Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nefla

Gene Name Gene ID Reads Annotation
nefla ENSDARG00000057568 62 neurofilament, light polypeptide a [Source:ZFIN;Acc:ZDB-GENE-091117-1]










Genes with expression patterns similar to nefla

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nefla ENSDARG00000057568 62 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 neurofilament, light polypeptide a [Source:ZFIN;Acc:ZDB-GENE-091117-1]
2. map7d2a ENSDARG00000068480 513 2.405 - 0.768 - - - 0.725 0.912 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
3. gphnb ENSDARG00000100851 118 1.923 - - - - - 0.949 0.974 - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
4. pax6b ENSDARG00000045936 349 1.895 - - - - - 0.942 0.953 - - paired box 6b [Source:ZFIN;Acc:ZDB-GENE-001031-1]
5. mir124-2 196 1.89 - - - - - 0.904 0.986 - - microRNA 124-2
6. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.84 - - - - - 0.844 0.996 - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
7. si:ch211-199o1.2 ENSDARG00000056210 33 1.836 0.989 - - - - 0.847 - - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
8. sox19b ENSDARG00000040266 532 1.831 - - - - - 0.900 0.931 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
9. CR407704.1 CR407704.1 188 1.831 - - - - - 0.949 0.882 - -
10. si:ch73-91k6.1 18 1.828 1.000 - - - - - 0.828 - - si:ch73-91k6.1
11. gpr186 ENSDARG00000094860 53 1.824 - - - - - 0.847 0.977 - - G protein-coupled receptor 186 [Source:ZFIN;Acc:ZDB-GENE-060503-489]
12. NAPB_1 NAPB_1 33 1.822 0.976 - - - - 0.846 - - -
13. gabrg2 ENSDARG00000053665 434 1.819 - - - - - 0.890 0.929 - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
14. glrbb ENSDARG00000052769, ENSDARG00000113828 467 1.813 - - - - - 0.847 0.966 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
15. urgcp ENSDARG00000036767 6 1.81 1.000 - - - - - - 0.810 - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
16. SLC35F4 ENSDARG00000103124 55 1.81 - - - - - 0.943 0.867 - - solute carrier family 35, member F4 [Source:ZFIN;Acc:ZDB-GENE-131121-49]
17. thsd7a thsd7a 194 1.809 - 0.872 - - - - 0.937 - -
18. GRM8_1 GRM8_1 85 1.803 - - - - - 0.807 0.996 - -
19. cabp2b ENSDARG00000052277 119 1.799 0.952 - - - - 0.847 - - - calcium binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-081028-55]
20. zgc:158463_1 ENSDARG00000089382 23 1.797 0.969 - - - - - 0.828 - - zgc:158463 [Source:ZFIN;Acc:ZDB-GENE-070410-9]
21. EPB41L1 EPB41L1 1896 1.796 - - - - - 0.824 0.972 - -
22. rrm2 ENSDARG00000020711, ENSDARG00000078069 1280 1.795 0.901 - - - - - 0.894 - - ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
23. ntrk2a ENSDARG00000059897 185 1.791 - - - - - 0.791 1.000 - - neurotrophic tyrosine kinase, receptor, type 2a [Source:ZFIN;Acc:ZDB-GENE-010126-1]
24. CABZ01063077.1 CABZ01063077.1 22 1.779 - - - - - 0.885 0.894 - -
25. neto1l ENSDARG00000071596 57 1.773 - - - - - 0.888 0.885 - - neuropilin (NRP) and tolloid (TLL)-like 1, like [Source:ZFIN;Acc:ZDB-GENE-091207-1]
26. dbx1a ENSDARG00000086393 3161 1.764 - - - - - 0.821 0.943 - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
27. GADD45G GADD45G 382 1.763 - - - - - 0.883 0.880 - -
28. tmem178b ENSDARG00000006747 173 1.761 - 0.879 - - - - 0.882 - - transmembrane protein 178B [Source:ZFIN;Acc:ZDB-GENE-040718-92]
29. TUBB8P7_2 TUBB8P7_2 565 1.759 - - - - - 0.823 0.936 - -
30. MPP3_1 MPP3_1 88 1.758 - - - - - 0.773 0.985 - -
31. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.757 - - - - - 0.782 0.975 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
32. cacng2a ENSDARG00000032565 99 1.751 - - - - - 0.815 0.936 - - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
33. nell2b ENSDARG00000062797 854 1.751 - - - - - 0.771 0.980 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
34. jag1a ENSDARG00000030289 1275 1.74 - - - - - 0.828 0.912 - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
35. si:ch211-247j9.1 ENSDARG00000079283 217 1.74 - - - - - 0.796 0.944 - - si:ch211-247j9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-212]
36. PEX5L PEX5L 179 1.739 - 0.878 - - - - 0.861 - -
37. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.735 - - - - - 0.749 0.986 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
38. chat chat 463 1.735 - - - - - 0.761 0.974 - -
39. slc8a2b ENSDARG00000100592 598 1.734 - - - - - 0.746 0.988 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
40. her4.3 ENSDARG00000070770 613 1.734 - - - - - 0.849 0.885 - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
41. fam219ab ENSDARG00000013813 591 1.733 - - - - - 0.805 0.928 - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
42. cdh7 582 1.731 - - - - - 0.780 0.951 - - cadherin 7, type 2, transcript variant X1
43. clstn3 ENSDARG00000073883 590 1.73 - - - - - 0.744 0.986 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
44. dtnbp1b ENSDARG00000055206 64 1.729 - - - - - 0.808 0.921 - - dystrobrevin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060503-889]
45. gng3 ENSDARG00000009553 2530 1.728 - - - - - 0.773 0.955 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
46. si:ch211-39a7.1 ENSDARG00000037427 31 1.727 - - - - - 0.847 0.880 - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
47. gpr173 ENSDARG00000042922 238 1.726 - - - - - 0.898 0.828 - - G protein-coupled receptor 173 [Source:ZFIN;Acc:ZDB-GENE-000710-1]
48. UBE2QL1 ENSDARG00000079276 3474 1.725 - - - - - 0.831 0.894 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
49. itm2ca ENSDARG00000043448 1265 1.721 - - - - - 0.769 0.952 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
50. mb21d2a mb21d2a 421 1.719 - - - - - 0.771 0.948 - -
51. C21H5orf24 C21H5orf24 333 1.718 - - - - - 0.749 0.969 - -
52. neurog1 ENSDARG00000056130 3924 1.718 - - - - - 0.742 0.976 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
53. slc35g2b ENSDARG00000045447 378 1.718 - - - - - 0.821 0.897 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
54. gsx1 ENSDARG00000035735 1243 1.714 - - - - - 0.716 0.998 - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
55. pax6a ENSDARG00000103379 3061 1.713 - - - - - 0.724 0.989 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
56. si:dkey-238f9.1 ENSDARG00000079446 51 1.713 - - - - - 0.833 0.880 - - si:dkey-238f9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-297]
57. C10H5orf63 C10H5orf63 17 1.713 - - - - - 0.885 0.828 - -
58. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 1.713 - - - - - 0.742 0.971 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
59. lrp11 ENSDARG00000034076 313 1.712 0.764 - - - - - 0.948 - - low density lipoprotein receptor-related protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-7847]
60. phactr3a ENSDARG00000058243 150 1.711 - - - - - 0.733 0.978 - - phosphatase and actin regulator 3a [Source:ZFIN;Acc:ZDB-GENE-080220-4]
61. kif5c ENSDARG00000076027 424 1.711 - 0.888 - - - - 0.823 - - kinesin family member 5C [Source:ZFIN;Acc:ZDB-GENE-081105-14]
62. slitrk3b ENSDARG00000074739 19 1.708 - - - - - 0.880 0.828 - - SLIT and NTRK-like family, member 3b [Source:ZFIN;Acc:ZDB-GENE-070912-352]
63. im:7162084 im:7162084 665 1.706 - - - - - 0.734 0.972 - -
64. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1.706 - - - - - 0.847 0.859 - -
65. lrrtm1 ENSDARG00000052713 1041 1.704 - - - - - 0.755 0.949 - - leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
66. APBB3 ENSDARG00000053771 654 1.703 - - - - - 0.771 0.932 - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
67. BX511271.1 BX511271.1 22 1.702 1.000 - - - 0.702 - - - -
68. tmem59l ENSDARG00000003655 1536 1.702 - - - - - 0.836 0.866 - - transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
69. chrna2b ENSDARG00000057025 217 1.697 - - - - - 0.742 0.955 - - cholinergic receptor, nicotinic, alpha 2b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-041001-99]
70. sv2bb ENSDARG00000060711 196 1.696 - - - - - 0.725 0.971 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
71. ctnnd2b ENSDARG00000003779 964 1.696 - - - - - 0.757 0.939 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
72. hsd17b7_1 ENSDARG00000088140 36 1.694 - 0.884 - - - - - 0.810 - hydroxysteroid (17-beta) dehydrogenase 7 [Source:ZFIN;Acc:ZDB-GENE-061013-378]
73. NPTXR NPTXR 241 1.691 - - - - - 0.714 0.977 - -
74. stx1b ENSDARG00000000503 2724 1.689 - - - - - 0.701 0.988 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
75. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 1.689 - - - - - 0.710 0.979 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
76. her8.2 ENSDARG00000069675 315 1.688 - - - - - 0.855 0.833 - - hairy-related 8.2 [Source:ZFIN;Acc:ZDB-GENE-060815-4]
77. INA INA 950 1.687 - - - - - 0.717 0.970 - -
78. dnajc5aa ENSDARG00000042948 2885 1.686 - - - - - 0.746 0.940 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
79. AGO1 ENSDARG00000092644 4521 1.686 - - - - - 0.727 0.959 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
80. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 1.685 - - - - - 0.791 0.894 - - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
81. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 1.684 - - - - - 0.799 0.885 - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
82. pcdh2ac ENSDARG00000099783 325 1.684 - - - - - 0.864 0.820 - - protocadherin 2 alpha c [Source:ZFIN;Acc:ZDB-GENE-041118-12]
83. slc18a3a ENSDARG00000006356 1285 1.678 - - - - - 0.707 0.971 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
84. cacng8b ENSDARG00000070626 176 1.678 - - - - - 0.706 0.972 - - calcium channel, voltage-dependent, gamma subunit 8b [Source:ZFIN;Acc:ZDB-GENE-100921-72]
85. CABZ01061873.1 CABZ01061873.1 51 1.677 - - - - - 0.847 0.830 - -
86. vsnl1b ENSDARG00000044053 1120 1.676 - - - - - 0.740 0.936 - - visinin-like 1b [Source:ZFIN;Acc:ZDB-GENE-080225-39]
87. si:dkey-266f7.10 ENSDARG00000086613 7 1.675 - - - - - 0.847 0.828 - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
88. BX248582.3 BX248582.3 3 1.675 - - - - - 0.847 0.828 - -
89. rab11bb_1 ENSDARG00000090086 7 1.675 - - - - - 0.847 0.828 - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
90. TENM2 ENSDARG00000037122 48 1.675 - - - - - 0.847 0.828 - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
91. rbfox3l rbfox3l 34 1.675 - - - - - 0.847 0.828 - -
92. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 1.674 - - - - - 0.846 0.828 - - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
93. cntnap5b ENSDARG00000075189 16 1.674 - - - - - 0.846 0.828 - - contactin associated protein-like 5b [Source:ZFIN;Acc:ZDB-GENE-070705-209]
94. opcml ENSDARG00000013005 18 1.674 - - - - - 0.846 0.828 - - opioid binding protein/cell adhesion molecule-like [Source:ZFIN;Acc:ZDB-GENE-040927-3]
95. nova2 ENSDARG00000017673 7685 1.67 - - - - - 0.720 0.950 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
96. magi1a ENSDARG00000070145 547 1.668 0.760 - - - - - 0.908 - - membrane associated guanylate kinase, WW and PDZ domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-081105-13]
97. rpp30 ENSDARG00000027428 286 1.664 0.876 0.788 - - - - - - - ribonuclease P/MRP 30 subunit [Source:ZFIN;Acc:ZDB-GENE-050320-45]
98. CR848045.1 CR848045.1 459 1.664 - - - - - 0.729 0.935 - -
99. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 1.661 - - - - - 0.801 0.860 - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
100. cspg5a ENSDARG00000069981 1699 1.659 - - - - - 0.719 0.940 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]

There are 1977 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA