Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mrm1

Gene Name Gene ID Reads Annotation
mrm1 ENSDARG00000059658 38 mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060526-229]










Genes with expression patterns similar to mrm1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mrm1 ENSDARG00000059658 38 7 1.000 - 1.000 1.000 1.000 1.000 - 1.000 1.000 mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060526-229]
2. ddit4 ENSDARG00000037618 37 1.94 0.996 - - - - 0.944 - - - DNA-damage-inducible transcript 4 [Source:ZFIN;Acc:ZDB-GENE-031002-35]
3. zgc:165515 ENSDARG00000116300 182 1.564 0.814 - - - - 0.750 - - - zgc:165515 [Source:ZFIN;Acc:ZDB-GENE-030131-1772]
4. galnt8b galnt8b 77 1 1.000 - - - - - - - -
5. CABZ01051901.1 ENSDARG00000113246 12 1 1.000 - - - - - - - - zona pellucida sperm-binding protein 4-like [Source:NCBI gene;Acc:100334275]
6. RPGRIP1 ENSDARG00000076055 10 1 1.000 - - - - - - - - RPGR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-394]
7. btr20 ENSDARG00000102992 4 1 1.000 - - - - - - - - bloodthirsty-related gene family, member 20 [Source:ZFIN;Acc:ZDB-GENE-060421-3419]
8. SBNO2_1 SBNO2_1 8 1 1.000 - - - - - - - -
9. TRIM14_13 TRIM14_13 18 1 1.000 - - - - - - - -
10. si:dkey-152b24.7 ENSDARG00000099715 26 1 1.000 - - - - - - - - si:dkey-152b24.7 [Source:ZFIN;Acc:ZDB-GENE-100921-77]
11. dnase2 ENSDARG00000073893 141 1 1.000 - - - - - - - - deoxyribonuclease II, lysosomal [Source:ZFIN;Acc:ZDB-GENE-010724-16]
12. ppm1lb ENSDARG00000089641 26 1 1.000 - - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Lb [Source:ZFIN;Acc:ZDB-GENE-060929-136]
13. EVA1B EVA1B 22 1 1.000 - - - - - - - -
14. si:ch73-103l1.2 ENSDARG00000096505 17 1 1.000 - - - - - - - - si:ch73-103l1.2 [Source:ZFIN;Acc:ZDB-GENE-121214-226]
15. si:ch211-232d10.2 si:ch211-232d10.2 9 1 1.000 - - - - - - - -
16. si:dkey-242h9.4 4 1 1.000 - - - - - - - - si:dkey-242h9.4
17. si:dkey-188c14.4 si:dkey-188c14.4 5 1 1.000 - - - - - - - -
18. zdhhc24 ENSDARG00000105134, ENSDARG00000110259, ENSDARG00000116301 6 1 1.000 - - - - - - - - zinc finger, DHHC-type containing 24 [Source:ZFIN;Acc:ZDB-GENE-040718-8]
19. fbxw9 ENSDARG00000058020 28 1 1.000 - - - - - - - - F-box and WD repeat domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-091204-198]
20. CR388095.2 ENSDARG00000117604 76 1 1.000 - - - - - - - -
21. smtla ENSDARG00000038191 42 1 1.000 - - - - - - - - somatolactin alpha [Source:ZFIN;Acc:ZDB-GENE-060123-2]
22. gpr27 ENSDARG00000006607 125 1 1.000 - - - - - - - - G protein-coupled receptor 27 [Source:ZFIN;Acc:ZDB-GENE-071022-3]
23. PGBD4_5 PGBD4_5 16 1 1.000 - - - - - - - -
24. TUBB6 ENSDARG00000104801 121 1 1.000 - - - - - - - - tubulin, beta 6 class V [Source:ZFIN;Acc:ZDB-GENE-070424-195]
25. ft1 ENSDARG00000059056 102 1 1.000 - - - - - - - - alpha(1,3)fucosyltransferase gene 1 [Source:ZFIN;Acc:ZDB-GENE-990715-17]
26. ptger2a ENSDARG00000011434 6 1 1.000 - - - - - - - - prostaglandin E receptor 2a (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040426-1321]
27. unc93b1 ENSDARG00000069114 37 1 1.000 - - - - - - - - unc-93 homolog B1, TLR signaling regulator [Source:ZFIN;Acc:ZDB-GENE-130424-1]
28. galk2 ENSDARG00000004059 122 1 1.000 - - - - - - - - galactokinase 2 [Source:ZFIN;Acc:ZDB-GENE-041114-143]
29. DPYD DPYD 52 1 1.000 - - - - - - - -
30. nr5a5 ENSDARG00000039116 3 1 1.000 - - - - - - - - nuclear receptor subfamily 5, group A, member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4652]
31. zgc:113516 20 0.994 0.994 - - - - - - - - zgc:113516
32. si:dkey-25o1.7 ENSDARG00000093570, ENSDARG00000100520, ENSDARG00000111049, ENSDARG00000112319 13 0.991 0.991 - - - - - - - - si:dkey-25o1.7 [Source:ZFIN;Acc:ZDB-GENE-091204-375]
