Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mrpl39

Gene Name Gene ID Reads Annotation
mrpl39 ENSDARG00000041570 594 mitochondrial ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-030131-6520]










Genes with expression patterns similar to mrpl39

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mrpl39 ENSDARG00000041570 594 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 mitochondrial ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-030131-6520]
2. PARL 2511 1.601 - 0.793 - - - - 0.808 - - presenilin associated rhomboid like
3. hint3 ENSDARG00000074286 1015 1.569 - 0.833 - - - - 0.736 - - histidine triad nucleotide binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-100922-168]
4. akap6 ENSDARG00000077295 1382 1.51 - 0.770 - 0.740 - - - - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
5. BX323051.1 ENSDARG00000099065 1758 1.499 - 0.724 - - - 0.775 - - -
6. minal minal 383 1.464 - 0.747 - - - - 0.717 - -
7. mrpl28 ENSDARG00000057805, ENSDARG00000109307, ENSDARG00000115867 1325 0.907 - 0.907 - - - - - - - mitochondrial ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-050522-113]
8. ccdc12 ENSDARG00000023003, ENSDARG00000113770 1731 0.891 - 0.891 - - - - - - - coiled-coil domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-040801-108]
9. FRMD5_1 ENSDARG00000075942 883 0.884 - 0.884 - - - - - - - FERM domain containing 5 [Source:HGNC Symbol;Acc:HGNC:28214]
10. cep104 ENSDARG00000060361 303 0.875 - 0.875 - - - - - - - centrosomal protein 104 [Source:ZFIN;Acc:ZDB-GENE-060503-195]
11. tspan18a ENSDARG00000056656 530 0.872 - 0.872 - - - - - - - tetraspanin 18a [Source:ZFIN;Acc:ZDB-GENE-040718-232]
12. eif2b1 ENSDARG00000091402, ENSDARG00000114640 139 0.869 - 0.869 - - - - - - - eukaryotic translation initiation factor 2B, subunit 1 alpha [Source:ZFIN;Acc:ZDB-GENE-040625-25]
13. flrt3 ENSDARG00000076895 3516 0.86 - 0.860 - - - - - - - fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
14. garem ENSDARG00000017242 912 0.855 - 0.855 - - - - - - - GRB2 associated, regulator of MAPK1 [Source:ZFIN;Acc:ZDB-GENE-040426-767]
15. slc25a16 ENSDARG00000057287, ENSDARG00000109352 988 0.855 - 0.855 - - - - - - - solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16 [Source:ZFIN;Acc:ZDB-GENE-030131-3299]
16. C4H12orf5 C4H12orf5 158 0.843 - 0.843 - - - - - - -
17. TRIM63 TRIM63 1600 0.843 - 0.843 - - - - - - -
18. rnmt ENSDARG00000070553 1743 0.84 - 0.840 - - - - - - - RNA (guanine-7-) methyltransferase [Source:ZFIN;Acc:ZDB-GENE-041008-25]
19. tek ENSDARG00000028663 167 0.84 - 0.840 - - - - - - - TEK tyrosine kinase, endothelial [Source:ZFIN;Acc:ZDB-GENE-990415-56]
20. med4 ENSDARG00000041503 395 0.839 - - - - - 0.839 - - - mediator complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-050417-438]
21. cobl_1 ENSDARG00000091006 293 0.838 - - - - - - 0.838 - - cordon-bleu WH2 repeat protein [Source:ZFIN;Acc:ZDB-GENE-091020-11]
22. si:dkeyp-33b5.4 ENSDARG00000075057 185 0.837 - 0.837 - - - - - - - si:dkeyp-33b5.4 [Source:ZFIN;Acc:ZDB-GENE-100618-4]
23. alas2 ENSDARG00000038643, ENSDARG00000113125 4935 0.833 - 0.833 - - - - - - - aminolevulinate, delta-, synthase 2 [Source:ZFIN;Acc:ZDB-GENE-001229-1]
24. lrrc8a lrrc8a 674 0.83 - 0.830 - - - - - - -
25. galnt1 ENSDARG00000061335 1648 0.827 - 0.827 - - - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2360]
26. mesdc2 776 0.825 - 0.825 - - - - - - - mesoderm development candidate 2, transcript variant X2
27. cln6a ENSDARG00000077584 1090 0.825 - - - 0.825 - - - - - CLN6, transmembrane ER protein a [Source:ZFIN;Acc:ZDB-GENE-041010-57]
28. cwf19l1 ENSDARG00000002128 416 0.819 - 0.819 - - - - - - - CWF19-like 1, cell cycle control [Source:ZFIN;Acc:ZDB-GENE-031204-5]
29. ret ENSDARG00000055305 700 0.814 - - - 0.814 - - - - - ret proto-oncogene receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-980526-307]
30. ttll11 ENSDARG00000060374, ENSDARG00000113807 225 0.813 - 0.813 - - - - - - - tubulin tyrosine ligase-like family, member 11 [Source:ZFIN;Acc:ZDB-GENE-061013-747]
31. twistnb ENSDARG00000024416 1077 0.812 - - - - - - 0.812 - - TWIST neighbor [Source:ZFIN;Acc:ZDB-GENE-041007-3]
32. popdc3 ENSDARG00000058551 538 0.811 - 0.811 - - - - - - - popeye domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040624-10]
33. mrpl16 ENSDARG00000075325 592 0.811 - 0.811 - - - - - - - mitochondrial ribosomal protein L16 [Source:ZFIN;Acc:ZDB-GENE-041122-1]
34. snx8a ENSDARG00000074842 411 0.809 - - - - - - 0.809 - - sorting nexin 8a [Source:ZFIN;Acc:ZDB-GENE-031202-1]
35. tbrg4 ENSDARG00000074807 674 0.808 - - - - - - 0.808 - - transforming growth factor beta regulator 4 [Source:ZFIN;Acc:ZDB-GENE-091020-8]
36. arpp19a ENSDARG00000032532, ENSDARG00000109679 5102 0.807 - - - - - 0.807 - - - cAMP-regulated phosphoprotein 19a [Source:ZFIN;Acc:ZDB-GENE-040426-1281]
37. dicer1 ENSDARG00000001129, ENSDARG00000109655 1811 0.807 - 0.807 - - - - - - - dicer 1, ribonuclease type III [Source:ZFIN;Acc:ZDB-GENE-030131-3445]
38. cdkn2aipnl ENSDARG00000053395 5107 0.806 - 0.806 - - - - - - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
39. ublcp1 ENSDARG00000044492, ENSDARG00000111451 888 0.806 - 0.806 - - - - - - - ubiquitin-like domain containing CTD phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-3]
40. entpd5b ENSDARG00000093659 450 0.805 - 0.805 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 5b [Source:ZFIN;Acc:ZDB-GENE-091118-88]
41. iah1 ENSDARG00000015765 326 0.804 - - - 0.804 - - - - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-186]
42. sh3bp5b ENSDARG00000103978 513 0.802 - - - - - 0.802 - - - SH3-domain binding protein 5b (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-040426-2813]
43. wdr91 ENSDARG00000015153 388 0.802 - - - 0.802 - - - - - WD repeat domain 91 [Source:ZFIN;Acc:ZDB-GENE-050113-2]
44. C11H1orf158 C11H1orf158 133 0.801 - 0.801 - - - - - - -
45. cox7a1 ENSDARG00000069464, ENSDARG00000112682 243 0.8 - - - - - 0.800 - - - cytochrome c oxidase subunit 7A1 [Source:ZFIN;Acc:ZDB-GENE-060929-340]
46. kbtbd12 ENSDARG00000001882 1196 0.8 - 0.800 - - - - - - - kelch repeat and BTB (POZ) domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-050904-1]
47. diexf 520 0.8 - 0.800 - - - - - - - digestive organ expansion factor homolog
48. st5 ENSDARG00000037363, ENSDARG00000112276 1797 0.799 - 0.799 - - - - - - - suppression of tumorigenicity 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2547]
49. ptprua ENSDARG00000092638 479 0.799 - 0.799 - - - - - - - protein tyrosine phosphatase, receptor type, U, a [Source:ZFIN;Acc:ZDB-GENE-060503-232]
50. nras ENSDARG00000038225 450 0.798 - 0.798 - - - - - - - NRAS proto-oncogene, GTPase [Source:ZFIN;Acc:ZDB-GENE-990415-166]
51. atrnl1b ENSDARG00000006420 641 0.797 - 0.797 - - - - - - - attractin-like 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8092]
52. ubox5 ENSDARG00000058563 161 0.794 - - - - - 0.794 - - - U-box domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-110411-166]
53. ABCC1 ENSDARG00000104719 354 0.794 - - - - - 0.794 - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-15]
54. CR392006.1 CR392006.1 1401 0.794 - 0.794 - - - - - - -
55. CU633999.1 ENSDARG00000098197 2880 0.793 - 0.793 - - - - - - -
56. cant1b_1 ENSDARG00000102977 447 0.792 - - - 0.792 - - - - - calcium activated nucleotidase 1b [Source:ZFIN;Acc:ZDB-GENE-040801-114]
57. hoxc6b ENSDARG00000101954 967 0.792 - 0.792 - - - - - - - homeobox C6b [Source:ZFIN;Acc:ZDB-GENE-000822-1]
58. kdm4ab ENSDARG00000019103 521 0.792 - - - - - 0.792 - - - lysine (K)-specific demethylase 4A, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-030131-6279]
59. TATDN3 ENSDARG00000044072 914 0.791 - 0.791 - - - - - - - TatD DNase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27010]
60. DUSP27 ENSDARG00000099889 1197 0.791 - 0.791 - - - - - - - dual specificity phosphatase 27 [Source:ZFIN;Acc:ZDB-GENE-140513-1]
61. jph1a ENSDARG00000058603 2852 0.79 - 0.790 - - - - - - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
62. hdhd1 hdhd1 395 0.787 - - - - - 0.787 - - -
63. neurl1b ENSDARG00000099694 716 0.786 - 0.786 - - - - - - - neuralized E3 ubiquitin protein ligase 1B [Source:ZFIN;Acc:ZDB-GENE-050522-102]
64. nmt1b ENSDARG00000057206 654 0.785 - 0.785 - - - - - - - N-myristoyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-081222-3]
65. pim3 ENSDARG00000055129 1517 0.784 - 0.784 - - - - - - - Pim-3 proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050809-111]
66. papss1 ENSDARG00000057099 809 0.784 - 0.784 - - - - - - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-080721-5]
67. slc7a6os ENSDARG00000010596 1599 0.784 - - - 0.784 - - - - - solute carrier family 7, member 6 opposite strand [Source:ZFIN;Acc:ZDB-GENE-041114-32]
68. il12rb2l ENSDARG00000074850 407 0.784 - 0.784 - - - - - - - interleukin 12 receptor, beta 2a, like [Source:ZFIN;Acc:ZDB-GENE-080107-6]
69. pnpla6 ENSDARG00000010773 510 0.784 - - - - - 0.784 - - - patatin-like phospholipase domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050107-4]
70. pcm1 ENSDARG00000062198, ENSDARG00000112178 2912 0.784 - - - 0.784 - - - - - pericentriolar material 1 [Source:ZFIN;Acc:ZDB-GENE-030131-428]
71. rrp36 ENSDARG00000032516, ENSDARG00000109916 916 0.783 - 0.783 - - - - - - - ribosomal RNA processing 36 [Source:ZFIN;Acc:ZDB-GENE-030131-9751]
72. pld1a ENSDARG00000056228 765 0.782 - 0.782 - - - - - - - phospholipase D1a [Source:ZFIN;Acc:ZDB-GENE-031002-2]
73. mrps9 ENSDARG00000061505 1636 0.782 - 0.782 - - - - - - - mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
74. btr02 ENSDARG00000052215 401 0.782 - - - 0.782 - - - - - bloodthirsty-related gene family, member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-228]
75. si:ch211-51a6.2 ENSDARG00000030967 593 0.781 - 0.781 - - - - - - - si:ch211-51a6.2 [Source:ZFIN;Acc:ZDB-GENE-090313-118]
76. zgc:174160 484 0.781 - - - 0.781 - - - - - zgc:174160, transcript variant X1
77. mast4 1164 0.779 - - - - - - 0.779 - - microtubule associated serine/threonine kinase family member 4, transcript variant X6
78. mid1ip1b ENSDARG00000019302 1589 0.778 - - - - - - 0.778 - - MID1 interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1720]
79. IGFN1 IGFN1 5030 0.778 - 0.778 - - - - - - -
80. fscn2b ENSDARG00000074396 177 0.778 - 0.778 - - - - - - - fascin actin-bundling protein 2b, retinal [Source:ZFIN;Acc:ZDB-GENE-040426-1740]
81. PARD3B PARD3B 401 0.778 - - - - - - 0.778 - -
82. zgc:100832 ENSDARG00000012035 462 0.777 - 0.777 - - - - - - - zgc:100832 [Source:ZFIN;Acc:ZDB-GENE-040801-53]
83. usp33 ENSDARG00000016163 651 0.777 - - - 0.777 - - - - - ubiquitin specific peptidase 33 [Source:ZFIN;Acc:ZDB-GENE-040426-2323]
84. trap1 ENSDARG00000024317, ENSDARG00000114173 2189 0.777 - 0.777 - - - - - - - TNF receptor-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4257]
85. rprd1b ENSDARG00000038113 1105 0.776 - 0.776 - - - - - - - regulation of nuclear pre-mRNA domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-030131-355]
86. atp2a2a ENSDARG00000029439 940 0.776 - 0.776 - - - - - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2a [Source:ZFIN;Acc:ZDB-GENE-040426-702]
87. cdon ENSDARG00000061328 1441 0.775 - 0.775 - - - - - - - cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-021115-4]
88. sema6dl ENSDARG00000011533 319 0.775 - 0.775 - - - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like [Source:ZFIN;Acc:ZDB-GENE-050417-171]
89. gxylt2 ENSDARG00000044191, ENSDARG00000114372 966 0.775 - 0.775 - - - - - - - glucoside xylosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070424-64]
90. alpk3a ENSDARG00000078989 1992 0.775 - 0.775 - - - - - - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
91. ubr5 ENSDARG00000018192 9267 0.774 - 0.774 - - - - - - - ubiquitin protein ligase E3 component n-recognin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6559]
92. pdss1 ENSDARG00000017910 1290 0.774 - - - - - - 0.774 - - prenyl (decaprenyl) diphosphate synthase, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4430]
93. nars ENSDARG00000061100 2948 0.772 - 0.772 - - - - - - - asparaginyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-1016]
94. CASKIN2_1 CASKIN2_1 2299 0.772 - 0.772 - - - - - - -
95. arntl1a ENSDARG00000006791 550 0.772 - - - 0.772 - - - - - aryl hydrocarbon receptor nuclear translocator-like 1a [Source:ZFIN;Acc:ZDB-GENE-000509-1]
96. zgc:103759 ENSDARG00000019503 58 0.772 - 0.772 - - - - - - - zgc:103759 [Source:ZFIN;Acc:ZDB-GENE-041010-100]
97. dennd5a ENSDARG00000017006 3426 0.772 - 0.772 - - - - - - - DENN/MADD domain containing 5A [Source:ZFIN;Acc:ZDB-GENE-071211-1]
98. mir133b_1 671 0.771 - 0.771 - - - - - - - microRNA 133b
99. dnajc2 ENSDARG00000070477 902 0.771 - - - - - - 0.771 - - DnaJ (Hsp40) homolog, subfamily C, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1912]
100. spred1 ENSDARG00000041449, ENSDARG00000117025 1124 0.77 - - - 0.770 - - - - - sprouty-related, EVH1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2338]

There are 394 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA