Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for mir130b

Gene Name Gene ID Reads Annotation
mir130b 180 microRNA 130b










Genes with expression patterns similar to mir130b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mir130b 180 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 microRNA 130b
2. ly75 ENSDARG00000053113 196 1.896 0.903 - - - - - - 0.993 - lymphocyte antigen 75 [Source:ZFIN;Acc:ZDB-GENE-050309-166]
3. GPR180 73 1.847 0.978 - - - - - - - 0.869 G protein-coupled receptor 180, transcript variant X2
4. spef2 ENSDARG00000098330 59 1.839 - - - - - - - 0.997 0.842 sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
5. CU929356.4 CU929356.4 86 1.822 0.978 0.844 - - - - - - -
6. fasn_1 ENSDARG00000087657 31 1.815 0.978 - - - - - - - 0.837 fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
7. CREB3L3 CREB3L3 24 1.809 0.978 0.831 - - - - - - -
8. dcaf11 ENSDARG00000009868, ENSDARG00000113596 57 1.808 0.964 0.844 - - - - - - - ddb1 and cul4 associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-050809-116]
9. relb ENSDARG00000086173 762 1.801 0.897 - - - - - - 0.904 - v-rel avian reticuloendotheliosis viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-030131-9531]
10. nadl1.2 695 1.796 - 0.867 - - - - - 0.929 - neural adhesion molecule L1.2, transcript variant X1
11. BX897684.1 BX897684.1 636 1.777 0.945 0.832 - - - - - - -
12. CIT CIT 212 1.763 - 0.774 - - - - - 0.989 -
13. zfpm1 ENSDARG00000041572, ENSDARG00000109585 331 1.759 - - - - - 0.840 - 0.919 - zinc finger protein, FOG family member 1 [Source:ZFIN;Acc:ZDB-GENE-050419-238]
14. SLC41A2 SLC41A2 202 1.753 0.924 - - - - - - 0.829 -
15. ncoa6 ENSDARG00000071272 759 1.739 - 0.760 - - - - - 0.979 - nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
16. fgf12a ENSDARG00000027957 143 1.738 - - - - - 0.760 - 0.978 - fibroblast growth factor 12a [Source:ZFIN;Acc:ZDB-GENE-050221-6]
17. zgc:113443 359 1.696 0.957 0.739 - - - - - - - zgc:113443, transcript variant X3
18. cntn3a.1 ENSDARG00000062880 156 1.691 - 0.861 - - - 0.830 - - - contactin 3a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-081030-10]
19. cldna ENSDARG00000069888 712 1.69 0.879 - - - - - - 0.811 - claudin a [Source:ZFIN;Acc:ZDB-GENE-010328-1]
20. TCAIM ENSDARG00000079881 424 1.682 0.721 - - - - - - 0.961 - T cell activation inhibitor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-160113-67]
21. DTX3 DTX3 303 1.672 0.924 0.748 - - - - - - -
22. ppp1r11 ENSDARG00000036063 587 1.664 0.755 - - - - - - 0.909 - protein phosphatase 1, regulatory (inhibitor) subunit 11 [Source:ZFIN;Acc:ZDB-GENE-050417-99]
23. RNF219 ENSDARG00000090904 176 1.654 0.869 0.785 - - - - - - - ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
24. eml3 ENSDARG00000058038 449 1.653 0.756 - - - - 0.897 - - - echinoderm microtubule associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-110304-3]
25. trappc3 ENSDARG00000045364 1021 1.652 - - - - - 0.764 - 0.888 - trafficking protein particle complex 3 [Source:ZFIN;Acc:ZDB-GENE-040801-120]
26. FP236789.1 ENSDARG00000105406 57 1.65 0.929 - - - - - - - 0.721
27. zer1 ENSDARG00000105123 682 1.65 0.823 0.827 - - - - - - - zyg-11 related, cell cycle regulator [Source:ZFIN;Acc:ZDB-GENE-040426-2307]
28. txnl4b ENSDARG00000058962 296 1.646 0.804 - - - - 0.842 - - - thioredoxin-like 4B [Source:ZFIN;Acc:ZDB-GENE-051030-63]
29. PRR5 PRR5 630 1.644 - 0.880 - - - - - 0.764 -
30. LMAN2L LMAN2L 555 1.639 0.802 - - - - - - 0.837 -
31. atp6ap1a ENSDARG00000041417 898 1.636 - 0.871 - - - - - 0.765 - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
32. med14 ENSDARG00000009953 1383 1.631 - 0.854 - - - - - 0.777 - mediator complex subunit 14 [Source:ZFIN;Acc:ZDB-GENE-030131-8867]
33. ralgps2 ENSDARG00000026519 1610 1.618 - 0.815 - - - - - 0.803 - Ral GEF with PH domain and SH3 binding motif 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1212]
34. RSPH1 289 1.616 - - - - - - - 0.809 0.807 radial spoke head 1 homolog (Chlamydomonas), transcript variant X2
35. cep135 ENSDARG00000002991 164 1.613 - 0.890 - - - - - - 0.723 centrosomal protein 135 [Source:ZFIN;Acc:ZDB-GENE-041210-325]
36. HHLA2_1 HHLA2_1 456 1.61 - - - - - - 0.755 0.855 -
37. ada ENSDARG00000003113 228 1.591 - - - - - 0.702 - 0.889 - adenosine deaminase [Source:ZFIN;Acc:ZDB-GENE-040718-393]
38. ENSDARG00000074705 ENSDARG00000074705 507 1.577 0.771 - - - - 0.806 - - -
39. cyb5d1 ENSDARG00000056007 67 1.576 - 0.721 - - - - - - 0.855 cytochrome b5 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-173]
40. rprd2b ENSDARG00000074676 809 1.575 - - - - - 0.718 - 0.857 - regulation of nuclear pre-mRNA domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110719-1]
41. sgcg ENSDARG00000038107 711 1.574 - - - - - - 0.704 0.870 - sarcoglycan, gamma [Source:ZFIN;Acc:ZDB-GENE-030724-2]
42. pink1 ENSDARG00000001929 320 1.572 0.834 - - - - - 0.738 - - PTEN induced putative kinase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-53]
43. b3gnt7l ENSDARG00000053133 264 1.568 0.773 - - - - - - - 0.795 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7, like [Source:ZFIN;Acc:ZDB-GENE-040718-143]
44. lcmt1 ENSDARG00000045140, ENSDARG00000111263 413 1.566 0.716 0.850 - - - - - - - leucine carboxyl methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-75]
45. nrip1a ENSDARG00000068965 684 1.558 0.724 0.834 - - - - - - - nuclear receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040723-8]
46. CU570681.1 CU570681.1 512 1.538 - - - - - 0.828 - 0.710 -
47. COX19 ENSDARG00000063882 419 1.526 - - - - 0.704 - - 0.822 - cytochrome c oxidase assembly factor COX19 [Source:ZFIN;Acc:ZDB-GENE-070410-29]
48. slc27a1b ENSDARG00000038352, ENSDARG00000104949 298 1.522 - 0.713 - - - 0.809 - - - solute carrier family 27 (fatty acid transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-061013-672]
49. pex10 ENSDARG00000041511 52 1.511 - 0.733 - - - - - - 0.778 peroxisomal biogenesis factor 10 [Source:ZFIN;Acc:ZDB-GENE-041010-71]
50. hrasb ENSDARG00000005651 662 1.51 0.792 0.718 - - - - - - - -Ha-ras Harvey rat sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050522-466]
51. ck2a2a ck2a2a 1695 1.508 - - - - - 0.705 - 0.803 -
52. thrab ENSDARG00000052654 315 1.498 0.737 - - - - 0.761 - - - thyroid hormone receptor alpha b [Source:ZFIN;Acc:ZDB-GENE-060613-1]
53. setd4 ENSDARG00000036592 237 1.49 - - - - 0.776 0.714 - - - SET domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-050808-2]
54. mepce ENSDARG00000059461 703 1.477 0.714 0.763 - - - - - - - methylphosphate capping enzyme [Source:ZFIN;Acc:ZDB-GENE-030131-3936]
55. oxct1a ENSDARG00000013063 1517 1.477 - - - - - - 0.708 0.769 - 3-oxoacid CoA transferase 1a [Source:ZFIN;Acc:ZDB-GENE-040723-3]
56. gpm6ba ENSDARG00000005739, ENSDARG00000110895 1177 1.473 - - - - - 0.727 - 0.746 - glycoprotein M6Ba [Source:ZFIN;Acc:ZDB-GENE-030710-9]
57. ak5l ENSDARG00000017739 1058 1.452 - - - - - 0.708 - 0.744 - adenylate kinase 5, like [Source:ZFIN;Acc:ZDB-GENE-050410-2]
58. psmd10 ENSDARG00000015628, ENSDARG00000109675 983 1.44 - 0.718 - - - 0.722 - - - proteasome 26S subunit, non-ATPase 10 [Source:ZFIN;Acc:ZDB-GENE-050112-1]
59. si:dkey-100h21.2 si:dkey-100h21.2 30 0.999 - - - - - - - 0.999 -
60. IKZF4 ENSDARG00000037068 36 0.999 - - - - - - - 0.999 - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
61. adcyap1a ENSDARG00000004015 67 0.999 - - - - - - - 0.999 - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
62. jam3a ENSDARG00000114589 630 0.999 - - - - - - - 0.999 - junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
63. si:ch73-167f18.3 si:ch73-167f18.3 78 0.999 - - - - - - - 0.999 -
64. pex5la ENSDARG00000022518, ENSDARG00000109971, ENSDARG00000110029, ENSDARG00000112628 28 0.999 - - - - - - - 0.999 - peroxisomal biogenesis factor 5-like a [Source:ZFIN;Acc:ZDB-GENE-070705-298]
65. pde6b ENSDARG00000011671 44 0.999 - - - - - - - 0.999 - phosphodiesterase 6B, cGMP-specific, rod, beta [Source:ZFIN;Acc:ZDB-GENE-090421-2]
66. POLQ ENSDARG00000044622, ENSDARG00000110374 94 0.998 - - - - - - - 0.998 - polymerase (DNA directed), theta [Source:ZFIN;Acc:ZDB-GENE-040724-232]
67. VDAC3 ENSDARG00000003695 34 0.997 - - - - - - - 0.997 - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
68. GDPD4_1 GDPD4_1 190 0.997 - - - - - - - 0.997 -
69. MAP7 MAP7 98 0.996 - - - - - - - 0.996 -
70. hoxa4a 37 0.996 - - - - - - - 0.996 - homeobox A4a, transcript variant X4
71. pus7 ENSDARG00000031774 195 0.996 - - - - - - - 0.996 - pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
72. ankdd1b ENSDARG00000025866 51 0.996 - - - - - - - 0.996 - ankyrin repeat and death domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060526-136]
73. rpgra ENSDARG00000056617 77 0.995 - - - - - - - 0.995 - retinitis pigmentosa GTPase regulator a [Source:ZFIN;Acc:ZDB-GENE-070912-423]
74. si:dkey-157e10.7 si:dkey-157e10.7 105 0.995 - - - - - - - 0.995 -
75. TTF1_4 TTF1_4 504 0.994 - - - - - - - 0.994 -
76. prkag3b ENSDARG00000000369 1945 0.993 - - - - - - - 0.993 - protein kinase, AMP-activated, gamma 3b non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060421-6938]
77. KBTBD13_1 KBTBD13_1 116 0.992 - - - - - - - 0.992 -
78. BX005410.2 BX005410.2 44 0.992 - - - - - - - 0.992 -
79. si:dkey-17e6.2 si:dkey-17e6.2 72 0.992 - - - - - - - 0.992 -
80. TFPT ENSDARG00000089572, ENSDARG00000111694 112 0.991 - - - - - - - 0.991 - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
81. zgc:174688 zgc:174688 170 0.99 - - - - - - - 0.990 -
82. SHANK1 ENSDARG00000060539 102 0.99 - - - - - - - 0.990 - SH3 and multiple ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130530-691]
83. mea1 ENSDARG00000039820 589 0.99 - - - - - - - 0.990 - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
84. tarsl2 ENSDARG00000092774 505 0.99 - - - - - - - 0.990 - threonyl-tRNA synthetase-like 2 [Source:ZFIN;Acc:ZDB-GENE-081104-490]
85. si:ch211-283g2.2 ENSDARG00000108340, ENSDARG00000108953 59 0.99 - - - - - - - 0.990 - si:ch211-283g2.2 [Source:ZFIN;Acc:ZDB-GENE-060526-151]
86. nrxn2b ENSDARG00000063150 343 0.989 - - - - - - - 0.989 - neurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]
87. C25H12orf29 C25H12orf29 31 0.989 0.989 - - - - - - - -
88. hn1a hn1a 115 0.989 - - - - - - - 0.989 -
89. pard3 pard3 161 0.988 - - - - - - - 0.988 -
90. rwdd2b ENSDARG00000055426 294 0.988 - - - - - - - 0.988 - RWD domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041001-119]
91. slc6a6a ENSDARG00000012534 183 0.987 - - - - - - - 0.987 - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
92. FAM163A ENSDARG00000093021 86 0.987 0.987 - - - - - - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
93. CABZ01045230.1 CABZ01045230.1 158 0.987 - - - - - - - 0.987 -
94. BX511021.1 ENSDARG00000073936 647 0.986 - - - - - - - 0.986 - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
95. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 0.986 - - - - - - - 0.986 - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
96. b3galtla b3galtla 111 0.986 - - - - - - - 0.986 -
97. zgc:174877 ENSDARG00000079278 143 0.985 - - - - - - - 0.985 - zgc:174877 [Source:ZFIN;Acc:ZDB-GENE-041008-66]
98. commd1 ENSDARG00000031203 340 0.984 - - - - - - - 0.984 - copper metabolism (Murr1) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060512-329]
99. nrp2b ENSDARG00000038446 783 0.983 - - - - - - - 0.983 - neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]
100. aatkb ENSDARG00000104442 392 0.983 - - - - - - - 0.983 - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]

There are 1356 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA