Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for mms19

Gene Name Gene ID Reads Annotation
mms19 ENSDARG00000079067 65 MMS19 homolog, cytosolic iron-sulfur assembly component [Source:ZFIN;Acc:ZDB-GENE-120316-2]










Genes with expression patterns similar to mms19

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mms19 ENSDARG00000079067 65 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 MMS19 homolog, cytosolic iron-sulfur assembly component [Source:ZFIN;Acc:ZDB-GENE-120316-2]
2. si:ch73-389b16.2 ENSDARG00000103802 340 2.415 - 0.713 - 0.903 0.799 - - - - si:ch73-389b16.2 [Source:ZFIN;Acc:ZDB-GENE-050411-113]
3. cog1 ENSDARG00000105131 35 2 1.000 - - - - - 1.000 - - component of oligomeric golgi complex 1 [Source:ZFIN;Acc:ZDB-GENE-050302-128]
4. CABZ01062083.1 CABZ01062083.1 40 1.927 - - - - 0.981 - 0.946 - -
5. ch25hl2 ENSDARG00000038728 100 1.92 1.000 - - - 0.920 - - - - cholesterol 25-hydroxylase like 2 [Source:ZFIN;Acc:ZDB-GENE-080204-82]
6. si:ch211-274p24.4 ENSDARG00000087088 36 1.907 1.000 - - - - - 0.907 - - si:ch211-274p24.4 [Source:ZFIN;Acc:ZDB-GENE-091204-337]
7. NINJ1 ENSDARG00000103663 43 1.895 - - - - 0.895 - 1.000 - - ninjurin 1 [Source:HGNC Symbol;Acc:HGNC:7824]
8. myl2b ENSDARG00000053424 226 1.845 1.000 0.845 - - - - - - - myosin, light chain 2b, regulatory, cardiac, slow [Source:ZFIN;Acc:ZDB-GENE-060331-137]
9. irak4 ENSDARG00000100534 108 1.83 0.897 0.933 - - - - - - - interleukin-1 receptor-associated kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-738]
10. zp3a.2 ENSDARG00000042130 163 1.77 0.913 - - - 0.857 - - - - zona pellucida glycoprotein 3a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040727-2]
11. ddx31 ENSDARG00000035507 167 1.757 - - - 0.958 - - 0.799 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 [Source:ZFIN;Acc:ZDB-GENE-030131-3973]
12. si:dkey-65b12.6 ENSDARG00000076830 2489 1.74 - 0.881 - - 0.859 - - - - si:dkey-65b12.6 [Source:ZFIN;Acc:ZDB-GENE-060526-329]
13. CR936200.1 CR936200.1 327 1.737 0.876 - - 0.861 - - - - -
14. rxrgb ENSDARG00000004697 332 1.737 - 0.789 - 0.948 - - - - - retinoid X receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-040718-34]
15. slc51a ENSDARG00000045306 33 1.729 0.954 - - - - 0.775 - - - solute carrier family 51, alpha subunit [Source:ZFIN;Acc:ZDB-GENE-040912-10]
16. si:dkey-208k4.1 si:dkey-208k4.1 15 1.718 1.000 - - - - - 0.718 - -
17. ripply3 ENSDARG00000036974 30 1.716 - 0.778 - - 0.938 - - - - ripply transcriptional repressor 3 [Source:ZFIN;Acc:ZDB-GENE-060113-3]
18. CABZ01044346.1 CABZ01044346.1 12 1.713 1.000 0.713 - - - - - - -
19. grk1a ENSDARG00000058803 13 1.713 - 0.713 - - - 1.000 - - - G protein-coupled receptor kinase 1 a [Source:ZFIN;Acc:ZDB-GENE-050823-1]
20. CU672227.1 ENSDARG00000105807 15 1.706 1.000 - - - - - - - 0.706
21. si:dkey-66i24.9 ENSDARG00000096689 796 1.704 - - - 0.892 0.812 - - - - si:dkey-66i24.9 [Source:ZFIN;Acc:ZDB-GENE-130531-63]
22. olfml3a ENSDARG00000061852 139 1.7 0.723 - - 0.977 - - - - - olfactomedin-like 3a [Source:ZFIN;Acc:ZDB-GENE-060825-31]
23. BCL2 BCL2 122 1.689 0.769 - - - 0.920 - - - -
24. fxyd6 ENSDARG00000100971 51 1.68 - 0.938 0.742 - - - - - - FXYD domain containing ion transport regulator 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5919]
25. fam169ab ENSDARG00000004177 232 1.667 0.713 - - 0.954 - - - - - family with sequence similarity 169, member Ab [Source:ZFIN;Acc:ZDB-GENE-091118-95]
26. tfb1m ENSDARG00000040727 142 1.664 - - - - 0.891 0.773 - - - transcription factor B1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-060929-1010]
27. hcn4l ENSDARG00000074419 46 1.657 - - 0.709 - - - 0.948 - - hyperpolarization activated cyclic nucleotide-gated potassium channel 4l [Source:ZFIN;Acc:ZDB-GENE-110411-3]
28. SNORD36 SNORD36 71 1.638 - - - - 0.846 - 0.792 - -
29. rab4a ENSDARG00000019144 192 1.629 0.823 - - - 0.806 - - - - RAB4a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040525-1]
30. smarca2 ENSDARG00000008904, ENSDARG00000115738 644 1.623 - - - 0.843 0.780 - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5964]
31. rhoab ENSDARG00000094673 26 1.623 0.905 - - - - - 0.718 - - ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2]
32. fam58a 423 1.62 - - - 0.846 0.774 - - - - family with sequence similarity 58, member A, transcript variant X1
33. C11H3orf83 C11H3orf83 30 1.6 - 0.713 - - - 0.887 - - -
34. atrip ENSDARG00000063076 385 1.588 - 0.736 - 0.852 - - - - - ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
35. mc1r ENSDARG00000020237 108 1.581 0.774 - - - - - 0.807 - - melanocortin 1 receptor [Source:ZFIN;Acc:ZDB-GENE-030502-1]
36. cog8 ENSDARG00000002798 229 1.566 - 0.854 - - 0.712 - - - - component of oligomeric golgi complex 8 [Source:ZFIN;Acc:ZDB-GENE-050320-74]
37. EXD1 ENSDARG00000098669 27 1.541 0.823 - - - - - 0.718 - - exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
38. FP016199.1 FP016199.1 43 1.537 - - - - - 0.819 0.718 - -
39. rap2ab ENSDARG00000040246 63 1.524 - - - - 0.806 - 0.718 - - RAP2A, member of RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-090312-116]
40. C3H7orf55 C3H7orf55 359 1.52 - - - 0.748 0.772 - - - -
41. GPR17 ENSDARG00000062030 713 1.48 0.743 - - 0.737 - - - - - G protein-coupled receptor 17 [Source:ZFIN;Acc:ZDB-GENE-100922-133]
42. si:ch211-209f23.3 ENSDARG00000095607 15 1.476 - 0.758 - - - - 0.718 - - si:ch211-209f23.3 [Source:ZFIN;Acc:ZDB-GENE-100921-45]
43. SLC47A1_2 SLC47A1_2 50 1.468 - 0.713 - - - 0.755 - - -
44. setmar ENSDARG00000074836 29 1 1.000 - - - - - - - - SET domain and mariner transposase fusion gene [Source:ZFIN;Acc:ZDB-GENE-080204-61]
45. PARP9 ENSDARG00000006848 34 1 - - - - - - 1.000 - - poly(ADP-ribose) polymerase family member 9 [Source:ZFIN;Acc:ZDB-GENE-081104-179]
46. cdcp1a ENSDARG00000058943 70 1 1.000 - - - - - - - - CUB domain containing protein 1a [Source:ZFIN;Acc:ZDB-GENE-050327-55]
47. shox2 ENSDARG00000075713 104 1 1.000 - - - - - - - - short stature homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1457]
48. HIST1H2BA ENSDARG00000116654 10 1 1.000 - - - - - - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
49. edil3 edil3 24 1 1.000 - - - - - - - -
50. oprm1 ENSDARG00000039434 22 1 1.000 - - - - - - - - opioid receptor, mu 1 [Source:ZFIN;Acc:ZDB-GENE-010125-1]
51. si:dkey-156m18.1 si:dkey-156m18.1 13 1 1.000 - - - - - - - -
52. C3AR1 18 1 1.000 - - - - - - - - C3a anaphylatoxin chemotactic receptor
53. trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 1 1.000 - - - - - - - - transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]
54. APCDD1 ENSDARG00000098203 10 1 1.000 - - - - - - - - APC down-regulated 1 [Source:HGNC Symbol;Acc:HGNC:15718]
55. ABCA7 ABCA7 12 1 1.000 - - - - - - - -
56. pls1 ENSDARG00000039272 39 1 1.000 - - - - - - - - plastin 1 (I isoform) [Source:ZFIN;Acc:ZDB-GENE-030131-6205]
57. GPR22_1 GPR22_1 28 1 1.000 - - - - - - - -
58. CABZ01070007.1 CABZ01070007.1 5 1 1.000 - - - - - - - -
59. dnali1 ENSDARG00000069815 10 1 - - - - - - 1.000 - - dynein, axonemal, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-080204-7]
60. atxn1b ENSDARG00000060862 345 1 1.000 - - - - - - - - ataxin 1b [Source:ZFIN;Acc:ZDB-GENE-061218-2]
61. slc5a2 ENSDARG00000100919 47 1 1.000 - - - - - - - - solute carrier family 5 (sodium/glucose cotransporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2498]
62. zgc:171501 ENSDARG00000075375 11 1 - - - - - - 1.000 - - zgc:171501 [Source:ZFIN;Acc:ZDB-GENE-080204-10]
63. mamdc2b ENSDARG00000073695 26 1 1.000 - - - - - - - - MAM domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091117-16]
64. paqr7a ENSDARG00000100462 15 1 1.000 - - - - - - - - progestin and adipoQ receptor family member VII, a [Source:ZFIN;Acc:ZDB-GENE-070705-346]
65. nrn1b ENSDARG00000042656 44 1 - - - - - - 1.000 - - neuritin 1b [Source:ZFIN;Acc:ZDB-GENE-041010-98]
66. ftr14l ENSDARG00000078254 2 1 1.000 - - - - - - - - finTRIM family, member 14-like [Source:ZFIN;Acc:ZDB-GENE-090312-123]
67. BX470254.1_1 ENSDARG00000097402 50 1 1.000 - - - - - - - -
68. CIR1 ENSDARG00000099733 66 1 1.000 - - - - - - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
69. FP017295.1 ENSDARG00000091185 22 1 1.000 - - - - - - - -
70. KCNAB1 KCNAB1 918 1 1.000 - - - - - - - -
71. si:ch211-15j1.1 ENSDARG00000093177 1 1 1.000 - - - - - - - - si:ch211-15j1.1 [Source:ZFIN;Acc:ZDB-GENE-081031-25]
72. gabrb2 ENSDARG00000079586 33 1 1.000 - - - - - - - - gamma-aminobutyric acid (GABA) A receptor, beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8196]
73. dapk3 ENSDARG00000074447 12 1 1.000 - - - - - - - - death-associated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3026]
74. elfn2 elfn2 1 1 1.000 - - - - - - - -
75. CECR6 25 1 1.000 - - - - - - - - cat eye syndrome chromosome region, candidate 6
76. pak1_1 ENSDARG00000103959 28 1 1.000 - - - - - - - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
77. dand5 ENSDARG00000036471 8 1 1.000 - - - - - - - - DAN domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040421-2]
78. fam19a5 fam19a5 8 1 1.000 - - - - - - - -
79. bckdhb ENSDARG00000014676 17 1 1.000 - - - - - - - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
80. CU694319.1 CU694319.1 72 1 1.000 - - - - - - - -
81. si:dkey-60a16.4 si:dkey-60a16.4 14 1 1.000 - - - - - - - -
82. c6ast1 ENSDARG00000069216 8 1 1.000 - - - - - - - - six-cysteine containing astacin protease 1 [Source:ZFIN;Acc:ZDB-GENE-070621-1]
83. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 1 1.000 - - - - - - - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
84. cntn5 ENSDARG00000021584 30 1 1.000 - - - - - - - - contactin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-5640]
85. CABZ01066717.2 CABZ01066717.2 10 1 1.000 - - - - - - - -
86. me1 ENSDARG00000053215 107 1 1.000 - - - - - - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
87. si:ch211-236p5.3 ENSDARG00000086418 138 1 - 1.000 - - - - - - - si:ch211-236p5.3 [Source:ZFIN;Acc:ZDB-GENE-081028-31]
88. MLLT4 MLLT4 67 1 1.000 - - - - - - - -
89. MPPED1 ENSDARG00000088181 117 1 1.000 - - - - - - - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
90. tecrl2 tecrl2 11 1 1.000 - - - - - - - -
91. p2rx3a ENSDARG00000010477, ENSDARG00000115270 6 1 1.000 - - - - - - - - purinergic receptor P2X, ligand-gated ion channel, 3a [Source:ZFIN;Acc:ZDB-GENE-000427-3]
92. si:dkey-34e4.1 ENSDARG00000022085 5 1 1.000 - - - - - - - - si:dkey-34e4.1 [Source:ZFIN;Acc:ZDB-GENE-070705-456]
93. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 1 1.000 - - - - - - - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
94. SNORA38 SNORA38 574 1 1.000 - - - - - - - -
95. itga8 ENSDARG00000078717 215 1 1.000 - - - - - - - - integrin, alpha 8 [Source:ZFIN;Acc:ZDB-GENE-080220-48]
96. depdc1b 1 1 1.000 - - - - - - - - DEP domain containing 1B
97. DSEL DSEL 1 1 1.000 - - - - - - - -
98. AL935181.2 AL935181.2 9 1 1.000 - - - - - - - -
99. si:dkey-9i23.6 ENSDARG00000094678 58 1 1.000 - - - - - - - - si:dkey-9i23.6 [Source:ZFIN;Acc:ZDB-GENE-090313-365]
100. ebf1b ENSDARG00000069196 64 1 1.000 - - - - - - - - early B cell factor 1b [Source:ZFIN;Acc:ZDB-GENE-090814-2]

There are 1368 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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