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Results for mir124-3

Gene Name Gene ID Reads Annotation
mir124-3 26 microRNA 124-3










Genes with expression patterns similar to mir124-3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. mir124-3 26 6 - - 1.000 1.000 1.000 1.000 - 1.000 1.000 microRNA 124-3
2. BX324198.1 BX324198.1 12 1.841 - - - 0.860 - 0.981 - - -
3. rgs9b ENSDARG00000045156, ENSDARG00000111650 77 1.828 - - 0.840 - - 0.988 - - - regulator of G protein signaling 9b [Source:ZFIN;Acc:ZDB-GENE-040426-1708]
4. adck1 ENSDARG00000062561 22 1.826 - - - - - 0.971 - - 0.855 aarF domain containing kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080401-5]
5. arf3a ENSDARG00000070539 29 1.807 - - - - 0.811 0.996 - - - ADP-ribosylation factor 3a [Source:ZFIN;Acc:ZDB-GENE-040801-176]
6. si:dkey-270b7.1 si:dkey-270b7.1 83 1.782 - - - - - 0.925 - - 0.857
7. si:dkey-163m14.10 si:dkey-163m14.10 33 1.7 - - 0.717 - - 0.983 - - -
8. PACRG ENSDARG00000087556 7 1.686 - - - 0.860 0.826 - - - - PARK2 co-regulated [Source:ZFIN;Acc:ZDB-GENE-041114-100]
9. TMEM57 TMEM57 260 1.659 - - - 0.747 - 0.912 - - -
10. CU633857.1 ENSDARG00000115315 21 1.601 - - - 0.860 - - - - 0.741 multiciliate differentiation and DNA synthesis associated cell cycle protein [Source:NCBI gene;Acc:100537904]
11. KCNAB2 KCNAB2 129 1.537 - - - - 0.773 0.764 - - -
12. KCNJ3_1 KCNJ3_1 30 1 - - - - - 1.000 - - -
13. grik4 ENSDARG00000026753 22 0.997 - - - - - 0.997 - - - glutamate receptor, ionotropic, kainate 4 [Source:ZFIN;Acc:ZDB-GENE-070821-5]
14. CABZ01030262.1 CABZ01030262.1 11 0.993 - - - - - 0.993 - - -
15. atat1 ENSDARG00000004472 700 0.993 - - - - - 0.993 - - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
16. CNTNAP1 ENSDARG00000074524 73 0.993 - - - - - 0.993 - - - contactin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030916-2]
17. slc8a4a ENSDARG00000055154 90 0.993 - - - - - 0.993 - - - solute carrier family 8 (sodium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-060110-2]
18. TRPC4_1 TRPC4_1 212 0.993 - - - - - 0.993 - - -
19. GRIN2B GRIN2B 140 0.993 - - - - - 0.993 - - -
20. zgc:73349 zgc:73349 4 0.991 - - - - - 0.991 - - -
21. retsatl ENSDARG00000034989 41 0.991 - - - - - 0.991 - - - retinol saturase (all-trans-retinol 13,14-reductase) like [Source:ZFIN;Acc:ZDB-GENE-051113-252]
22. zgc:193807 ENSDARG00000076652, ENSDARG00000105440 34 0.991 - - - - - 0.991 - - - zgc:193807 [Source:ZFIN;Acc:ZDB-GENE-081022-42]
23. CABZ01079192.1 ENSDARG00000101629 23 0.991 - - - - - 0.991 - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
24. nrn1b ENSDARG00000042656 44 0.991 - - - - - 0.991 - - - neuritin 1b [Source:ZFIN;Acc:ZDB-GENE-041010-98]
25. irgf1 ENSDARG00000070774 7 0.991 - - - - - 0.991 - - - immunity-related GTPase family, f1 [Source:ZFIN;Acc:ZDB-GENE-051212-5]
26. si:dkey-192k22.2 ENSDARG00000095111 4 0.991 - - - - - 0.991 - - - si:dkey-192k22.2 [Source:ZFIN;Acc:ZDB-GENE-090313-219]
27. ftr03 8 0.991 - - - - - 0.991 - - - finTRIM family, member 3
28. pdk2 pdk2 32 0.991 - - - - - 0.991 - - -
29. U1_55 U1_55 4 0.991 - - - - - 0.991 - - -
30. sdr42e1 ENSDARG00000098838 25 0.991 - - - - - 0.991 - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:ZFIN;Acc:ZDB-GENE-051120-63]
31. scpp5 ENSDARG00000078622 15 0.991 - - - - - 0.991 - - - secretory calcium-binding phosphoprotein 5 [Source:ZFIN;Acc:ZDB-GENE-090313-256]
32. PFKFB1 ENSDARG00000037140 5 0.991 - - - - - 0.991 - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5664]
33. slc35a5 ENSDARG00000000001 17 0.991 - - - - - 0.991 - - - solute carrier family 35, member A5 [Source:ZFIN;Acc:ZDB-GENE-030616-55]
34. pcdh2g6 9 0.991 - - - - - 0.991 - - - protocadherin 2 gamma 6
35. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 0.991 - - - - - 0.991 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
36. PLCXD2 ENSDARG00000058200 8 0.991 - - - - - 0.991 - - - phosphatidylinositol-specific phospholipase C, X domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-217]
37. zgc:154142 ENSDARG00000100792 42 0.991 - - - - - 0.991 - - - zgc:154142 [Source:ZFIN;Acc:ZDB-GENE-070615-2]
38. ATXN1L ENSDARG00000086977 4 0.991 - - - - - 0.991 - - - ataxin 1-like [Source:ZFIN;Acc:ZDB-GENE-090908-1]
39. pglyrp5 ENSDARG00000068382, ENSDARG00000112609 120 0.991 - - - - - 0.991 - - - peptidoglycan recognition protein 5 [Source:ZFIN;Acc:ZDB-GENE-050419-71]
40. CU062667.1 CU062667.1 4 0.991 - - - - - 0.991 - - -
41. AL953879.1 AL953879.1 5 0.991 - - - - - 0.991 - - -
42. si:ch211-213a13.2 ENSDARG00000074546, ENSDARG00000093024 5 0.991 - - - - - 0.991 - - - si:ch211-213a13.2 [Source:ZFIN;Acc:ZDB-GENE-050208-551]
43. CABZ01062083.1 CABZ01062083.1 40 0.991 - - - - - 0.991 - - -
44. opn4.1 ENSDARG00000007553 66 0.99 - - - - - 0.990 - - - opsin 4.1 [Source:ZFIN;Acc:ZDB-GENE-030314-2]
45. ADORA1 ADORA1 8 0.99 - - - - - 0.990 - - -
46. BX323449.2 BX323449.2 50 0.99 - - - - - 0.990 - - -
47. ENSDARG00000086878 ENSDARG00000086878 332 0.989 - - - - - 0.989 - - -
48. AVL9 ENSDARG00000055538 329 0.989 - - - - - 0.989 - - - AVL9 homolog (S. cerevisiase) [Source:ZFIN;Acc:ZDB-GENE-060825-261]
49. DLK1 60 0.989 - - - - - 0.989 - - - delta like non-canonical Notch ligand 1
50. PARM1 ENSDARG00000114063 58 0.989 - - - - - 0.989 - - - prostate androgen-regulated mucin-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-262]
51. GPC6 GPC6 4 0.988 - - - - - 0.988 - - -
52. sgms2 57 0.988 - - - - - 0.988 - - - sphingomyelin synthase 2, transcript variant X1
53. si:ch211-223f7.1 si:ch211-223f7.1 38 0.988 - - - - - 0.988 - - -
54. CABZ01044814.2 CABZ01044814.2 25711 0.988 - - - - - 0.988 - - -
55. CAMK1 CAMK1 28 0.988 - - - - - 0.988 - - -
56. CT955963.1 ENSDARG00000100370 23 0.988 - - - - - 0.988 - - -
57. si:dkey-22o22.2 ENSDARG00000102445 149 0.987 - - - - - 0.987 - - - si:dkey-22o22.2 [Source:ZFIN;Acc:ZDB-GENE-100922-84]
58. kctd1 ENSDARG00000074056 652 0.987 - - - - - 0.987 - - - potassium channel tetramerization domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040724-194]
59. RAC1_2 RAC1_2 51 0.986 - - - - - 0.986 - - -
60. nitr3c ENSDARG00000057620, ENSDARG00000077998, ENSDARG00000111724 96 0.986 - - - - - 0.986 - - - novel immune-type receptor 3c [Source:ZFIN;Acc:ZDB-GENE-041001-13]
61. pstpip1a ENSDARG00000060860 23 0.985 - - - - - 0.985 - - - proline-serine-threonine phosphatase interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-050419-251]
62. synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 0.985 - - - - - 0.985 - - - synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]
63. BX470254.1_1 ENSDARG00000097402 50 0.984 - - - - - 0.984 - - -
64. htr3a ENSDARG00000089212 51 0.984 - - - - - 0.984 - - - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
65. mir10b-2 116 0.984 - - - - - 0.984 - - - microRNA 10b-2
66. zgc:153845 62 0.984 - - - - - 0.984 - - - zgc:153845
67. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 0.984 - - - - - 0.984 - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
68. gpr157 ENSDARG00000034975, ENSDARG00000115075 61 0.984 - - - - - 0.984 - - - G protein-coupled receptor 157 [Source:ZFIN;Acc:ZDB-GENE-050809-126]
69. arl16 ENSDARG00000059498, ENSDARG00000110386 229 0.983 - - - - - 0.983 - - - ADP-ribosylation factor-like 16 [Source:ZFIN;Acc:ZDB-GENE-070410-114]
70. smpd5 ENSDARG00000059811, ENSDARG00000117140 60 0.983 - - - - - 0.983 - - - sphingomyelin phosphodiesterase 5 [Source:ZFIN;Acc:ZDB-GENE-061110-22]
71. msxe msxe 362 0.983 - - - - - 0.983 - - -
72. kcng1 ENSDARG00000099038 23 0.983 - - - - - 0.983 - - - potassium voltage-gated channel, subfamily G, member 1 [Source:ZFIN;Acc:ZDB-GENE-080220-5]
73. SNORA57 SNORA57 148 0.982 - - - - - 0.982 - - -
74. CT030712.1 ENSDARG00000044355 83 0.982 - - - - - 0.982 - - - uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
75. NPFFR1 ENSDARG00000111997 29 0.982 - - - - - 0.982 - - - neuropeptide FF receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8106]
76. KCNIP4 ENSDARG00000088100 86 0.982 - - - - - 0.982 - - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
77. kif3cb ENSDARG00000079500 935 0.982 - - - - - 0.982 - - - kinesin family member 3Cb [Source:ZFIN;Acc:ZDB-GENE-080709-4]
78. DUSP19 DUSP19 10 0.982 - - - - - 0.982 - - -
79. PKN1 PKN1 42 0.981 - - - - - 0.981 - - -
80. kitlga ENSDARG00000070917 155 0.981 - - - - - 0.981 - - - kit ligand a [Source:ZFIN;Acc:ZDB-GENE-070424-1]
81. entpd2b ENSDARG00000044795 7 0.981 - - - - - 0.981 - - - ectonucleoside triphosphate diphosphohydrolase 2b [Source:ZFIN;Acc:ZDB-GENE-061013-2]
82. si:rp71-36a1.1 ENSDARG00000095295 13 0.98 - - - - - 0.980 - - - si:rp71-36a1.1 [Source:ZFIN;Acc:ZDB-GENE-050208-407]
83. si:dkey-51d8.11 8 0.98 - - - - - 0.980 - - - si:dkey-51d8.11, transcript variant X6
84. BX004890.2 BX004890.2 84 0.98 - - - - - 0.980 - - -
85. CU463790.1 CU463790.1 60 0.98 - - - - - 0.980 - - -
86. si:dkey-81p22.11 ENSDARG00000093797 68 0.98 - - - - - 0.980 - - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
87. atpv0e2 ENSDARG00000059057 585 0.98 - - - - - 0.980 - - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
88. RAPH1 RAPH1 294 0.98 - - - - - 0.980 - - -
89. CR407547.1 ENSDARG00000117572 41 0.98 - - - - - 0.980 - - -
90. zgc:113274 ENSDARG00000059235, ENSDARG00000116981 19 0.979 - - - - - 0.979 - - - zgc:113274 [Source:ZFIN;Acc:ZDB-GENE-050508-2]
91. KCNS1 KCNS1 24 0.979 - - - - - 0.979 - - -
92. KLHL14 ENSDARG00000045275 155 0.978 - - - - - 0.978 - - - kelch-like family member 14 [Source:ZFIN;Acc:ZDB-GENE-091204-223]
93. fgf18b ENSDARG00000043962, ENSDARG00000112937 29 0.978 - - - - - 0.978 - - - fibroblast growth factor 18b [Source:ZFIN;Acc:ZDB-GENE-050221-4]
94. uros ENSDARG00000027491 1147 0.978 - - - - - 0.978 - - - uroporphyrinogen III synthase [Source:ZFIN;Acc:ZDB-GENE-040323-2]
95. slc25a23b ENSDARG00000024708 51 0.978 - - - - - 0.978 - - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23b [Source:ZFIN;Acc:ZDB-GENE-040724-220]
96. C5H3orf30 C5H3orf30 63 0.977 - - - - - 0.977 - - -
97. CLDN20 26 0.977 - - - - - 0.977 - - - claudin 20, transcript variant X2
98. ppp2r2ba 321 0.977 - - - - - 0.977 - - - protein phosphatase 2, regulatory subunit B, beta a, transcript variant X2
99. fgf17 ENSDARG00000102778 136 0.976 - - - - - 0.976 - - - fibroblast growth factor 17 [Source:ZFIN;Acc:ZDB-GENE-040621-1]
100. C4H12orf45 C4H12orf45 483 0.976 - - - - - 0.976 - - -

There are 1257 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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