Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for msh6

Gene Name Gene ID Reads Annotation
msh6 ENSDARG00000104541 197 mutS homolog 6 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-020905-3]










Genes with expression patterns similar to msh6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. msh6 ENSDARG00000104541 197 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mutS homolog 6 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-020905-3]
2. zgc:174862 ENSDARG00000077571 201 1.734 0.734 - - - - 1.000 - - - zgc:174862 [Source:ZFIN;Acc:ZDB-GENE-080303-29]
3. pappab ENSDARG00000059858 11 1.703 - - - - - 1.000 0.703 - - pregnancy-associated plasma protein A, pappalysin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-71]
4. zgc:92275 ENSDARG00000034048 9 1.703 - - - - - 1.000 0.703 - - zgc:92275 [Source:ZFIN;Acc:ZDB-GENE-040718-356]
5. foxg1c ENSDARG00000068380, ENSDARG00000114414 25 1.605 0.774 - - - - - 0.831 - - forkhead box G1c [Source:ZFIN;Acc:ZDB-GENE-050419-26]
6. MYL4 ENSDARG00000011519 309 1.545 0.722 - - - - - 0.823 - - myosin, light chain 4, alkali; atrial, embryonic [Source:ZFIN;Acc:ZDB-GENE-050626-112]
7. ENSDARG00000090150 ENSDARG00000090150 966 1.534 - 0.807 - - - - 0.727 - -
8. RBPMS ENSDARG00000099396 61 1.509 0.740 - - - 0.769 - - - - RNA binding protein, mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-161017-145]
9. fam58a 423 1.5 0.762 0.738 - - - - - - - family with sequence similarity 58, member A, transcript variant X1
10. slc25a23b ENSDARG00000024708 51 1.488 - 0.702 - - - - 0.786 - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23b [Source:ZFIN;Acc:ZDB-GENE-040724-220]
11. si:dkey-30c15.9 si:dkey-30c15.9 4 1.477 0.774 - - - - - 0.703 - -
12. tmem59l ENSDARG00000003655 1536 1.463 0.703 0.760 - - - - - - - transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
13. KHDRBS3 ENSDARG00000101020 408 1.459 - - - - 0.733 - 0.726 - - KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117]
14. si:ch211-51h9.7 ENSDARG00000074720 227 1.446 - - - - 0.745 0.701 - - - si:ch211-51h9.7 [Source:ZFIN;Acc:ZDB-GENE-081104-235]
15. nrn1la ENSDARG00000069368, ENSDARG00000112044, ENSDARG00000112869 16 1.437 0.734 - - - - - 0.703 - - neuritin 1-like a [Source:NCBI gene;Acc:100004307]
16. tceanc2 ENSDARG00000062919 32 1.437 0.734 - - - - - 0.703 - - transcription elongation factor A (SII) N-terminal and central domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070705-486]
17. deptor ENSDARG00000040930 191 1.41 - 0.709 - - 0.701 - - - - DEP domain containing MTOR-interacting protein [Source:ZFIN;Acc:ZDB-GENE-061013-453]
18. LARP4 LARP4 48 1 - - - - - 1.000 - - -
19. abch1 ENSDARG00000071341 1 1 - - - - - 1.000 - - - ATP-binding cassette, sub-family H, member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-42]
20. CABZ01048021.1 CABZ01048021.1 15 1 - - - - - 1.000 - - -
21. TAF4_1 TAF4_1 30 1 - - - - - 1.000 - - -
22. PLXNB2_1 PLXNB2_1 10 1 - - - - - 1.000 - - -
23. FBXL21 FBXL21 6 1 - - - - - 1.000 - - -
24. cel.2 ENSDARG00000029822 0 1 - - - - - 1.000 - - - carboxyl ester lipase, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-061110-10]
25. ccr12.2 ccr12.2 2 1 - - - - - 1.000 - - -
26. crygn2 ENSDARG00000030411 2551 1 - - - - - 1.000 - - - crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
27. si:dkey-105f21.1 si:dkey-105f21.1 5 1 - - - - - 1.000 - - -
28. ribc1 ENSDARG00000055739 32 1 - - - - - 1.000 - - - RIB43A domain with coiled-coils 1 [Source:ZFIN;Acc:ZDB-GENE-081031-7]
29. QSOX2 ENSDARG00000077174 26 1 - - - - - 1.000 - - - quiescin Q6 sulfhydryl oxidase 2 [Source:ZFIN;Acc:ZDB-GENE-110203-4]
30. btr06 ENSDARG00000054184 1 1 - - - - - 1.000 - - - bloodthirsty-related gene family, member 6 [Source:ZFIN;Acc:ZDB-GENE-080516-2]
31. rspo4 ENSDARG00000038593 3 1 - - - - - 1.000 - - - R-spondin 4 [Source:ZFIN;Acc:ZDB-GENE-110103-2]
32. si:ch211-137i24.12 ENSDARG00000094537 35 1 - - - - - 1.000 - - - si:ch211-137i24.12 [Source:ZFIN;Acc:ZDB-GENE-060526-36]
33. ndr2 ENSDARG00000101279 2 1 - - - - - 1.000 - - - nodal-related 2 [Source:ZFIN;Acc:ZDB-GENE-990415-181]
34. BX682552.2_1 BX682552.2_1 37 1 - - - - - 1.000 - - -
35. BX511006.2 BX511006.2 29 1 - - - - - 1.000 - - -
36. palmdb ENSDARG00000034321 75 1 - - - - - 1.000 - - - palmdelphin b [Source:ZFIN;Acc:ZDB-GENE-090713-3]
37. CELA1_3 CELA1_3 0 1 - - - - - 1.000 - - -
38. dicp1.1 ENSDARG00000091993, ENSDARG00000111013, ENSDARG00000114814 2 1 - - - - - 1.000 - - - diverse immunoglobulin domain-containing protein 1.1 [Source:ZFIN;Acc:ZDB-GENE-120305-1]
39. crygm2d13 ENSDARG00000057460 1093 1 - - - - - 1.000 - - - crystallin, gamma M2d13 [Source:ZFIN;Acc:ZDB-GENE-040718-105]
40. cx55.5 13 1 - - - - - 1.000 - - - connexin 55.5, transcript variant X1
41. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 1 - - - - - 1.000 - - - cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
42. CU915778.1 ENSDARG00000099025 40 1 - - - - - 1.000 - - -
43. VSIG10L ENSDARG00000089237 12 1 - - - - - 1.000 - - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
44. AL954132.1 AL954132.1 1 1 - - - - - 1.000 - - -
45. CABZ01002768.1 ENSDARG00000098901 2 1 - - - - - 1.000 - - -
46. gcdhl gcdhl 38 1 - - - - - 1.000 - - -
47. si:dkey-39e8.5 si:dkey-39e8.5 2 1 - - - - - 1.000 - - -
48. si:ch211-169j7.3 si:ch211-169j7.3 4 1 - - - - - 1.000 - - -
49. entpd8 ENSDARG00000005565 18 1 - - - - - 1.000 - - - ectonucleoside triphosphate diphosphohydrolase 8 [Source:ZFIN;Acc:ZDB-GENE-040724-142]
50. si:ch211-223a10.3 si:ch211-223a10.3 3 1 - - - - - 1.000 - - -
51. si:dkey-79c1.1 ENSDARG00000093179 11 1 - - - - - 1.000 - - - si:dkey-79c1.1 [Source:ZFIN;Acc:ZDB-GENE-060531-153]
52. pdx1 ENSDARG00000002779, ENSDARG00000109275 28 1 - - - - - 1.000 - - - pancreatic and duodenal homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-122]
53. PIK3CA ENSDARG00000075456 39 1 - - - - - 1.000 - - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha [Source:ZFIN;Acc:ZDB-GENE-130409-1]
54. CU570987.1 CU570987.1 7 1 - - - - - 1.000 - - -
55. rnf217 ENSDARG00000060944 10 1 - - - - - 1.000 - - - ring finger protein 217 [Source:ZFIN;Acc:ZDB-GENE-060503-400]
56. CR354382.1 CR354382.1 42 1 - - - - - 1.000 - - -
57. FAM149A ENSDARG00000073709 7 1 - - - - - 1.000 - - - family with sequence similarity 149 member A [Source:ZFIN;Acc:ZDB-GENE-081107-36]
58. slc13a5 slc13a5 15 1 - - - - - 1.000 - - -
59. SQLE SQLE 1 1 - - - - - 1.000 - - -
60. si:dkey-34f16.9 si:dkey-34f16.9 1 1 - - - - - 1.000 - - -
61. plp1b ENSDARG00000011929 8 1 - - - - - 1.000 - - - proteolipid protein 1b [Source:ZFIN;Acc:ZDB-GENE-030710-6]
62. si:ch211-12e13.2 si:ch211-12e13.2 3 1 - - - - - 1.000 - - -
63. si:dkeyp-35f11.2 si:dkeyp-35f11.2 0 1 - - - - - 1.000 - - -
64. si:ch211-222b21.5 si:ch211-222b21.5 10 1 - - - - - 1.000 - - -
65. si:ch211-197e7.1 ENSDARG00000095200 1 1 - - - - - 1.000 - - - si:ch211-197e7.1 [Source:ZFIN;Acc:ZDB-GENE-081103-26]
66. CABZ01111604.1 CABZ01111604.1 140 1 - - - - - 1.000 - - -
67. si:dkey-30k22.10 2 1 - - - - - 1.000 - - - si:dkey-30k22.10
68. CR735107.4 CR735107.4 0 1 - - - - - 1.000 - - -
69. FLVCR2 FLVCR2 5 1 - - - - - 1.000 - - -
70. pnpla4 ENSDARG00000069834, ENSDARG00000110613 15 1 - - - - - 1.000 - - - patatin-like phospholipase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070410-74]
71. cep78 ENSDARG00000039229 1 1 - - - - - 1.000 - - - centrosomal protein 78 [Source:ZFIN;Acc:ZDB-GENE-070905-1]
72. gnal ENSDARG00000045415 164 1 - - - - - 1.000 - - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type [Source:ZFIN;Acc:ZDB-GENE-041114-26]
73. si:ch211-238e22.8 ENSDARG00000104804, ENSDARG00000105161 0 1 - - - - - 1.000 - - - si:ch211-238e22.8 [Source:ZFIN;Acc:ZDB-GENE-050419-231]
74. lrrc18b ENSDARG00000076236 5 1 - - - - - 1.000 - - - leucine rich repeat containing 18b [Source:ZFIN;Acc:ZDB-GENE-110315-1]
75. si:dkey-190j3.4 ENSDARG00000100743 1 1 - - - - - 1.000 - - - si:dkey-190j3.4 [Source:ZFIN;Acc:ZDB-GENE-070424-218]
76. CR354540.1 ENSDARG00000004051 10 1 - - - - - 1.000 - - - cytochrome P450, family 7, subfamily A, polypeptide 1b [Source:NCBI gene;Acc:559097]
77. si:dkey-228g21.5 si:dkey-228g21.5 1 1 - - - - - 1.000 - - -
78. srd5a2a ENSDARG00000043587 21 1 - - - - - 1.000 - - - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
79. CU633740.1 CU633740.1 8 1 - - - - - 1.000 - - -
80. lctla ENSDARG00000036139, ENSDARG00000116316 32 1 - - - - - 1.000 - - - lactase-like a [Source:ZFIN;Acc:ZDB-GENE-040718-233]
81. si:ch211-280c16.2 si:ch211-280c16.2 1 1 - - - - - 1.000 - - -
82. kif13bb ENSDARG00000073859 7 1 - - - - - 1.000 - - - kinesin family member 13Bb [Source:ZFIN;Acc:ZDB-GENE-090908-5]
83. pcdh2g12 5 1 - - - - - 1.000 - - - protocadherin 2 gamma 12
84. abl2 ENSDARG00000013841 145 1 - - - - - 1.000 - - - c-abl oncogene 2, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-020809-2]
85. si:dkeyp-75d2.5 si:dkeyp-75d2.5 21 1 - - - - - 1.000 - - -
86. gcgrb ENSDARG00000036272 54 1 - - - - - 1.000 - - - glucagon receptor b [Source:ZFIN;Acc:ZDB-GENE-050516-2]
87. U6_29 U6_29 0 1 - - - - - 1.000 - - -
88. diaph3 ENSDARG00000090785 16 1 - - - - - 1.000 - - - diaphanous-related formin 3 [Source:ZFIN;Acc:ZDB-GENE-040801-144]
89. SNORD89 SNORD89 1 1 - - - - - 1.000 - - -
90. si:ch211-207e19.15 ENSDARG00000113022 5 1 - - - - - 1.000 - - - si:ch211-207e19.15 [Source:ZFIN;Acc:ZDB-GENE-110914-27]
91. tyro3 ENSDARG00000005356 4 1 - - - - - 1.000 - - - TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
92. BX322612.1 BX322612.1 236 1 - - - - - 1.000 - - -
93. gpr65 ENSDARG00000045957 4 1 - - - - - 1.000 - - - G protein-coupled receptor 65 [Source:ZFIN;Acc:ZDB-GENE-120709-81]
94. si:ch73-83c10.2 si:ch73-83c10.2 22 1 - - - - - 1.000 - - -
95. BX927237.2 BX927237.2 16 1 - - - - - 1.000 - - -
96. si:busm1-180g5.7 si:busm1-180g5.7 15 1 - - - - - 1.000 - - -
97. olfch1 ENSDARG00000100026 3 1 - - - - - 1.000 - - - olfactory receptor C family, h1 [Source:ZFIN;Acc:ZDB-GENE-060503-819]
98. si:dkey-52l1.1 si:dkey-52l1.1 1 1 - - - - - 1.000 - - -
99. si:ch73-119o17.1 si:ch73-119o17.1 6 1 - - - - - 1.000 - - -
100. lrrcc1 ENSDARG00000078535 118 1 - - - - - 1.000 - - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-207]

There are 959 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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