Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nedd8

Gene Name Gene ID Reads Annotation
nedd8 ENSDARG00000007989 3896 neural precursor cell expressed, developmentally down-regulated 8 [Source:ZFIN;Acc:ZDB-GENE-030616-588]










Genes with expression patterns similar to nedd8

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nedd8 ENSDARG00000007989 3896 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 neural precursor cell expressed, developmentally down-regulated 8 [Source:ZFIN;Acc:ZDB-GENE-030616-588]
2. MALSU1 MALSU1 1251 2.51 - - 0.898 - - - 0.707 - 0.905
3. cyth1a ENSDARG00000005159, ENSDARG00000076742 2796 2.415 - - - - - 0.804 - 0.708 0.903 cytohesin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-657]
4. ctdsp2 ENSDARG00000036102, ENSDARG00000110420 4625 2.4 - - - - - 0.731 0.780 - 0.889 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-184]
5. laptm4a ENSDARG00000006397 1698 2.395 - 0.774 0.898 - - 0.723 - - - lysosomal protein transmembrane 4 alpha [Source:ZFIN;Acc:ZDB-GENE-030131-1024]
6. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 2.382 - 0.754 - - - 0.718 - - 0.910 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
7. arcn1b ENSDARG00000031214 4529 2.335 - - 0.889 - - 0.704 0.742 - - archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7]
8. helz ENSDARG00000030560 3259 2.317 - - - - - - 0.741 0.823 0.753 helicase with zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-2419]
9. fryl ENSDARG00000040001 3256 2.317 - 0.716 0.898 - - 0.703 - - - furry homolog, like [Source:ZFIN;Acc:ZDB-GENE-040914-58]
10. mgst3 mgst3 3982 2.312 - 0.763 - - - - 0.833 0.716 -
11. wsb1 ENSDARG00000021343 3828 2.297 0.707 - - - - - 0.756 - 0.834 WD repeat and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1946]
12. psmb6 ENSDARG00000002240 8015 2.272 - 0.773 0.728 - - 0.771 - - - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
13. elof1 ENSDARG00000099453 6176 2.257 0.728 0.782 - - - - 0.747 - - ELF1 homolog, elongation factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1385]
14. nrm ENSDARG00000063690 1371 2.178 - 0.714 - - - 0.758 0.706 - - nurim [Source:ZFIN;Acc:ZDB-GENE-060503-445]
15. OTTDARG00000032278 OTTDARG00000032278 1016 1.765 - 0.872 - - - - - - 0.893
16. faub ENSDARG00000043663, ENSDARG00000111416, ENSDARG00000113054 1451 1.759 - 0.864 0.895 - - - - - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b [Source:ZFIN;Acc:ZDB-GENE-050417-416]
17. timp2a ENSDARG00000061226, ENSDARG00000114336 1756 1.739 - - 0.989 - - - - - 0.750 TIMP metallopeptidase inhibitor 2a [Source:ZFIN;Acc:ZDB-GENE-030612-1]
18. TRIM35_10 TRIM35_10 484 1.737 - 0.838 0.899 - - - - - -
19. crk ENSDARG00000055635, ENSDARG00000109497, ENSDARG00000115801 5105 1.733 - - 0.864 - - - - - 0.869 v-crk avian sarcoma virus CT10 oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040801-148]
20. sppl2 ENSDARG00000030448 1040 1.723 - 0.801 - - - - - - 0.922 signal peptide peptidase-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4265]
21. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 1.708 - - 0.849 - - - 0.859 - - stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
22. adam10a ENSDARG00000053468 9308 1.706 - 0.881 - - - - 0.825 - - ADAM metallopeptidase domain 10a [Source:ZFIN;Acc:ZDB-GENE-040917-2]
23. cxcr4a ENSDARG00000057633 1829 1.705 - - 0.896 - - - - - 0.809 chemokine (C-X-C motif) receptor 4a [Source:ZFIN;Acc:ZDB-GENE-020102-1]
24. insig1 ENSDARG00000010658, ENSDARG00000113413 1811 1.705 - 0.778 - - - - - - 0.927 insulin induced gene 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6121]
25. eif2s3 ENSDARG00000008292 17051 1.7 0.757 - 0.943 - - - - - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
26. ppm1bb ENSDARG00000011496 10196 1.696 - - - - - 0.767 - - 0.929 protein phosphatase, Mg2+/Mn2+ dependent, 1Bb [Source:ZFIN;Acc:ZDB-GENE-041114-185]
27. mrpl14 ENSDARG00000068886 1991 1.694 - - - - - 0.758 - - 0.936 mitochondrial ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-040426-1066]
28. erf ENSDARG00000063417 1053 1.694 - 0.781 - - - - - - 0.913 Ets2 repressor factor [Source:ZFIN;Acc:ZDB-GENE-010724-17]
29. CACUL1 ENSDARG00000021885 691 1.693 - - - - - 0.774 - - 0.919 CDK2 associated cullin domain 1 [Source:ZFIN;Acc:ZDB-GENE-170113-2]
30. ppp1r14bb ENSDARG00000030161 2349 1.687 - 0.796 0.891 - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Bb [Source:ZFIN;Acc:ZDB-GENE-030616-595]
31. siah1 ENSDARG00000030871 1590 1.685 - 0.868 - - - 0.817 - - - siah E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-010319-31]
32. stk10 ENSDARG00000101894 1587 1.677 - 0.754 - - - - - - 0.923 serine/threonine kinase 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1136]
33. mpv17 ENSDARG00000032431 1225 1.675 - 0.751 - - - - - - 0.924 MpV17 mitochondrial inner membrane protein [Source:ZFIN;Acc:ZDB-GENE-040426-1168]
34. golgb1 ENSDARG00000061951 2023 1.67 - - - - - - - 0.746 0.924 golgin B1 [Source:ZFIN;Acc:ZDB-GENE-030429-9]
35. FBXO33 ENSDARG00000075400 1164 1.669 - 0.739 - - - - - - 0.930 F-box protein 33 [Source:ZFIN;Acc:ZDB-GENE-100618-2]
36. CPAMD8 ENSDARG00000056530 3481 1.668 - 0.776 - - - - - - 0.892 C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
37. tmem238 tmem238 1403 1.663 - 0.870 - - - 0.793 - - -
38. cops2 ENSDARG00000004785 4911 1.656 - - - - - - 0.784 - 0.872 COP9 signalosome subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-15]
39. elovl7a ENSDARG00000069279, ENSDARG00000114975 1963 1.654 - 0.762 - - - - - - 0.892 ELOVL fatty acid elongase 7a [Source:ZFIN;Acc:ZDB-GENE-030131-6149]
40. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 1.649 - 0.933 - - - - 0.716 - - ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
41. mrpl15 ENSDARG00000101306 2796 1.645 - - 0.891 - - - 0.754 - - mitochondrial ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-168]
42. gstm gstm 4064 1.642 - - - - - 0.772 - - 0.870
43. cebpg ENSDARG00000036073 3791 1.639 - - 0.891 - - 0.748 - - - CCAAT enhancer binding protein gamma [Source:ZFIN;Acc:ZDB-GENE-020111-5]
44. XPR1 XPR1 3354 1.638 - 0.728 - - - - - - 0.910
45. tmem258 ENSDARG00000078785 9578 1.636 - - - - - - 0.779 - 0.857 transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
46. vps28 ENSDARG00000103203 4991 1.635 - 0.711 - - - - - - 0.924 vacuolar protein sorting 28 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1527]
47. pgd ENSDARG00000015343, ENSDARG00000117150 2512 1.634 - 0.876 - - - - 0.758 - - phosphogluconate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2807]
48. eppk1 ENSDARG00000096359 4315 1.629 - - 0.888 - - 0.741 - - - epiplakin 1 [Source:ZFIN;Acc:ZDB-GENE-030416-1]
49. lsm14aa ENSDARG00000006600 2298 1.628 - - 0.894 - - 0.734 - - - LSM14A mRNA processing body assembly factor a [Source:ZFIN;Acc:ZDB-GENE-040426-1567]
50. cldnb ENSDARG00000009544 6036 1.623 - - - - - 0.742 - - 0.881 claudin b [Source:ZFIN;Acc:ZDB-GENE-010328-2]
51. pnp5a ENSDARG00000078619 1461 1.621 - - - - - 0.748 - - 0.873 purine nucleoside phosphorylase 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2553]
52. mfn1b ENSDARG00000079219 1699 1.618 - - - - - - - 0.716 0.902 mitofusin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1553]
53. SIK1 ENSDARG00000058606 1982 1.617 - - 0.896 - - 0.721 - - - salt-inducible kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9446]
54. atp2a3 ENSDARG00000060978 1408 1.615 - - - - - - - 0.712 0.903 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [Source:ZFIN;Acc:ZDB-GENE-060531-103]
55. myeov2 3351 1.615 - - - - - 0.823 0.792 - - myeloma overexpressed 2
56. tmem47 ENSDARG00000057322 4691 1.614 0.725 - 0.889 - - - - - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
57. chtopa ENSDARG00000057234 3287 1.61 - - - - - 0.750 - - 0.860 chromatin target of PRMT1a [Source:ZFIN;Acc:ZDB-GENE-030131-210]
58. mrps18b ENSDARG00000007065 2121 1.607 - - 0.893 - - - - 0.714 - mitochondrial ribosomal protein S18B [Source:ZFIN;Acc:ZDB-GENE-050417-278]
59. GIT1 ENSDARG00000039489 1157 1.607 - 0.829 - - - - 0.778 - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-100408-5]
60. stxbp2 ENSDARG00000007603 1646 1.606 - - - - - 0.700 - - 0.906 syntaxin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2482]
61. vimp 4034 1.599 - - - - - 0.789 0.810 - - VCP-interacting membrane selenoprotein
62. tmed7 ENSDARG00000046022 2435 1.597 - 0.776 - - - - 0.821 - - transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
63. mrps18a ENSDARG00000024465 5187 1.595 0.716 - 0.879 - - - - - - mitochondrial ribosomal protein S18A [Source:ZFIN;Acc:ZDB-GENE-041210-109]
64. gtf2f2a ENSDARG00000069910 1027 1.589 - 0.780 - - - 0.809 - - - general transcription factor IIF, polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-040625-131]
65. ppp4r2b ENSDARG00000053447 2506 1.588 - - - - - - 0.718 - 0.870 protein phosphatase 4, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3008]
66. ZNF281 ZNF281 1946 1.586 - 0.837 - - - - - - 0.749
67. ywhae2 ENSDARG00000017014 5105 1.586 - 0.843 - - - 0.743 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050306-44]
68. psmd7 ENSDARG00000102417 4732 1.586 0.759 - - - - 0.827 - - - proteasome 26S subunit, non-ATPase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5541]
69. sort1b ENSDARG00000056252 2652 1.584 - - - - - - 0.714 - 0.870 sortilin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7447]
70. ncoa5 ENSDARG00000016345 5765 1.565 - - 0.802 - - - 0.763 - - nuclear receptor coactivator 5 [Source:ZFIN;Acc:ZDB-GENE-040912-155]
71. ap3d1 ENSDARG00000071424, ENSDARG00000114974 5373 1.565 - - 0.862 - - - 0.703 - - adaptor related protein complex 3 subunit delta 1 [Source:ZFIN;Acc:ZDB-GENE-050208-437]
72. TNPO2 ENSDARG00000042887 2290 1.564 - 0.786 - - - - - 0.778 - transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
73. rpl23a ENSDARG00000006316 59831 1.563 0.708 - 0.855 - - - - - - ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
74. pafah1b3 ENSDARG00000058047, ENSDARG00000105336, ENSDARG00000116495 8019 1.562 - - 0.790 - - - 0.772 - - platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1026]
75. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.549 - 0.796 - - - - 0.753 - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
76. C19H18orf21_1 C19H18orf21_1 1657 1.549 0.746 - - - - - 0.803 - -
77. tmem167a ENSDARG00000035914 3319 1.547 - - - - - - 0.757 - 0.790 transmembrane protein 167A [Source:ZFIN;Acc:ZDB-GENE-050320-29]
78. fkbp3 ENSDARG00000098059 5428 1.545 - - - - - 0.724 0.821 - - FK506 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-419]
79. bcar1 ENSDARG00000056525 6563 1.544 - - - - - 0.810 0.734 - - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
80. sypl2a ENSDARG00000055307, ENSDARG00000115972 7103 1.542 - - - - - 0.725 0.817 - - synaptophysin-like 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1434]
81. map3k7 ENSDARG00000020469 2845 1.54 - 0.730 - - - - 0.810 - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
82. flot2a ENSDARG00000004830 5276 1.537 - - - - - - 0.701 - 0.836 flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
83. vta1 ENSDARG00000013732 6072 1.535 - - - - - 0.778 0.757 - - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
84. nucks1b ENSDARG00000012777 4468 1.533 - - - - 0.736 - 0.797 - - nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
85. si:ch211-120p12.3 1079 1.532 - 0.802 - - - - - 0.730 - si:ch211-120p12.3, transcript variant X2
86. vdac1 ENSDARG00000045132 8051 1.532 0.709 0.823 - - - - - - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
87. znf346 ENSDARG00000060695 3942 1.531 0.787 - - - - - 0.744 - - zinc finger protein 346 [Source:ZFIN;Acc:ZDB-GENE-070209-152]
88. sec61b ENSDARG00000076568 11859 1.529 - - - - - - 0.732 - 0.797 Sec61 translocon beta subunit [Source:ZFIN;Acc:ZDB-GENE-040718-260]
89. anapc16 ENSDARG00000013822 5857 1.526 - - - - - 0.700 0.826 - - anaphase promoting complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-050417-430]
90. si:dkey-27i16.3 si:dkey-27i16.3 494 1.522 - 0.811 - - - 0.711 - - -
91. ncoa4 ENSDARG00000021439 4581 1.519 - 0.819 - - - - 0.700 - - nuclear receptor coactivator 4 [Source:ZFIN;Acc:ZDB-GENE-040426-689]
92. lypla2 ENSDARG00000053656 8971 1.517 - - - 0.752 - - 0.765 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
93. sarnp ENSDARG00000059357 4768 1.516 0.736 - - - - - 0.780 - - SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
94. yipf6 ENSDARG00000054433, ENSDARG00000116553 3052 1.509 - - - - - 0.786 0.723 - - Yip1 domain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-040625-76]
95. me3 ENSDARG00000002305 3305 1.508 - - - - - 0.760 0.748 - - malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-041111-294]
96. efna1a ENSDARG00000030326 1692 1.506 - - - - - 0.769 0.737 - - ephrin-A1a [Source:ZFIN;Acc:ZDB-GENE-040426-1135]
97. brd4 ENSDARG00000078904 5367 1.504 - - - - - 0.721 0.783 - - bromodomain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-267]
98. tmem147 ENSDARG00000039913 3209 1.504 0.777 - - - - - 0.727 - - transmembrane protein 147 [Source:ZFIN;Acc:ZDB-GENE-040718-187]
99. sf3b1 ENSDARG00000056138 5785 1.503 - - 0.777 - - - 0.726 - - splicing factor 3b, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040827-3]
100. wif1 ENSDARG00000005541 1689 1.503 - 0.769 - - - - 0.734 - - wnt inhibitory factor 1 [Source:ZFIN;Acc:ZDB-GENE-990712-17]

There are 1528 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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