - - - 0.765 - - shisa family member 2, transcript variant X2
35. RANBP2 ENSDARG00000093125 1854 1.501 - 0.724 - 0.777 - - - - - RAN binding protein 2 [Source:HGNC Symbol;Acc:HGNC:9848]
36. ZC3H4 ENSDARG00000078355 1888 1.483 - 0.703 - 0.780 - - - - - zinc finger CCCH-type containing 4 [Source:ZFIN;Acc:ZDB-GENE-100330-1]
37. gpsm1a ENSDARG00000092517 784 1.464 - - - - - - - 0.755 0.709 G protein signaling modulator 1a [Source:ZFIN;Acc:ZDB-GENE-060526-302]
38. gpm6ab ENSDARG00000004621 5825 1.463 - - - - - - 0.730 - 0.733 glycoprotein M6Ab [Source:ZFIN;Acc:ZDB-GENE-030710-8]
39. CR847496.2 ENSDARG00000116070 802 1.462 - 0.752 - 0.710 - - - - - platelet derived growth factor c [Source:NCBI gene;Acc:560564]
40. usp36 ENSDARG00000032327 1884 1.458 - - - 0.710 - - - - 0.748 ubiquitin specific peptidase 36 [Source:ZFIN;Acc:ZDB-GENE-030131-5450]
41. dnajb12b ENSDARG00000087473 3811 1.451 - - - - - - 0.724 - 0.727 DnaJ (Hsp40) homolog, subfamily B, member 12b [Source:ZFIN;Acc:ZDB-GENE-070410-128]
42. BX005001.1 BX005001.1 741 1.45 - - - - - 0.709 0.741 - -
43. prpsap2 ENSDARG00000019326 1463 1.449 - - - - - - - 0.720 0.729 phosphoribosyl pyrophosphate synthetase-associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2077]
44. atoh1b ENSDARG00000099564 494 1.444 - - - - - - - 0.742 0.702 atonal bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-041201-1]
45. msl2b ENSDARG00000039430 1003 1.439 - 0.736 - - - 0.703 - - - male-specific lethal 2 homolog b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1621]
46. fmnl2b ENSDARG00000075041 1744 1.435 - - - 0.730 - - - - 0.705 formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
47. bach1 bach1 1121 1.433 - - - 0.703 - 0.730 - - -
48. clvs2 ENSDARG00000053122 1390 1.428 - - - 0.721 - - - 0.707 - clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
49. tmem33 ENSDARG00000041332 2883 1.423 - - - 0.715 - 0.708 - - - transmembrane protein 33 [Source:ZFIN;Acc:ZDB-GENE-030131-5425]
50. SLC22A23_1 SLC22A23_1 308 1.42 - - - - - - - 0.712 0.708
51. foxp1b ENSDARG00000014181 2594 1.419 - - - 0.716 - - - - 0.703 forkhead box P1b [Source:ZFIN;Acc:ZDB-GENE-041203-1]
52. cyp2aa1 ENSDARG00000099003 297 1.411 0.704 - - - - - 0.707 - - cytochrome P450, family 2, subfamily AA, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-070424-33]
53. lphn3.1 lphn3.1 756 1.409 - - - - - - - 0.700 0.709
54. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 0.943 - - - 0.943 - - - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
55. CABZ01085858.1 CABZ01085858.1 355 0.94 - - - 0.940 - - - - -
56. znf710a ENSDARG00000014680 582 0.931 - - - 0.931 - - - - - zinc finger protein 710a [Source:ZFIN;Acc:ZDB-GENE-030131-5559]
57. pmelb ENSDARG00000033760 206 0.93 - - - 0.930 - - - - - premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
58. rprd2b ENSDARG00000074676 809 0.928 - - - 0.928 - - - - - regulation of nuclear pre-mRNA domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110719-1]
59. lhx9 ENSDARG00000056979 249 0.928 - - - 0.928 - - - - - LIM homeobox 9 [Source:ZFIN;Acc:ZDB-GENE-050417-210]
60. ptch1 ENSDARG00000016404, ENSDARG00000095859, ENSDARG00000116142 1113 0.927 - - - 0.927 - - - - - patched 1 [Source:ZFIN;Acc:ZDB-GENE-980526-196]
61. FBXL3 FBXL3 1769 0.927 - - - 0.927 - - - - -
62. ppig ENSDARG00000044431 3427 0.926 - - - 0.926 - - - - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
63. WDR89 ENSDARG00000077265 322 0.926 - - - 0.926 - - - - - WD repeat domain 89 [Source:ZFIN;Acc:ZDB-GENE-090319-3]
64. sfi1 ENSDARG00000053992 1075 0.924 - - - 0.924 - - - - - SFI1 centrin binding protein [Source:ZFIN;Acc:ZDB-GENE-080206-4]
65. plagx ENSDARG00000036855 3768 0.924 - - - 0.924 - - - - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
66. lmo1 ENSDARG00000034504 260 0.923 - - - 0.923 - - - - - LIM domain only 1 [Source:ZFIN;Acc:ZDB-GENE-021115-6]
67. tdrd3 ENSDARG00000025421 633 0.922 - - - 0.922 - - - - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
68. NHSL1 NHSL1 182 0.921 - - - 0.921 - - - - -
69. xpc ENSDARG00000039754 515 0.921 - - - 0.921 - - - - - xeroderma pigmentosum, complementation group C [Source:ZFIN;Acc:ZDB-GENE-030131-8461]
70. fam49a ENSDARG00000006672 939 0.921 - - - 0.921 - - - - - family with sequence similarity 49, member A [Source:ZFIN;Acc:ZDB-GENE-031002-50]
71. creb1b ENSDARG00000093420 524 0.92 - - - 0.920 - - - - - cAMP responsive element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-050417-355]
72. PARD3B PARD3B 401 0.92 - - - 0.920 - - - - -
73. tuba4l ENSDARG00000074289 101 0.917 - - - 0.917 - - - - - tubulin, alpha 4 like [Source:ZFIN;Acc:ZDB-GENE-030131-5588]
74. supt20 ENSDARG00000078658 713 0.916 - - - 0.916 - - - - - SPT20 homolog, SAGA complex component [Source:ZFIN;Acc:ZDB-GENE-091204-264]
75. GPN1 ENSDARG00000043928 566 0.916 - - - 0.916 - - - - - GPN-loop GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-154]
76. cwc25 ENSDARG00000003382 2134 0.915 - - - 0.915 - - - - - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
77. smc2 ENSDARG00000017744, ENSDARG00000114076 2271 0.915 - - - 0.915 - - - - - structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]
78. C8H1orf106 C8H1orf106 2690 0.914 - - - 0.914 - - - - -
79. rx1 ENSDARG00000071684 247 0.914 - - - 0.914 - - - - - retinal homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-236]
80. rims2a ENSDARG00000101606 1088 0.912 - - - 0.912 - - - - - regulating synaptic membrane exocytosis 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1656]
81. fbxw2 ENSDARG00000009745 618 0.912 - - - 0.912 - - - - - F-box and WD repeat domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050522-303]
82. zgc:165515 ENSDARG00000116300 182 0.911 - - - 0.911 - - - - - zgc:165515 [Source:ZFIN;Acc:ZDB-GENE-030131-1772]
83. rexo1 ENSDARG00000026986 770 0.911 - - - 0.911 - - - - - REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]
84. ftr65 202 0.911 - - - 0.911 - - - - - finTRIM family, member 65
85. ccnh ENSDARG00000007657 745 0.911 - - - 0.911 - - - - - cyclin H [Source:ZFIN;Acc:ZDB-GENE-050320-13]
86. BX539313.3 ENSDARG00000098016 638 0.91 - - - 0.910 - - - - -
87. si:dkey-256i11.1 si:dkey-256i11.1 3373 0.908 - - - 0.908 - - - - -
88. ercc3 ENSDARG00000002402 340 0.908 - - - 0.908 - - - - - excision repair cross-complementation group 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3043]
89. gpm6bb ENSDARG00000001676 2005 0.907 - - - 0.907 - - - - - glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
90. anapc7 ENSDARG00000063005 1139 0.907 - - - 0.907 - - - - - anaphase promoting complex subunit 7 [Source:ZFIN;Acc:ZDB-GENE-081104-113]
91. ADCY3 ADCY3 537 0.907 - - - 0.907 - - - - -
92. srrm2 ENSDARG00000037965 1967 0.906 - - - 0.906 - - - - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
93. TTF1_5 TTF1_5 705 0.906 - - - 0.906 - - - - -
94. dixdc1b ENSDARG00000056267 307 0.906 - - - 0.906 - - - - - DIX domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-041008-148]
95. mus81 ENSDARG00000069326, ENSDARG00000111800 400 0.906 - - - 0.906 - - - - - MUS81 structure-specific endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2923]
96. phf10 ENSDARG00000070084 1210 0.906 - - - 0.906 - - - - - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
97. taf1b ENSDARG00000028937 879 0.906 - - - 0.906 - - - - - TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B [Source:ZFIN;Acc:ZDB-GENE-041008-2]
98. fam151b ENSDARG00000020024 255 0.905 - - - 0.905 - - - - - family with sequence similarity 151, member B [Source:ZFIN;Acc:ZDB-GENE-040801-38]
99. egr2a ENSDARG00000044098 1101 0.905 - - - 0.905 - - - - - early growth response 2a [Source:ZFIN;Acc:ZDB-GENE-030723-6]
100. rapgef5a ENSDARG00000075271 282 0.905 - - - 0.905 - - - - - Rap guanine nucleotide exchange factor (GEF) 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7681]

There are 1119 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA