Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for msrb1b

Gene Name Gene ID Reads Annotation
msrb1b ENSDARG00000045160, ENSDARG00000062442, ENSDARG00000115408 1682 methionine sulfoxide reductase B1b [Source:ZFIN;Acc:ZDB-GENE-040912-88]










Genes with expression patterns similar to msrb1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. msrb1b ENSDARG00000045160, ENSDARG00000062442, ENSDARG00000115408 1682 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 methionine sulfoxide reductase B1b [Source:ZFIN;Acc:ZDB-GENE-040912-88]
2. ankrd13a ENSDARG00000061901 1192 1.763 - - - - - 0.996 0.767 - - ankyrin repeat domain 13A [Source:ZFIN;Acc:ZDB-GENE-030131-1833]
3. mphosph8 ENSDARG00000005576, ENSDARG00000114033 5350 1.755 - - - - - 0.986 0.769 - - M-phase phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-050309-191]
4. PPAP2A PPAP2A 2409 1.745 - 0.749 - - - 0.996 - - -
5. KDM6B KDM6B 10265 1.688 - - - - - 0.912 0.776 - -
6. arpc2 ENSDARG00000075989 22423 1.543 - 0.736 - - - 0.807 - - - actin related protein 2/3 complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5276]
7. bet1l ENSDARG00000032037 1477 1.505 - 0.799 - 0.706 - - - - - Bet1 golgi vesicular membrane trafficking protein-like [Source:ZFIN;Acc:ZDB-GENE-040822-2]
8. foxa3 ENSDARG00000012788 405 1.501 - 0.755 - - - - 0.746 - - forkhead box A3 [Source:ZFIN;Acc:ZDB-GENE-980526-423]
9. rhpn2 ENSDARG00000014577 2537 1.488 - 0.709 - - - - 0.779 - - rhophilin, Rho GTPase binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9927]
10. pias2 ENSDARG00000092979, ENSDARG00000115060 2317 1.479 - 0.750 - - - - 0.729 - - protein inhibitor of activated STAT, 2 [Source:ZFIN;Acc:ZDB-GENE-060424-1]
11. ptenb ENSDARG00000056623 5783 1.477 - 0.722 - - - - 0.755 - - phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
12. mafbb ENSDARG00000070542, ENSDARG00000099120 1317 1.474 0.770 0.704 - - - - - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Bb [Source:ZFIN;Acc:ZDB-GENE-010605-4]
13. arpc1a ENSDARG00000008383 7353 1.474 - 0.731 - - - - 0.743 - - actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1]
14. waslb ENSDARG00000006283 2160 1.467 - 0.719 - - - - 0.748 - - Wiskott-Aldrich syndrome-like b [Source:ZFIN;Acc:ZDB-GENE-040426-718]
15. tmem222a ENSDARG00000069589 1766 1.465 - - - 0.701 - - 0.764 - - transmembrane protein 222a [Source:ZFIN;Acc:ZDB-GENE-050306-17]
16. ireb2 ENSDARG00000021466 699 1.455 - - - 0.719 - - 0.736 - - iron-responsive element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-051205-1]
17. BX897684.1 BX897684.1 636 0.999 - - - - - 0.999 - - -
18. CCDC86 CCDC86 2023 0.999 - - - - - 0.999 - - -
19. si:dkey-17e16.17 615 0.999 - - - - - 0.999 - - - si:dkey-17e16.17
20. ccnd2a ENSDARG00000051748 2506 0.999 - - - - - 0.999 - - - cyclin D2, a [Source:ZFIN;Acc:ZDB-GENE-070424-30]
21. gnrh3 ENSDARG00000056214, ENSDARG00000112890 226 0.997 - - - - - 0.997 - - - gonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
22. cbsa ENSDARG00000053500, ENSDARG00000112676 792 0.997 - - - - - 0.997 - - - cystathionine-beta-synthase a [Source:ZFIN;Acc:ZDB-GENE-050417-367]
23. si:dkeyp-73a2.2 ENSDARG00000079785 313 0.997 - - - - - 0.997 - - - si:dkeyp-73a2.2 [Source:NCBI gene;Acc:100307112]
24. tmem183a ENSDARG00000044899 491 0.997 - - - - - 0.997 - - - transmembrane protein 183A [Source:ZFIN;Acc:ZDB-GENE-050327-5]
25. txndc11 ENSDARG00000101291 589 0.997 - - - - - 0.997 - - - thioredoxin domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-041008-112]
26. zgc:112148 ENSDARG00000001804 386 0.997 - - - - - 0.997 - - - zgc:112148 [Source:ZFIN;Acc:ZDB-GENE-050417-235]
27. farsa ENSDARG00000098825 2813 0.997 - - - - - 0.997 - - - phenylalanyl-tRNA synthetase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-050512-2]
28. gbx1 ENSDARG00000071418 871 0.997 - - - - - 0.997 - - - gastrulation brain homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-020117-2]
29. pax5 ENSDARG00000037383 319 0.997 - - - - - 0.997 - - - paired box 5 [Source:ZFIN;Acc:ZDB-GENE-001030-2]
30. si:dkeyp-19e1.3 ENSDARG00000051836 531 0.997 - - - - - 0.997 - - - si:dkeyp-19e1.3 [Source:ZFIN;Acc:ZDB-GENE-081104-56]
31. l2hgdh ENSDARG00000060500 713 0.997 - - - - - 0.997 - - - L-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-090319-6]
32. socs3a ENSDARG00000025428 349 0.997 - - - - - 0.997 - - - suppressor of cytokine signaling 3a [Source:ZFIN;Acc:ZDB-GENE-030131-7349]
33. si:ch211-138k19.2 si:ch211-138k19.2 398 0.997 - - - - - 0.997 - - -
34. ube2z ENSDARG00000029215 1059 0.997 - - - - - 0.997 - - - ubiquitin-conjugating enzyme E2Z [Source:ZFIN;Acc:ZDB-GENE-040718-15]
35. fam84b ENSDARG00000032859, ENSDARG00000116831 386 0.997 - - - - - 0.997 - - - family with sequence similarity 84, member B [Source:ZFIN;Acc:ZDB-GENE-060929-1130]
36. tp53 ENSDARG00000035559, ENSDARG00000115148 4362 0.997 - - - - - 0.997 - - - tumor protein p53 [Source:ZFIN;Acc:ZDB-GENE-990415-270]
37. gmds ENSDARG00000026629 3976 0.997 - - - - - 0.997 - - - GDP-mannose 4,6-dehydratase [Source:ZFIN;Acc:ZDB-GENE-050419-45]
38. CU929219.1 CU929219.1 383 0.997 - - - - - 0.997 - - -
39. acaa1 ENSDARG00000004687 557 0.997 - - - - - 0.997 - - - acetyl-CoA acyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-48]
40. CZv9_NA991H1orf52 CZv9_NA991H1orf52 1723 0.997 - - - - - 0.997 - - -
41. mea1 ENSDARG00000039820 589 0.997 - - - - - 0.997 - - - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
42. cdk13 ENSDARG00000076791 828 0.997 - - - - - 0.997 - - - cyclin-dependent kinase 13 [Source:ZFIN;Acc:ZDB-GENE-030131-4975]
43. HOMER2 ENSDARG00000059349 2264 0.997 - - - - - 0.997 - - - homer scaffold protein 2 [Source:ZFIN;Acc:ZDB-GENE-050522-417]
44. gsr ENSDARG00000019236, ENSDARG00000114106 1149 0.996 - - - - - 0.996 - - - glutathione reductase [Source:ZFIN;Acc:ZDB-GENE-050522-116]
45. rnf183 ENSDARG00000068851 2427 0.996 - - - - - 0.996 - - - ring finger protein 183 [Source:ZFIN;Acc:ZDB-GENE-060929-1090]
46. b4galt1 ENSDARG00000002634 1076 0.996 - - - - - 0.996 - - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050417-236]
47. rxrbb ENSDARG00000002006, ENSDARG00000117079 1975 0.996 - - - - - 0.996 - - - retinoid x receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-990415-242]
48. her9 ENSDARG00000056438, ENSDARG00000115775 3099 0.996 - - - - - 0.996 - - - hairy-related 9 [Source:ZFIN;Acc:ZDB-GENE-011213-1]
49. cab39 ENSDARG00000043451 1326 0.996 - - - - - 0.996 - - - calcium binding protein 39 [Source:ZFIN;Acc:ZDB-GENE-040625-158]
50. csrp1a ENSDARG00000006603 5188 0.996 - - - - - 0.996 - - - cysteine and glycine-rich protein 1a [Source:ZFIN;Acc:ZDB-GENE-030909-4]
51. evla ENSDARG00000035650 854 0.996 - - - - - 0.996 - - - Enah/Vasp-like a [Source:ZFIN;Acc:ZDB-GENE-000607-65]
52. grip1 ENSDARG00000015053 1275 0.996 - - - - - 0.996 - - - glutamate receptor interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-041210-125]
53. sptlc2b ENSDARG00000074287 1853 0.996 - - - - - 0.996 - - - serine palmitoyltransferase, long chain base subunit 2b [Source:ZFIN;Acc:ZDB-GENE-080305-8]
54. mbtps1 ENSDARG00000014634, ENSDARG00000109507, ENSDARG00000110774 2290 0.996 - - - - - 0.996 - - - membrane-bound transcription factor peptidase, site 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4909]
55. efemp2a ENSDARG00000094324 39261 0.996 - - - - - 0.996 - - - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
56. PLCL2 ENSDARG00000098826 596 0.996 - - - - - 0.996 - - - phospholipase C like 2 [Source:ZFIN;Acc:ZDB-GENE-120426-4]
57. usp36 ENSDARG00000032327 1884 0.996 - - - - - 0.996 - - - ubiquitin specific peptidase 36 [Source:ZFIN;Acc:ZDB-GENE-030131-5450]
58. trappc5 ENSDARG00000026068 1350 0.996 - - - - - 0.996 - - - trafficking protein particle complex 5 [Source:ZFIN;Acc:ZDB-GENE-040718-185]
59. plekhh1 ENSDARG00000053835 2123 0.996 - - - - - 0.996 - - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
60. GIGYF1 1830 0.995 - - - - - 0.995 - - - GRB10 interacting GYF protein 1, transcript variant X6
61. ifi30 ENSDARG00000056378, ENSDARG00000112359 2472 0.995 - - - - - 0.995 - - - interferon, gamma-inducible protein 30 [Source:ZFIN;Acc:ZDB-GENE-030131-8447]
62. ddx6 ENSDARG00000061338 2514 0.995 - - - - - 0.995 - - - DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:ZFIN;Acc:ZDB-GENE-070912-83]
63. irx3a ENSDARG00000101076 3106 0.995 - - - - - 0.995 - - - iroquois homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-991119-5]
64. MRPL52 ENSDARG00000090568 4402 0.995 - - - - - 0.995 - - - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
65. PIK3CA_1 PIK3CA_1 4065 0.995 - - - - - 0.995 - - -
66. gdpd3a ENSDARG00000074466 1739 0.995 - - - - - 0.995 - - - glycerophosphodiester phosphodiesterase domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2279]
67. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 0.995 - - - - - 0.995 - - - stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
68. vamp5 ENSDARG00000068262 2413 0.995 - - - - - 0.995 - - - vesicle-associated membrane protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4209]
69. insra ENSDARG00000011948 1258 0.995 - - - - - 0.995 - - - insulin receptor a [Source:ZFIN;Acc:ZDB-GENE-020503-3]
70. rorca ENSDARG00000057231, ENSDARG00000111082 894 0.995 - - - - - 0.995 - - - RAR-related orphan receptor C a [Source:ZFIN;Acc:ZDB-GENE-990415-250]
71. ppp2r5eb ENSDARG00000069118 1902 0.995 - - - - - 0.995 - - - protein phosphatase 2, regulatory subunit B', epsilon isoform b [Source:ZFIN;Acc:ZDB-GENE-030904-6]
72. Sep-06 Sep-06 5465 0.995 - - - - - 0.995 - - -
73. cpz ENSDARG00000075521 2356 0.995 - - - - - 0.995 - - - carboxypeptidase Z [Source:ZFIN;Acc:ZDB-GENE-090313-267]
74. acvr1b acvr1b 2963 0.994 - - - - - 0.994 - - -
75. zgc:195001 ENSDARG00000070484 3281 0.994 - - - - - 0.994 - - - zgc:195001 [Source:ZFIN;Acc:ZDB-GENE-081022-173]
76. dctn3 ENSDARG00000041363 3351 0.994 - - - - - 0.994 - - - dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
77. stra6 ENSDARG00000051874, ENSDARG00000115031 1625 0.994 - - - - - 0.994 - - - stimulated by retinoic acid 6 [Source:ZFIN;Acc:ZDB-GENE-060616-252]
78. pafah1b1a ENSDARG00000032013 3183 0.994 - - - - - 0.994 - - - platelet-activating factor acetylhydrolase 1b, regulatory subunit 1a [Source:ZFIN;Acc:ZDB-GENE-040116-2]
79. PCBP4 ENSDARG00000024276 3194 0.994 - - - - - 0.994 - - - poly(rC) binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2122]
80. si:ch211-114n24.7 si:ch211-114n24.7 2544 0.993 - - - - - 0.993 - - -
81. CDS1 ENSDARG00000019549 1659 0.993 - - - - - 0.993 - - - CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1 [Source:ZFIN;Acc:ZDB-GENE-070705-78]
82. fbxw5 ENSDARG00000099139 2802 0.993 - - - - - 0.993 - - - F-box and WD repeat domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2571]
83. tmem106bb ENSDARG00000035949, ENSDARG00000113700 1415 0.993 - - - - - 0.993 - - - transmembrane protein 106Bb [Source:ZFIN;Acc:ZDB-GENE-050913-37]
84. slc25a12 ENSDARG00000102362 2773 0.993 - - - - - 0.993 - - - solute carrier family 25 (aspartate/glutamate carrier), member 12 [Source:ZFIN;Acc:ZDB-GENE-031006-11]
85. clvs2 ENSDARG00000053122 1390 0.993 - - - - - 0.993 - - - clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
86. slc2a3a ENSDARG00000013295 2449 0.992 - - - - - 0.992 - - - solute carrier family 2 (facilitated glucose transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-040718-390]
87. cdc42l ENSDARG00000040158, ENSDARG00000116748 11671 0.992 - - - - - 0.992 - - - cell division cycle 42, like [Source:ZFIN;Acc:ZDB-GENE-030131-6069]
88. slc4a1a ENSDARG00000012881 8972 0.992 - - - - - 0.992 - - - solute carrier family 4 (anion exchanger), member 1a (Diego blood group) [Source:ZFIN;Acc:ZDB-GENE-010525-1]
89. kera ENSDARG00000056938 2434 0.992 - - - - - 0.992 - - - keratocan [Source:ZFIN;Acc:ZDB-GENE-041210-165]
90. atp1a1a.1 ENSDARG00000002791 7392 0.991 - - - - - 0.991 - - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-001212-1]
91. trappc1 ENSDARG00000039005 6990 0.991 - - - - - 0.991 - - - trafficking protein particle complex 1 [Source:ZFIN;Acc:ZDB-GENE-040718-242]
92. ctnnd1 ENSDARG00000078233 2520 0.991 - - - - - 0.991 - - - catenin (cadherin-associated protein), delta 1 [Source:ZFIN;Acc:ZDB-GENE-110208-9]
93. selt2 12741 0.991 - - - - - 0.991 - - - selenoprotein T, 2
94. gys1 ENSDARG00000016875 2037 0.99 - - - - - 0.990 - - - glycogen synthase 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1243]
95. psmc6 ENSDARG00000037038, ENSDARG00000111223, ENSDARG00000114650 25449 0.99 - - - - - 0.990 - - - proteasome 26S subunit, ATPase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-304]
96. grhl1 ENSDARG00000061391 1494 0.99 - - - - - 0.990 - - - grainyhead-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3665]
97. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 0.989 - - - - - 0.989 - - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
98. ppm1h ENSDARG00000063684 1446 0.989 - - - - - 0.989 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1H [Source:ZFIN;Acc:ZDB-GENE-061027-190]
99. psmb7 ENSDARG00000037962 11542 0.989 - - - - - 0.989 - - - proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
100. tuba1b ENSDARG00000045367 8485 0.989 - - - - - 0.989 - - - tubulin, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030822-1]

There are 487 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA