Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lrwd1

Gene Name Gene ID Reads Annotation
lrwd1 ENSDARG00000035147 464 leucine-rich repeats and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5335]










Genes with expression patterns similar to lrwd1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrwd1 ENSDARG00000035147 464 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine-rich repeats and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5335]
2. si:ch211-165d12.4 ENSDARG00000079353 330 2.246 - 0.734 - - - 0.793 0.719 - - si:ch211-165d12.4 [Source:ZFIN;Acc:ZDB-GENE-080303-7]
3. anapc4 ENSDARG00000032237 385 1.753 - - - - - 0.932 0.821 - - anaphase promoting complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-041212-10]
4. ism2 ism2 153 1.723 - - - - - 0.902 - 0.821 -
5. CABZ01085657.1 CABZ01085657.1 23 1.683 - 0.774 - - - 0.909 - - -
6. AKR1C1 AKR1C1 32 1.674 - - - - - 0.918 0.756 - -
7. KDM5A ENSDARG00000104567 450 1.671 - - - - - 0.897 - 0.774 - lysine (K)-specific demethylase 5A [Source:ZFIN;Acc:ZDB-GENE-150114-1]
8. adat2 ENSDARG00000041944 212 1.653 - - - - - 0.908 0.745 - - adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041014-360]
9. CR677591.1 CR677591.1 19 1.636 - 0.727 - - - 0.909 - - -
10. znf511 ENSDARG00000000760 446 1.634 - - - - - 0.772 - 0.862 - zinc finger protein 511 [Source:ZFIN;Acc:ZDB-GENE-030616-621]
11. traf3ip1 ENSDARG00000010300 69 1.626 - 0.750 - - - 0.876 - - - TNF receptor-associated factor 3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1146]
12. zgc:171727 ENSDARG00000105781 350 1.625 - 0.731 - - - 0.894 - - - zgc:171727 [Source:ZFIN;Acc:ZDB-GENE-071004-26]
13. BX000999.4 BX000999.4 206 1.606 - 0.829 - - - - 0.777 - -
14. ttc5 ENSDARG00000013329, ENSDARG00000113967 219 1.569 - - - - - 0.785 - 0.784 - tetratricopeptide repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-050417-137]
15. si:dkey-262g12.4 si:dkey-262g12.4 144 1.569 - - - - - 0.847 0.722 - -
16. fzd5 ENSDARG00000025420 1082 1.56 - 0.807 - - - - 0.753 - - frizzled class receptor 5 [Source:ZFIN;Acc:ZDB-GENE-990415-218]
17. mycn ENSDARG00000006837 1616 1.546 - - 0.748 - - - 0.798 - - MYCN proto-oncogene, bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-020711-1]
18. si:ch73-196k8.2 si:ch73-196k8.2 427 1.537 - - - - - - 0.789 0.748 -
19. zgc:174862 ENSDARG00000077571 201 1.535 - - - - - - 0.764 0.771 - zgc:174862 [Source:ZFIN;Acc:ZDB-GENE-080303-29]
20. rangrf ENSDARG00000098786 375 1.528 - 0.782 - - - - - 0.746 - RAN guanine nucleotide release factor [Source:ZFIN;Acc:ZDB-GENE-060526-143]
21. acsbg1 ENSDARG00000062077 2020 1.527 - - - - - 0.816 0.711 - - acyl-CoA synthetase bubblegum family member 1 [Source:ZFIN;Acc:ZDB-GENE-110914-219]
22. dvl2 ENSDARG00000056184 1525 1.52 - 0.728 - 0.792 - - - - - dishevelled segment polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-041118-20]
23. efcab11 ENSDARG00000043740 178 1.52 - 0.720 - - - 0.800 - - - EF-hand calcium binding domain 11 [Source:ZFIN;Acc:ZDB-GENE-050417-348]
24. slc25a18 ENSDARG00000070717 787 1.517 - - - - - 0.771 0.746 - - solute carrier family 25 (glutamate carrier), member 18 [Source:ZFIN;Acc:ZDB-GENE-041111-192]
25. SERTAD4 ENSDARG00000089795 791 1.514 - - - - - 0.787 0.727 - - SERTA domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-090313-199]
26. si:dkey-23a17.1 si:dkey-23a17.1 15 1.513 - 0.705 - - - 0.808 - - -
27. lipea ENSDARG00000063037 157 1.507 - - - - - 0.784 0.723 - - lipase, hormone-sensitive a [Source:ZFIN;Acc:ZDB-GENE-060503-734]
28. USP2 USP2 157 1.485 - - - - - 0.726 0.759 - -
29. cxxc1l cxxc1l 1035 1.478 - 0.772 - - - - 0.706 - -
30. tbl3 ENSDARG00000052344 1530 1.469 - - - 0.747 - - 0.722 - - transducin (beta)-like 3 [Source:ZFIN;Acc:ZDB-GENE-041114-104]
31. tekt2 ENSDARG00000028973 160 1.467 - 0.719 - - - - 0.748 - - tektin 2 (testicular) [Source:ZFIN;Acc:ZDB-GENE-040113-1]
32. edc3 ENSDARG00000051931 780 1.467 - - - - - 0.712 - 0.755 - enhancer of mRNA decapping 3 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-287]
33. PKN2 ENSDARG00000101293 358 1.45 - - - - - 0.703 - 0.747 - protein kinase N2 [Source:HGNC Symbol;Acc:HGNC:9406]
34. PPFIBP1_1 PPFIBP1_1 2256 1.444 - - - - - 0.703 0.741 - -
35. cldn7a ENSDARG00000036376, ENSDARG00000111721, ENSDARG00000115826 56 1.443 - 0.735 - - - - - 0.708 - claudin 7a [Source:ZFIN;Acc:ZDB-GENE-040718-29]
36. dysf ENSDARG00000007370 125 1.443 - 0.731 - - - 0.712 - - - dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive) [Source:ZFIN;Acc:ZDB-GENE-070501-1]
37. mab21l1 ENSDARG00000102047 4665 1.44 - - 0.718 0.722 - - - - - mab-21-like 1 [Source:ZFIN;Acc:ZDB-GENE-020516-1]
38. rnf44 ENSDARG00000068582 1612 1.435 - - 0.715 - - 0.720 - - - ring finger protein 44 [Source:ZFIN;Acc:ZDB-GENE-060929-604]
39. fam167ab ENSDARG00000023952 354 1.428 - - - 0.717 - 0.711 - - - family with sequence similarity 167, member Ab [Source:ZFIN;Acc:ZDB-GENE-041014-11]
40. cramp1l cramp1l 700 1.416 - 0.707 - - - - - 0.709 -
41. FAM120A ENSDARG00000075021 73 0.968 - - - - - 0.968 - - - family with sequence similarity 120A [Source:ZFIN;Acc:ZDB-GENE-110131-10]
42. nos1 ENSDARG00000068910 399 0.955 - - - - - 0.955 - - - nitric oxide synthase 1 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-001101-1]
43. SNORD30 SNORD30 34 0.955 - - - - - 0.955 - - -
44. SLC7A8 SLC7A8 25 0.955 - - - - - 0.955 - - -
45. zgc:173994 zgc:173994 204 0.951 - - - - - 0.951 - - -
46. pgap1 ENSDARG00000062465 30 0.95 - - - - - 0.950 - - - post-GPI attachment to proteins 1 [Source:ZFIN;Acc:ZDB-GENE-090313-216]
47. SLC44A1 SLC44A1 43 0.95 - - - - - 0.950 - - -
48. dckl1b dckl1b 115 0.948 - - - - - 0.948 - - -
49. HEXDC ENSDARG00000061216, ENSDARG00000116903 83 0.938 - - - - - 0.938 - - - hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing [Source:ZFIN;Acc:ZDB-GENE-060929-448]
50. fosl1a ENSDARG00000015355 139 0.938 - - - - - 0.938 - - - FOS-like antigen 1a [Source:ZFIN;Acc:ZDB-GENE-061207-7]
51. si:dkey-220o10.1 si:dkey-220o10.1 63 0.938 - - - - - 0.938 - - -
52. NSUN6 ENSDARG00000103478 29 0.938 - - - - - 0.938 - - - NOL1/NOP2/Sun domain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-080808-8]
53. si:dkey-11f4.14 ENSDARG00000098461 35 0.938 - - - - - 0.938 - - - si:dkey-11f4.14 [Source:ZFIN;Acc:ZDB-GENE-070912-355]
54. PTPDC1_1 PTPDC1_1 12 0.938 - - - - - 0.938 - - -
55. adcyap1a ENSDARG00000004015 67 0.938 - - - - - 0.938 - - - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
56. otx2 766 0.938 - - - - - 0.938 - - - orthodenticle homeobox 2, transcript variant X2
57. adar ENSDARG00000012389 520 0.935 - - - - - 0.935 - - - adenosine deaminase, RNA-specific [Source:ZFIN;Acc:ZDB-GENE-000616-5]
58. myo10l1 ENSDARG00000074723 21 0.931 - - - - - 0.931 - - - myosin X-like 1 [Source:ZFIN;Acc:ZDB-GENE-080425-1]
59. si:dkey-14k9.3 ENSDARG00000045595 256 0.93 - - - - - 0.930 - - - si:dkey-14k9.3 [Source:ZFIN;Acc:ZDB-GENE-030131-2893]
60. etaa1 ENSDARG00000074915 123 0.93 - - - - - 0.930 - - - ETAA1, ATR kinase activator [Source:ZFIN;Acc:ZDB-GENE-080204-12]
61. CU104700.1 CU104700.1 114 0.928 - - - - - 0.928 - - -
62. eral1 ENSDARG00000059887 149 0.928 - - - - - 0.928 - - - Era-like 12S mitochondrial rRNA chaperone 1 [Source:ZFIN;Acc:ZDB-GENE-060526-84]
63. pet112 pet112 223 0.927 - - - - - 0.927 - - -
64. si:ch211-138a11.5 si:ch211-138a11.5 27 0.927 - - - - - 0.927 - - -
65. oprk1 ENSDARG00000006894 43 0.927 - - - - - 0.927 - - - opioid receptor, kappa 1 [Source:ZFIN;Acc:ZDB-GENE-030729-1]
66. si:ch73-27e22.6 ENSDARG00000031731 12 0.927 - - - - - 0.927 - - - si:ch73-27e22.6 [Source:ZFIN;Acc:ZDB-GENE-070705-234]
67. AMDHD1 ENSDARG00000007366 89 0.926 - - - - - 0.926 - - - amidohydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28577]
68. NMUR1 NMUR1 30 0.926 - - - - - 0.926 - - -
69. vax2 ENSDARG00000058702 175 0.926 - - - - - 0.926 - - - ventral anterior homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030904-8]
70. si:ch211-119c24.1 si:ch211-119c24.1 17 0.926 - - - - - 0.926 - - -
71. CABZ01084613.1 CABZ01084613.1 22 0.923 - - - - - 0.923 - - -
72. PAMR1 ENSDARG00000093480 40 0.922 - - - - - 0.922 - - - peptidase domain containing associated with muscle regeneration 1 [Source:ZFIN;Acc:ZDB-GENE-100422-12]
73. lrrc4ba ENSDARG00000004597, ENSDARG00000112893 72 0.922 - - - - - 0.922 - - - leucine rich repeat containing 4Ba [Source:ZFIN;Acc:ZDB-GENE-080327-25]
74. syt16 ENSDARG00000030761 322 0.922 - - - - - 0.922 - - - synaptotagmin XVI [Source:ZFIN;Acc:ZDB-GENE-090313-210]
75. si:dkey-10g2.5 si:dkey-10g2.5 72 0.921 - - - - - 0.921 - - -
76. si:ch211-93g21.2 ENSDARG00000092842 56 0.921 - - - - - 0.921 - - - si:ch211-93g21.2 [Source:ZFIN;Acc:ZDB-GENE-060503-799]
77. pde12 ENSDARG00000030964 615 0.921 - - - - - 0.921 - - - phosphodiesterase 12 [Source:ZFIN;Acc:ZDB-GENE-060519-25]
78. si:ch211-161h7.8 ENSDARG00000089919 60 0.919 - - - - - 0.919 - - - si:ch211-161h7.8 [Source:ZFIN;Acc:ZDB-GENE-091204-302]
79. tbc1d2b ENSDARG00000061986 247 0.918 - - - - - 0.918 - - - TBC1 domain family, member 2B [Source:ZFIN;Acc:ZDB-GENE-100922-148]
80. kat6a ENSDARG00000018907 250 0.918 - - - - - 0.918 - - - K(lysine) acetyltransferase 6A [Source:ZFIN;Acc:ZDB-GENE-021022-3]
81. otomp ENSDARG00000040306 682 0.918 - - - - - 0.918 - - - otolith matrix protein [Source:ZFIN;Acc:ZDB-GENE-040709-1]
82. nr0b1 ENSDARG00000056541 35 0.917 - - - - - 0.917 - - - nuclear receptor subfamily 0, group B, member 1 [Source:ZFIN;Acc:ZDB-GENE-070130-1]
83. camk2b1 ENSDARG00000011065 79 0.916 - - - - - 0.916 - - - calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9588]
84. trpm4 trpm4 501 0.915 - - - - - 0.915 - - -
85. C5H2orf68 C5H2orf68 849 0.915 - - - - - 0.915 - - -
86. atrnl1a ENSDARG00000077188 66 0.914 - - - - - 0.914 - - - attractin-like 1a [Source:ZFIN;Acc:ZDB-GENE-081028-60]
87. ptgis ENSDARG00000060094, ENSDARG00000113227 82 0.912 - - - - - 0.912 - - - prostaglandin I2 (prostacyclin) synthase [Source:ZFIN;Acc:ZDB-GENE-070116-1]
88. adcy8 ENSDARG00000031783 29 0.911 - - - - - 0.911 - - - adenylate cyclase 8 (brain) [Source:ZFIN;Acc:ZDB-GENE-070912-197]
89. BX927351.1 ENSDARG00000096844 125 0.911 - - - - - 0.911 - - -
90. UBA6 UBA6 229 0.91 - - - - - 0.910 - - -
91. tspan15 ENSDARG00000039455, ENSDARG00000110074, ENSDARG00000112969 76 0.91 - - - - - 0.910 - - - tetraspanin 15 [Source:ZFIN;Acc:ZDB-GENE-050417-295]
92. si:dkey-229d11.3 ENSDARG00000093255 41 0.909 - - - - - 0.909 - - - si:dkey-229d11.3 [Source:ZFIN;Acc:ZDB-GENE-091117-40]
93. gabrr2b ENSDARG00000014057 9 0.909 - - - - - 0.909 - - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
94. ptprua ENSDARG00000092638 479 0.909 - - - - - 0.909 - - - protein tyrosine phosphatase, receptor type, U, a [Source:ZFIN;Acc:ZDB-GENE-060503-232]
95. PLEKHS1_2 PLEKHS1_2 21 0.909 - - - - - 0.909 - - -
96. bend5 ENSDARG00000075624 10 0.909 - - - - - 0.909 - - - BEN domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-081104-460]
97. si:ch211-212k5.2 si:ch211-212k5.2 152 0.909 - - - - - 0.909 - - -
98. 5_8S_rRNA 5_8S_rRNA 24 0.909 - - - - - 0.909 - - -
99. CABZ01118004.1 ENSDARG00000117218 2 0.909 - - - - - 0.909 - - -
100. BX004785.2 ENSDARG00000093487 10 0.909 - - - - - 0.909 - - -

There are 1078 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA