Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for lsm7

Gene Name Gene ID Reads Annotation
lsm7 ENSDARG00000058328 7191 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-030131-8284]










Genes with expression patterns similar to lsm7

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lsm7 ENSDARG00000058328 7191 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-030131-8284]
2. kansl3 ENSDARG00000029556 2487 3.323 - 0.891 - - 0.822 - 0.864 - 0.746 KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
3. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 3.255 - 0.821 - - 0.791 - 0.853 - 0.790 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
4. lmnb1 ENSDARG00000044299 9817 2.614 0.913 0.813 0.888 - - - - - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
5. psma4 ENSDARG00000045928 5112 2.59 0.883 0.927 - - - - - - 0.780 proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
6. safb ENSDARG00000020467 5608 2.563 - - 0.888 - - - 0.898 - 0.777 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
7. snrnp70 ENSDARG00000077126 5921 2.554 0.866 - - - 0.830 - 0.858 - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
8. eif2ak3 ENSDARG00000062139 3276 2.505 0.769 0.886 - - - - 0.850 - - eukaryotic translation initiation factor 2-alpha kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050414-2]
9. si:ch211-22i13.2 ENSDARG00000043485 4719 2.499 0.851 - - - 0.808 - 0.840 - - si:ch211-22i13.2 [Source:ZFIN;Acc:ZDB-GENE-041014-143]
10. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 2.439 - 0.874 0.795 - - - - - 0.770 pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
11. lypla2 ENSDARG00000053656 8971 2.434 0.804 - 0.870 - - - - - 0.760 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
12. kif11 ENSDARG00000010948 4973 2.433 - - - - 0.854 0.778 - - 0.801 kinesin family member 11 [Source:ZFIN;Acc:ZDB-GENE-020426-1]
13. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 2.429 0.809 - 0.897 - - - - - 0.723 PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
14. kpna2 ENSDARG00000038066 7954 2.412 - - 0.852 - - - - 0.778 0.782 karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:ZFIN;Acc:ZDB-GENE-040718-22]
15. inppl1a ENSDARG00000104222 6256 2.38 0.743 - 0.770 - - - 0.867 - - inositol polyphosphate phosphatase-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3904]
16. lsm4 ENSDARG00000023852 6083 2.373 - 0.860 - - - 0.716 - - 0.797 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040426-1652]
17. nmt1a ENSDARG00000052966 5918 2.354 0.738 - - - - 0.717 0.899 - - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
18. ddx39ab ENSDARG00000015111 11619 2.348 - - 0.866 - - 0.774 - - 0.708 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
19. ube2i ube2i 13024 2.298 - - - 0.701 0.830 - - 0.767 -
20. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 2.275 - - 0.753 - 0.736 - - - 0.786 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
21. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 2.263 - - - - - - 0.848 0.701 0.714 structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
22. tnfaip3 ENSDARG00000027777 1066 2.261 - - 0.812 - - - - 0.731 0.718 tumor necrosis factor, alpha-induced protein 3 [Source:ZFIN;Acc:ZDB-GENE-100212-2]
23. purba ENSDARG00000068822 2537 1.819 - 0.913 - - - - 0.906 - - purine-rich element binding protein Ba [Source:ZFIN;Acc:ZDB-GENE-060531-100]
24. shroom4 ENSDARG00000079900 1852 1.788 - 0.921 - - - - 0.867 - - shroom family member 4 [Source:ZFIN;Acc:ZDB-GENE-041111-246]
25. cdc42 ENSDARG00000044573 11795 1.787 - - 0.876 - - - 0.911 - - cell division cycle 42 [Source:ZFIN;Acc:ZDB-GENE-030131-8783]
26. calm2b 3890 1.785 0.853 - - - - - 0.932 - - calmodulin 2b, (phosphorylase kinase, delta)
27. creb3l1 ENSDARG00000015793 1988 1.762 - 0.879 - - - - 0.883 - - cAMP responsive element binding protein 3-like 1 [Source:ZFIN;Acc:ZDB-GENE-030219-181]
28. ktn1 ENSDARG00000032802 6251 1.76 0.881 0.879 - - - - - - - kinectin 1 [Source:ZFIN;Acc:ZDB-GENE-030408-4]
29. jak1 ENSDARG00000020625, ENSDARG00000117102 5057 1.753 - 0.869 - - - - 0.884 - - Janus kinase 1 [Source:ZFIN;Acc:ZDB-GENE-980526-142]
30. magi1b ENSDARG00000003169 2056 1.751 0.875 0.876 - - - - - - - membrane associated guanylate kinase, WW and PDZ domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5110]
31. uqcc uqcc 4742 1.75 - 0.905 - - - - 0.845 - -
32. nusap1 ENSDARG00000002403 6953 1.75 - 0.912 0.838 - - - - - - nucleolar and spindle associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030827-5]
33. ik ENSDARG00000004161 3132 1.748 - 0.905 - - - - 0.843 - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
34. celsr1a ENSDARG00000069185 1894 1.742 - 0.867 - - - - 0.875 - - cadherin EGF LAG seven-pass G-type receptor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-78]
35. dlg5a ENSDARG00000074059 1834 1.74 0.867 0.873 - - - - - - - discs, large homolog 5a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-3149]
36. sltm ENSDARG00000052728 6234 1.732 0.867 - 0.865 - - - - - - SAFB-like, transcription modulator [Source:ZFIN;Acc:ZDB-GENE-040426-2647]
37. tars ENSDARG00000013250, ENSDARG00000110996, ENSDARG00000113759 4599 1.731 - 0.864 0.867 - - - - - - threonyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-041010-218]
38. fmnl2b ENSDARG00000075041 1744 1.73 - 0.873 0.857 - - - - - - formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
39. mycb ENSDARG00000007241 3988 1.724 - 0.857 - - - - 0.867 - - MYC proto-oncogene, bHLH transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-780]
40. c1galt1c1 ENSDARG00000036335 1623 1.723 - 0.905 0.818 - - - - - - C1GALT1-specific chaperone 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2772]
41. mccc2 ENSDARG00000017571 5635 1.718 0.885 - 0.833 - - - - - - methylcrotonoyl-CoA carboxylase 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040426-2493]
42. pygb ENSDARG00000002021, ENSDARG00000116450 1304 1.717 0.830 0.887 - - - - - - - phosphorylase, glycogen; brain [Source:ZFIN;Acc:ZDB-GENE-040928-2]
43. snx12 ENSDARG00000019060 9563 1.715 - - 0.911 - 0.804 - - - - sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]
44. chst11 ENSDARG00000034375 2701 1.713 - 0.873 - - - - 0.840 - - carbohydrate (chondroitin 4) sulfotransferase 11 [Source:ZFIN;Acc:ZDB-GENE-040315-1]
45. nme3 ENSDARG00000100990 3889 1.712 0.832 - - - 0.880 - - - - NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
46. ABI3_1 ABI3_1 511 1.71 - 0.894 - - - - 0.816 - -
47. kdm4b ENSDARG00000099675 2037 1.705 0.839 - - - - - 0.866 - - lysine (K)-specific demethylase 4B [Source:ZFIN;Acc:ZDB-GENE-060503-664]
48. cpsf1 ENSDARG00000034178 2036 1.704 - - 0.850 - - - 0.854 - - cleavage and polyadenylation specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040709-2]
49. abl1 ENSDARG00000035187 3553 1.699 - - - - 0.817 - 0.882 - - c-abl oncogene 1, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-100812-9]
50. srrm2 ENSDARG00000037965 1967 1.699 - - 0.829 - - - 0.870 - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
51. gigfy2 3194 1.697 - - 0.824 - - - 0.873 - - GRB10 interacting GYF protein 2, transcript variant X1
52. etf1 etf1 12861 1.695 - - 0.854 - 0.841 - - - -
53. cks1b ENSDARG00000007971 2739 1.694 - - 0.867 - 0.827 - - - - CDC28 protein kinase regulatory subunit 1B [Source:ZFIN;Acc:ZDB-GENE-040801-112]
54. marveld1 ENSDARG00000011724 1025 1.693 - 0.874 - - 0.819 - - - - MARVEL domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-33]
55. alcama ENSDARG00000026531, ENSDARG00000116648 6938 1.693 - 0.913 0.780 - - - - - - activated leukocyte cell adhesion molecule a [Source:ZFIN;Acc:ZDB-GENE-990415-30]
56. cactin ENSDARG00000059866 553 1.693 - 0.877 0.816 - - - - - - cactin [Source:ZFIN;Acc:ZDB-GENE-060503-322]
57. tyms ENSDARG00000042894 3068 1.691 - - - - 0.833 - 0.858 - - thymidylate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-59]
58. cdc14b ENSDARG00000021483 4958 1.69 - - - - 0.830 - 0.860 - - cell division cycle 14B [Source:ZFIN;Acc:ZDB-GENE-040426-820]
59. lzic ENSDARG00000055899 638 1.688 0.859 - - - - - 0.829 - - leucine zipper and CTNNBIP1 domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-342]
60. atp6v1c1b ENSDARG00000035880, ENSDARG00000112507 1869 1.686 - 0.859 - - - - 0.827 - - ATPase H+ transporting V1 subunit C1b [Source:ZFIN;Acc:ZDB-GENE-041010-104]
61. clstn1 ENSDARG00000031720 5286 1.683 - 0.895 0.788 - - - - - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
62. mxd3 ENSDARG00000098350 3040 1.682 - 0.927 - - - - - - 0.755 MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
63. eny2 ENSDARG00000070046 3741 1.682 - - - - - - 0.912 - 0.770 enhancer of yellow 2 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040718-124]
64. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.677 - 0.880 - - - - - - 0.797 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
65. etfa ENSDARG00000101631 2946 1.675 0.838 - - - - - 0.837 - - electron transfer flavoprotein subunit alpha [Source:ZFIN;Acc:ZDB-GENE-030131-4449]
66. ap1b1 ENSDARG00000020621 3874 1.674 - - - - 0.818 - 0.856 - - adaptor related protein complex 1 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-061025-1]
67. rnf11a ENSDARG00000010442 592 1.674 0.852 - - - 0.822 - - - - ring finger protein 11a [Source:ZFIN;Acc:ZDB-GENE-040426-1277]
68. klc2 3058 1.671 - - - - 0.824 - 0.847 - - kinesin light chain 2
69. igf2r ENSDARG00000006094 1578 1.67 0.770 0.900 - - - - - - - insulin-like growth factor 2 receptor [Source:ZFIN;Acc:ZDB-GENE-041014-300]
70. hadhab ENSDARG00000060594 3664 1.67 0.844 - 0.826 - - - - - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-041111-204]
71. ranbp1 ENSDARG00000014817 3371 1.667 - 0.899 - - - - - - 0.768 RAN binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2548]
72. abat ENSDARG00000006031 2143 1.663 0.761 0.902 - - - - - - - 4-aminobutyrate aminotransferase [Source:ZFIN;Acc:ZDB-GENE-031006-4]
73. pycard ENSDARG00000040076 3956 1.66 - 0.871 0.789 - - - - - - PYD and CARD domain containing [Source:ZFIN;Acc:ZDB-GENE-000511-2]
74. eftud2 ENSDARG00000012261 3081 1.66 - - - - - - 0.881 - 0.779 elongation factor Tu GTP binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1569]
75. rybpb ENSDARG00000053459 1464 1.658 - - 0.812 - - - 0.846 - - RING1 and YY1 binding protein b [Source:ZFIN;Acc:ZDB-GENE-061103-96]
76. zgc:162816 ENSDARG00000070416 974 1.657 - - - - 0.829 - 0.828 - - zgc:162816 [Source:ZFIN;Acc:ZDB-GENE-070410-94]
77. znf346 ENSDARG00000060695 3942 1.657 - 0.917 - - - - - - 0.740 zinc finger protein 346 [Source:ZFIN;Acc:ZDB-GENE-070209-152]
78. zc3h18 ENSDARG00000062506 1676 1.656 - - 0.816 - - - 0.840 - - zinc finger CCCH-type containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-13]
79. bag1 ENSDARG00000020895 1660 1.656 0.835 - - - 0.821 - - - - BCL2 associated athanogene 1 [Source:ZFIN;Acc:ZDB-GENE-050309-89]
80. mrpl37 ENSDARG00000062916 1600 1.655 0.839 - 0.816 - - - - - - mitochondrial ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-050309-20]
81. csnk1da ENSDARG00000008370 3469 1.655 - 0.940 - - - 0.715 - - - casein kinase 1, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-825]
82. hddc2 ENSDARG00000034957 905 1.654 0.760 0.894 - - - - - - - HD domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050522-394]
83. zgc:101663 ENSDARG00000037852 830 1.653 0.746 0.907 - - - - - - - zgc:101663 [Source:ZFIN;Acc:ZDB-GENE-041114-149]
84. COL13A1 1565 1.652 0.844 - - - - - 0.808 - - collagen, type XIII, alpha 1, transcript variant X1
85. UBE2D2 ENSDARG00000043484 11723 1.651 - - - - - - 0.917 0.734 - ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-120312-1]
86. cd82a ENSDARG00000019098 6761 1.65 - - - - - 0.762 0.888 - - CD82 molecule a [Source:ZFIN;Acc:ZDB-GENE-030131-2818]
87. zranb2 ENSDARG00000044332 6723 1.649 - - 0.862 - - - - - 0.787 zinc finger, RAN-binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2743]
88. CABZ01092303.1 CABZ01092303.1 8825 1.649 0.801 0.848 - - - - - - -
89. lbr ENSDARG00000014013 4835 1.647 0.899 - - - - - - - 0.748 lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
90. cdh2 ENSDARG00000018693, ENSDARG00000117201 9869 1.645 - - - - - - 0.851 - 0.794 cadherin 2, type 1, N-cadherin (neuronal) [Source:ZFIN;Acc:ZDB-GENE-990415-171]
91. prps1b ENSDARG00000037506, ENSDARG00000110507 4170 1.641 - - - - 0.825 - - - 0.816 phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]
92. rab11ba ENSDARG00000041878 4651 1.641 - - - - 0.781 - 0.860 - - RAB11B, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040426-2860]
93. rad51 ENSDARG00000041411, ENSDARG00000111948 1056 1.641 - - 0.825 - - - 0.816 - - RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426-2286]
94. DALRD3 ENSDARG00000068602 3062 1.64 - 0.912 0.728 - - - - - - DALR anticodon binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-061103-415]
95. BAZ2B BAZ2B 3285 1.639 0.773 0.866 - - - - - - -
96. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1.639 - - 0.813 - 0.826 - - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
97. polr2d ENSDARG00000076509 3386 1.638 0.789 - 0.849 - - - - - - polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
98. cldnf ENSDARG00000043133 1006 1.638 0.781 0.857 - - - - - - - claudin f [Source:ZFIN;Acc:ZDB-GENE-010328-6]
99. brap ENSDARG00000008560 821 1.637 0.835 - 0.802 - - - - - - BRCA1 associated protein [Source:ZFIN;Acc:ZDB-GENE-040718-168]
100. tmem55a 1331 1.636 0.878 - - - - 0.758 - - - transmembrane protein 55A

There are 1747 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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