33. si:ch211-95j8.3 ENSDARG00000092580 20 0.989 - - - - - 0.989 - - - si:ch211-95j8.3 [Source:ZFIN;Acc:ZDB-GENE-091204-307]
34. mgat1b ENSDARG00000036065 996 0.989 0.989 - - - - - - - - mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase b [Source:ZFIN;Acc:ZDB-GENE-061103-589]
35. chia.4 ENSDARG00000008541 14 0.988 0.988 - - - - - - - - chitinase, acidic.4 [Source:ZFIN;Acc:ZDB-GENE-030131-9279]
36. HIST1H4J HIST1H4J 31 0.984 0.984 - - - - - - - -
37. ZNF385D ENSDARG00000086162 202 0.979 0.979 - - - - - - - - zinc finger protein 385D [Source:ZFIN;Acc:ZDB-GENE-130201-2]
38. wu:fi42e03 ENSDARG00000070709 276 0.978 0.978 - - - - - - - - wu:fi42e03 [Source:ZFIN;Acc:ZDB-GENE-030131-6284]
39. si:dkeyp-104f11.4 si:dkeyp-104f11.4 40 0.977 0.977 - - - - - - - -
40. tmem63a ENSDARG00000031956 112 0.977 0.977 - - - - - - - - transmembrane protein 63A [Source:ZFIN;Acc:ZDB-GENE-041210-107]
41. sybu ENSDARG00000060112 22 0.976 0.976 - - - - - - - - syntabulin (syntaxin-interacting) [Source:ZFIN;Acc:ZDB-GENE-060929-1202]
42. zc3h10 ENSDARG00000030335 236 0.973 0.973 - - - - - - - - zinc finger CCCH-type containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2359]
43. BCAM ENSDARG00000090190 19 0.972 0.972 - - - - - - - - basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
44. mgme1 ENSDARG00000016656 173 0.968 0.968 - - - - - - - - mitochondrial genome maintenance exonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-041212-68]
45. FEZ2_1 FEZ2_1 153 0.968 0.968 - - - - - - - -
46. mfge8a ENSDARG00000015349 66 0.968 0.968 - - - - - - - - milk fat globule-EGF factor 8 protein a [Source:ZFIN;Acc:ZDB-GENE-050327-9]
47. BX247898.1 BX247898.1 75 0.968 - - - - - 0.968 - - -
48. CU856237.1 CU856237.1 153 0.967 0.967 - - - - - - - -
49. pdzd4 175 0.965 0.965 - - - - - - - - PDZ domain containing 4, transcript variant X2
50. APH1A APH1A 129 0.961 0.961 - - - - - - - -
51. si:dkey-199m13.7 ENSDARG00000099837, ENSDARG00000111824 22 0.958 0.958 - - - - - - - - si:dkey-199m13.7 [Source:ZFIN;Acc:ZDB-GENE-110914-26]
52. si:ch211-233g6.8 si:ch211-233g6.8 1005 0.957 0.957 - - - - - - - -
53. rwdd2b ENSDARG00000055426 294 0.956 0.956 - - - - - - - - RWD domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041001-119]
54. prmt3 ENSDARG00000019791 268 0.954 - - - - - 0.954 - - - protein arginine methyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-041105-1]
55. LAYN LAYN 94 0.954 - - - - - 0.954 - - -
56. ptprz1a ENSDARG00000051814 385 0.951 0.951 - - - - - - - - protein tyrosine phosphatase, receptor-type, Z polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-090406-1]
57. hlfb ENSDARG00000061011 48 0.95 0.950 - - - - - - - - hepatic leukemia factor b [Source:ZFIN;Acc:ZDB-GENE-110420-3]
58. dnajb2 ENSDARG00000058644 30 0.95 0.950 - - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 2 [Source:ZFIN;Acc:ZDB-GENE-061013-537]
59. TRAF3IP2 TRAF3IP2 153 0.948 0.948 - - - - - - - -
60. parvg ENSDARG00000067711 147 0.945 0.945 - - - - - - - - parvin, gamma [Source:ZFIN;Acc:ZDB-GENE-070410-67]
61. CABZ01074298.1 ENSDARG00000087767 6 0.944 - - - - - 0.944 - - - uncharacterized LOC100334396 [Source:NCBI gene;Acc:100334396]
62. ssh1b ENSDARG00000010031 4 0.944 - - - - - 0.944 - - - slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]
63. smarcd3b ENSDARG00000019969 11 0.944 - - - - - 0.944 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]
64. pde5ab ENSDARG00000051915 18 0.944 - - - - - 0.944 - - - phosphodiesterase 5A, cGMP-specific, b [Source:ZFIN;Acc:ZDB-GENE-060824-4]
65. ttc25 ENSDARG00000058140 2 0.944 - - - - - 0.944 - - - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
66. gad1a ENSDARG00000093411 2 0.944 - - - - - 0.944 - - - glutamate decarboxylase 1a [Source:ZFIN;Acc:ZDB-GENE-070912-472]
67. PSMB11_1 PSMB11_1 2 0.944 - - - - - 0.944 - - -
68. caps2 ENSDARG00000058486 4 0.944 - - - - - 0.944 - - - calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
69. MDH1B ENSDARG00000018008 29 0.944 - - - - - 0.944 - - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
70. RAB1B RAB1B 20 0.944 - - - - - 0.944 - - -
71. si:ch211-188c16.1 ENSDARG00000077288 16 0.944 - - - - - 0.944 - - - si:ch211-188c16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-162]
72. BEGAIN BEGAIN 39 0.944 - - - - - 0.944 - - -
73. nfixa ENSDARG00000043226 14 0.944 - - - - - 0.944 - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
74. si:rp71-23d18.4 ENSDARG00000092779 1 0.944 - - - - - 0.944 - - - si:rp71-23d18.4 [Source:ZFIN;Acc:ZDB-GENE-050208-761]
75. sostdc1b ENSDARG00000056021, ENSDARG00000114829 33 0.944 - - - - - 0.944 - - - sclerostin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060503-653]
76. BX323793.4 BX323793.4 8 0.944 - - - - - 0.944 - - -
77. FSD2 518 0.944 0.944 - - - - - - - - fibronectin type III and SPRY domain containing 2
78. CU681842.2 CU681842.2 1 0.944 - - - - - 0.944 - - -
79. cbln10 ENSDARG00000023157 17 0.944 - - - - - 0.944 - - - cerebellin 10 [Source:ZFIN;Acc:ZDB-GENE-030131-4615]
80. si:dkey-217m5.3 si:dkey-217m5.3 22 0.944 - - - - - 0.944 - - -
81. si:dkey-200l5.4 ENSDARG00000095294 13 0.944 - - - - - 0.944 - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
82. NHLRC2 ENSDARG00000089581, ENSDARG00000113639 172 0.944 - - - - - 0.944 - - - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
83. jakmip2 ENSDARG00000053547 32 0.944 - - - - - 0.944 - - - janus kinase and microtubule interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-293]
84. or103-5 ENSDARG00000075128 1 0.944 - - - - - 0.944 - - - odorant receptor, family C, subfamily 103, member 5 [Source:ZFIN;Acc:ZDB-GENE-070806-52]
85. ms4a17a.17 ENSDARG00000054898, ENSDARG00000116378 37 0.944 - - - - - 0.944 - - - membrane-spanning 4-domains, subfamily A, member 17A.17 [Source:ZFIN;Acc:ZDB-GENE-070424-27]
86. SLC22A7_1 SLC22A7_1 2 0.944 - - - - - 0.944 - - -
87. tph1a ENSDARG00000029432, ENSDARG00000114918 24 0.944 - - - - - 0.944 - - - tryptophan hydroxylase 1 (tryptophan 5-monooxygenase) a [Source:ZFIN;Acc:ZDB-GENE-030317-1]
88. si:ch211-153f2.3 ENSDARG00000098980 66 0.944 - - - - - 0.944 - - - si:ch211-153f2.3 [Source:ZFIN;Acc:ZDB-GENE-081104-135]
89. SOX8 SOX8 22 0.944 - - - - - 0.944 - - -
90. si:ch211-67f24.7 ENSDARG00000092721, ENSDARG00000092896 11 0.944 - - - - - 0.944 - - - si:ch211-67f24.7 [Source:ZFIN;Acc:ZDB-GENE-090313-129]
91. CHST8 23 0.944 - - - - - 0.944 - - - carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8, transcript variant X1
92. EDN3_1 EDN3_1 24 0.944 - - - - - 0.944 - - -
93. si:dkey-263b2.2 si:dkey-263b2.2 1 0.944 - - - - - 0.944 - - -
94. vtg5 ENSDARG00000092126, ENSDARG00000113031 3 0.944 - - - - - 0.944 - - - vitellogenin 5 [Source:ZFIN;Acc:ZDB-GENE-001201-4]
95. PGBD4 ENSDARG00000079328 20 0.944 - - - - - 0.944 - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
96. BX571880.1 ENSDARG00000097533 499 0.944 - - - - - 0.944 - - -
97. si:dkey-13n15.11 ENSDARG00000078002 8 0.944 - - - - - 0.944 - - - si:dkey-13n15.11 [Source:ZFIN;Acc:ZDB-GENE-070705-295]
98. BX537277.3 ENSDARG00000117762 1 0.944 - - - - - 0.944 - - -
99. ZSWIM2 ENSDARG00000075700 8 0.944 - - - - - 0.944 - - - zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
100. si:dkey-265e15.2 ENSDARG00000089582, ENSDARG00000113391 1 0.944 - - - - - 0.944 - - - si:dkey-265e15.2 [Source:ZFIN;Acc:ZDB-GENE-081103-3]

There are 358 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA