Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for lsm10

Gene Name Gene ID Reads Annotation
lsm10 5 LSM10, U7 small nuclear RNA associated










Genes with expression patterns similar to lsm10

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lsm10 5 5 - 1.000 - 1.000 1.000 - - 1.000 1.000 LSM10, U7 small nuclear RNA associated
2. sowahca ENSDARG00000098790 1 2 - 1.000 - - - - - - 1.000 sosondowah ankyrin repeat domain family Ca [Source:ZFIN;Acc:ZDB-GENE-081104-106]
3. tyro3 ENSDARG00000005356 4 2 - - - 1.000 - - - - 1.000 TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
4. CABZ01085979.1 CABZ01085979.1 4 1.985 - 1.000 - - 0.985 - - - -
5. zgc:66455 ENSDARG00000052375 3 1.98 - 1.000 - - 0.980 - - - - zgc:66455 [Source:ZFIN;Acc:ZDB-GENE-040426-1642]
6. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 1.979 - 1.000 - 0.979 - - - - -
7. ABCC6 ABCC6 5 1.966 - 1.000 - - 0.966 - - - -
8. si:ch73-92e20.2 si:ch73-92e20.2 2 1.858 - 1.000 - - - - - - 0.858
9. SNORD59 SNORD59 7 1.795 - 1.000 - - - - - - 0.795
10. grik5 ENSDARG00000101449, ENSDARG00000111384 75 1.784 - 0.865 - - 0.919 - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
11. ccbl2 4 1.746 - - - - - - - 0.746 1.000 cysteine conjugate-beta lyase 2, transcript variant X4
12. fam219b ENSDARG00000104637 3 1.746 - 1.000 - - - - - 0.746 - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
13. si:dkey-14o6.7 si:dkey-14o6.7 9 1.746 - 1.000 - - - - - 0.746 -
14. CT025887.1 ENSDARG00000114574 1 1.746 - - - - - - - 0.746 1.000 uncharacterized LOC110440185 [Source:NCBI gene;Acc:110440185]
15. BX323064.1 ENSDARG00000099914 11 1.712 - - - - 0.966 - - 0.746 -
16. si:dkey-224b4.5 3 1.599 - - - - 0.853 - - 0.746 - si:dkey-224b4.5, transcript variant X5
17. zgc:66483 ENSDARG00000099612 10 1.525 - - - - 0.730 - - - 0.795 zgc:66483 [Source:ZFIN;Acc:ZDB-GENE-030131-5765]
18. dapk3 ENSDARG00000074447 12 1.515 - 0.732 - - - - - - 0.783 death-associated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3026]
19. FAM120A ENSDARG00000075021 73 1.433 - 0.726 - 0.707 - - - - - family with sequence similarity 120A [Source:ZFIN;Acc:ZDB-GENE-110131-10]
20. CIR1 ENSDARG00000099733 66 1 - 1.000 - - - - - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
21. lhx5 ENSDARG00000057936 785 1 - 1.000 - - - - - - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
22. ZNF135_2 ZNF135_2 27 1 - 1.000 - - - - - - -
23. pcbp3 ENSDARG00000054378 74 1 - 1.000 - - - - - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
24. aatkb ENSDARG00000104442 392 1 - 1.000 - - - - - - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
25. FAM163A_1 ENSDARG00000093021 6 1 - - - - - - - - 1.000 family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
26. MFAP4_2 MFAP4_2 592 1 - 1.000 - - - - - - -
27. si:dkey-71h2.2 ENSDARG00000043394 11 1 - 1.000 - - - - - - - si:dkey-71h2.2 [Source:ZFIN;Acc:ZDB-GENE-041014-145]
28. pycr1 pycr1 1258 1 - 1.000 - - - - - - -
29. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 1 - 1.000 - - - - - - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
30. PRR12 PRR12 38 1 - 1.000 - - - - - - -
31. epm2a ENSDARG00000059044 10 1 - - - - - - - - 1.000 epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) [Source:ZFIN;Acc:ZDB-GENE-100922-143]
32. actl6b ENSDARG00000034107 9 1 - 1.000 - - - - - - - actin-like 6B [Source:ZFIN;Acc:ZDB-GENE-050522-191]
33. lcp2b ENSDARG00000036215 15 1 - 1.000 - - - - - - - lymphocyte cytosolic protein 2b [Source:ZFIN;Acc:ZDB-GENE-081107-21]
34. cldnd ENSDARG00000006580 17 1 - 1.000 - - - - - - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
35. BX537120.1 ENSDARG00000109968 0 1 - 1.000 - - - - - - -
36. UHRF2_1 UHRF2_1 2 1 - 1.000 - - - - - - -
37. zgc:165409_1 ENSDARG00000091385 65 1 - 1.000 - - - - - - - zgc:165409 [Source:ZFIN;Acc:ZDB-GENE-070615-19]
38. ERAP1 ERAP1 0 1 - 1.000 - - - - - - -
39. zgc:171759_1 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 1 1 - - - - - - - - 1.000 zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
40. CABZ01079192.1 ENSDARG00000101629 23 1 - 1.000 - - - - - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
41. msgn1 ENSDARG00000070546 188 1 - 1.000 - - - - - - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
42. zgc:152698 32 1 - 1.000 - - - - - - - zgc:152698
43. si:ch211-232k18.2 si:ch211-232k18.2 2 1 - - - - - - - - 1.000
44. palmda ENSDARG00000001913 26 1 - - - 1.000 - - - - - palmdelphin a [Source:ZFIN;Acc:ZDB-GENE-070705-48]
45. si:ch211-122l14.8 si:ch211-122l14.8 4 1 - 1.000 - - - - - - -
46. fibpb ENSDARG00000087666 0 1 - - - - - - - - 1.000 fibroblast growth factor (acidic) intracellular binding protein b [Source:ZFIN;Acc:ZDB-GENE-040630-2]
47. ZNF337_16 ZNF337_16 22 1 - 1.000 - - - - - - -
48. FAM117B FAM117B 225 1 - 1.000 - - - - - - -
49. nosip ENSDARG00000037958, ENSDARG00000112335 59 1 - 1.000 - - - - - - - nitric oxide synthase interacting protein [Source:ZFIN;Acc:ZDB-GENE-041114-146]
50. zgc:112242 11 1 - - - 1.000 - - - - - zgc:112242
51. si:ch1073-143l10.2 ENSDARG00000094899 32 1 - 1.000 - - - - - - - si:ch1073-143l10.2 [Source:ZFIN;Acc:ZDB-GENE-030131-863]
52. trim35-24 ENSDARG00000099684, ENSDARG00000114154 4 1 - - - - - - - - 1.000 tripartite motif containing 35-24 [Source:ZFIN;Acc:ZDB-GENE-060421-8366]
53. cx39.4 ENSDARG00000070357 17 1 - - - 1.000 - - - - - connexin 39.4 [Source:ZFIN;Acc:ZDB-GENE-050616-6]
54. si:dkey-273e13.2 si:dkey-273e13.2 0 1 - 1.000 - - - - - - -
55. RNF207 RNF207 9 1 - - - - - - - - 1.000
56. galr1 galr1 9 1 - 1.000 - - - - - - -
57. cacna2d2 cacna2d2 16 1 - - - 1.000 - - - - -
58. BX470131.1 BX470131.1 86 1 - 1.000 - - - - - - -
59. GABRA3 ENSDARG00000090883 5 1 - 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
60. SRR_1 SRR_1 0 1 - 1.000 - - - - - - -
61. MLLT4 MLLT4 67 1 - 1.000 - - - - - - -
62. slc25a29 ENSDARG00000057352 9 1 - 1.000 - - - - - - - solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 [Source:ZFIN;Acc:ZDB-GENE-050913-70]
63. zgc:112994 ENSDARG00000026296 5 1 - 1.000 - - - - - - - zgc:112994 [Source:ZFIN;Acc:ZDB-GENE-050522-519]
64. fam5b fam5b 45 1 - 1.000 - - - - - - -
65. CABZ01044346.1 CABZ01044346.1 12 1 - - - 1.000 - - - - -
66. dmrt1 ENSDARG00000007349 16 1 - 1.000 - - - - - - - doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]
67. abcc9 ENSDARG00000015985 20 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-23]
68. alp3 ENSDARG00000098063 0 1 - 1.000 - - - - - - - alkaline phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-120919-1]
69. si:dkeyp-106c3.1 ENSDARG00000090623 225 1 - 1.000 - - - - - - - si:dkeyp-106c3.1 [Source:ZFIN;Acc:ZDB-GENE-050411-73]
70. ZNF337_11 ZNF337_11 11 1 - 1.000 - - - - - - -
71. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1 - 1.000 - - - - - - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
72. SNORA31 SNORA31 23 1 - 1.000 - - - - - - -
73. si:dkey-233e3.4 si:dkey-233e3.4 3 1 - 1.000 - - - - - - -
74. CU459152.1 CU459152.1 407 1 - 1.000 - - - - - - -
75. MFAP4_7 MFAP4_7 43 1 - 1.000 - - - - - - -
76. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1 - - - - - - - - 1.000 purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
77. CABZ01073954.1 CABZ01073954.1 258 1 - 1.000 - - - - - - -
78. U5_4 U5_4 1 1 - - - - - - - - 1.000
79. cyp27a7 ENSDARG00000033802 216 1 - 1.000 - - - - - - - cytochrome P450, family 27, subfamily A, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-081104-519]
80. PTGR2 ENSDARG00000070673 43 1 - 1.000 - - - - - - - prostaglandin reductase 2 [Source:ZFIN;Acc:ZDB-GENE-050506-71]
81. CT573264.3 CT573264.3 0 1 - - - - - - - - 1.000
82. si:dkey-24p1.7 ENSDARG00000089404 7 1 - 1.000 - - - - - - - si:dkey-24p1.7 [Source:ZFIN;Acc:ZDB-GENE-121214-215]
83. sergef ENSDARG00000070986, ENSDARG00000111782 48 1 - 1.000 - - - - - - - secretion regulating guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-061220-11]
84. chrna6 ENSDARG00000055559 60 1 - 1.000 - - - - - - - cholinergic receptor, nicotinic, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-090312-91]
85. klhl42 ENSDARG00000006011 46 1 - 1.000 - - - - - - - kelch-like family, member 42 [Source:ZFIN;Acc:ZDB-GENE-041210-190]
86. pdlim3a ENSDARG00000011023, ENSDARG00000115861 3 1 - - - 1.000 - - - - - PDZ and LIM domain 3a [Source:ZFIN;Acc:ZDB-GENE-050505-1]
87. MCMDC2 0 1 - 1.000 - - - - - - - minichromosome maintenance domain containing 2, transcript variant X2
88. mgat4c ENSDARG00000041791, ENSDARG00000109972 0 1 - - - - - - - - 1.000 mgat4 family member C [Source:ZFIN;Acc:ZDB-GENE-091204-429]
89. SDR16C5 SDR16C5 34 1 - 1.000 - - - - - - -
90. b3galtla b3galtla 111 1 - 1.000 - - - - - - -
91. BX321870.1 ENSDARG00000098519 9 1 - 1.000 - - - - - - -
92. CABZ01023601.1 CABZ01023601.1 1 1 - 1.000 - - - - - - -
93. CU457778.1 ENSDARG00000098976 38 1 - 1.000 - - - - - - - uncharacterized LOC100535115 [Source:NCBI gene;Acc:100535115]
94. BX005294.2 ENSDARG00000109361 3 1 - 1.000 - - - - - - -
95. si:ch211-207e19.16 si:ch211-207e19.16 3 1 - - - 1.000 - - - - -
96. si:ch211-76l23.6 si:ch211-76l23.6 68 1 - - - 1.000 - - - - -
97. neu3.1 ENSDARG00000096382 9 1 - 1.000 - - - - - - - sialidase 3 (membrane sialidase), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-061201-39]
98. HYKK_1 HYKK_1 4 1 - 1.000 - - - - - - -
99. cdh18 cdh18 64 1 - 1.000 - - - - - - -
100. OTUD7A ENSDARG00000045556 1 1 - - - - - - - - 1.000 OTU deubiquitinase 7A [Source:HGNC Symbol;Acc:HGNC:20718]

There are 572 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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