Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for lrp1ba

Gene Name Gene ID Reads Annotation
lrp1ba ENSDARG00000004789, ENSDARG00000094171 3 low density lipoprotein receptor-related protein 1Ba [Source:ZFIN;Acc:ZDB-GENE-050208-608]










Genes with expression patterns similar to lrp1ba

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrp1ba ENSDARG00000004789, ENSDARG00000094171 3 3 1.000 - - - 1.000 - - - 1.000 low density lipoprotein receptor-related protein 1Ba [Source:ZFIN;Acc:ZDB-GENE-050208-608]
2. BIN1 BIN1 11 2 1.000 - - - 1.000 - - - -
3. popdc2 ENSDARG00000069922, ENSDARG00000109930 5 2 1.000 - - - 1.000 - - - - popeye domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-2]
4. si:dkey-57a22.12 si:dkey-57a22.12 23 2 1.000 - - - 1.000 - - - -
5. CU570981.1 CU570981.1 9 1.977 - - - - 1.000 - - - 0.977
6. mlxip ENSDARG00000059474 12 1.942 - - - - 1.000 - - - 0.942 MLX interacting protein [Source:ZFIN;Acc:ZDB-GENE-060526-8]
7. SCARB2 SCARB2 24 1.932 1.000 - - - - - - - 0.932
8. ATP9A ENSDARG00000115869 9 1.897 - - - - 0.908 - - - 0.989 ATPase phospholipid transporting 9A (putative) [Source:HGNC Symbol;Acc:HGNC:13540]
9. UNC80 ENSDARG00000098290 2 1.881 - - - - 1.000 - - - 0.881 unc-80 homolog (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-140106-167]
10. gnai3 ENSDARG00000030644 29 1.877 1.000 - - - 0.877 - - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070713-6]
11. ddrgk1 ENSDARG00000037172 14 1.876 1.000 - - - - - - - 0.876 DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
12. si:ch211-187f22.2 si:ch211-187f22.2 7 1.876 1.000 - - - - - - - 0.876
13. EVI5L ENSDARG00000052766 8 1.866 1.000 - - - - - - - 0.866 ecotropic viral integration site 5 like [Source:HGNC Symbol;Acc:HGNC:30464]
14. CR936465.1 CR936465.1 7 1.787 1.000 - - - 0.787 - - - -
15. CR942805.3 CR942805.3 7 1.787 1.000 - - - 0.787 - - - -
16. znf652 ENSDARG00000062302 17 1.756 1.000 - - - - - - - 0.756 zinc finger protein 652 [Source:ZFIN;Acc:ZDB-GENE-030131-5857]
17. kcnk10b ENSDARG00000045956 43 1.748 1.000 - - - - - - - 0.748 potassium channel, subfamily K, member 10b [Source:ZFIN;Acc:ZDB-GENE-050420-31]
18. BEND2_1 BEND2_1 45 1.741 1.000 - - - 0.741 - - - -
19. si:rp71-1k13.5 si:rp71-1k13.5 2 1.714 - - - - 0.755 - - - 0.959
20. si:dkey-70p6.1 ENSDARG00000092039, ENSDARG00000114631 19 1 - - - - 1.000 - - - - si:dkey-70p6.1 [Source:ZFIN;Acc:ZDB-GENE-040724-140]
21. si:dkey-96n2.2 si:dkey-96n2.2 0 1 - - - - 1.000 - - - -
22. cldnd ENSDARG00000006580 17 1 1.000 - - - - - - - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
23. si:ch211-190k17.19 ENSDARG00000095756 19 1 1.000 - - - - - - - - si:ch211-190k17.19 [Source:ZFIN;Acc:ZDB-GENE-070912-167]
24. Metazoa_SRP_27 Metazoa_SRP_27 2 1 1.000 - - - - - - - -
25. arl16 ENSDARG00000059498, ENSDARG00000110386 229 1 1.000 - - - - - - - - ADP-ribosylation factor-like 16 [Source:ZFIN;Acc:ZDB-GENE-070410-114]
26. grm1a ENSDARG00000026796 9 1 1.000 - - - - - - - - glutamate receptor, metabotropic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7893]
27. CU984580.1 CU984580.1 141 1 1.000 - - - - - - - -
28. rag2 ENSDARG00000052121 15 1 1.000 - - - - - - - - recombination activating gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-235]
29. U3_10 U3_10 1 1 1.000 - - - - - - - -
30. zgc:110434 21 1 1.000 - - - - - - - - zgc:110434
31. si:ch211-202m22.1 ENSDARG00000094491 24 1 1.000 - - - - - - - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
32. lenep ENSDARG00000095553 11 1 1.000 - - - - - - - - lens epithelial protein [Source:ZFIN;Acc:ZDB-GENE-060130-3]
33. TDRD15 TDRD15 46 1 1.000 - - - - - - - -
34. si:dkey-57c22.1 ENSDARG00000093846 12 1 - - - - 1.000 - - - - si:dkey-57c22.1 [Source:ZFIN;Acc:ZDB-GENE-110914-164]
35. nr5a1a ENSDARG00000103176 12 1 1.000 - - - - - - - - nuclear receptor subfamily 5, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-010504-1]
36. socs7 ENSDARG00000077018, ENSDARG00000114903, ENSDARG00000115097 7 1 - - - - 1.000 - - - - suppressor of cytokine signaling 7 [Source:ZFIN;Acc:ZDB-GENE-080204-125]
37. nsmfb ENSDARG00000101234 4 1 - - - - 1.000 - - - - NMDA receptor synaptonuclear signaling and neuronal migration factor b [Source:ZFIN;Acc:ZDB-GENE-080603-4]
38. si:ch211-245j22.3 ENSDARG00000041379, ENSDARG00000110219, ENSDARG00000110924 3 1 1.000 - - - - - - - - si:ch211-245j22.3 [Source:ZFIN;Acc:ZDB-GENE-050419-38]
39. SMCHD1 ENSDARG00000104374 2 1 - - - - 1.000 - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
40. elovl4b ENSDARG00000027495 107 1 1.000 - - - - - - - - ELOVL fatty acid elongase 4b [Source:ZFIN;Acc:ZDB-GENE-030131-7672]
41. U8 U8 11 1 - - - - 1.000 - - - -
42. pdia2 ENSDARG00000018263 74 1 1.000 - - - - - - - - protein disulfide isomerase family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-705]
43. zgc:113209 ENSDARG00000100294 176 1 1.000 - - - - - - - - zgc:113209 [Source:ZFIN;Acc:ZDB-GENE-050410-8]
44. zgc:172053 ENSDARG00000038321 9 1 1.000 - - - - - - - - zgc:172053 [Source:ZFIN;Acc:ZDB-GENE-080219-25]
45. BRPF1 ENSDARG00000103665 10 1 - - - - 1.000 - - - - bromodomain and PHD finger containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-731]
46. BX663613.3 ENSDARG00000117521 1 1 - - - - 1.000 - - - -
47. DUSP23 DUSP23 121 1 1.000 - - - - - - - -
48. SNORA63_2 SNORA63_2 6 1 1.000 - - - - - - - -
49. sftpbb ENSDARG00000067566 13 1 - - - - 1.000 - - - - surfactant protein Bb [Source:ZFIN;Acc:ZDB-GENE-060526-155]
50. zgc:103559 ENSDARG00000038293 1 1 - - - - 1.000 - - - - zgc:103559 [Source:ZFIN;Acc:ZDB-GENE-041212-22]
51. CT583625.1 ENSDARG00000093788 10 1 - - - - 1.000 - - - -
52. si:dkey-89j23.3 si:dkey-89j23.3 9 1 1.000 - - - - - - - -
53. trim35-38 trim35-38 3 1 - - - - 1.000 - - - -
54. CST7 CST7 22 1 - - - - 1.000 - - - -
55. gcshb ENSDARG00000105187 182 1 1.000 - - - - - - - - glycine cleavage system protein H (aminomethyl carrier), b [Source:ZFIN;Acc:ZDB-GENE-040718-319]
56. si:ch211-208f21.2 ENSDARG00000094177 61 1 1.000 - - - - - - - - si:ch211-208f21.2 [Source:ZFIN;Acc:ZDB-GENE-110914-134]
57. stpg1 ENSDARG00000103765 19 1 1.000 - - - - - - - - sperm-tail PG-rich repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-070705-373]
58. htr1b ENSDARG00000053987 11 1 1.000 - - - - - - - - 5-hydroxytryptamine (serotonin) receptor 1B [Source:ZFIN;Acc:ZDB-GENE-081022-141]
59. zgc:158846 ENSDARG00000058462, ENSDARG00000113282 161 1 1.000 - - - - - - - - zgc:158846 [Source:ZFIN;Acc:ZDB-GENE-070209-50]
60. ddr2b ENSDARG00000058695 7 1 1.000 - - - - - - - - discoidin domain receptor tyrosine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060503-361]
61. si:ch211-219a15.3 ENSDARG00000087659 12 1 1.000 - - - - - - - - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
62. fam160b1 ENSDARG00000060168 22 1 1.000 - - - - - - - - family with sequence similarity 160, member B1 [Source:ZFIN;Acc:ZDB-GENE-070424-63]
63. CDH19 2 1 - - - - 1.000 - - - - cadherin 19, type 2, transcript variant X3
64. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1 1.000 - - - - - - - -
65. si:dkey-220a11.6 si:dkey-220a11.6 0 1 1.000 - - - - - - - -
66. U5_4 U5_4 1 1 1.000 - - - - - - - -
67. CU469509.2 CU469509.2 4 1 - - - - 1.000 - - - -
68. MIER3 MIER3 114 1 1.000 - - - - - - - -
69. CABZ01030262.1 CABZ01030262.1 11 1 - - - - 1.000 - - - -
70. cadpsa ENSDARG00000043661 160 1 1.000 - - - - - - - - Ca2+-dependent activator protein for secretion a [Source:ZFIN;Acc:ZDB-GENE-030616-525]
71. si:ch1073-39g8.1 si:ch1073-39g8.1 7 1 1.000 - - - - - - - -
72. CR388013.3 CR388013.3 45 1 1.000 - - - - - - - -
73. gas5 279 1 1.000 - - - - - - - - growth arrest-specific 5, transcript variant X4
74. SNORA42 SNORA42 24 1 - - - - 1.000 - - - -
75. lingo3a ENSDARG00000061970 234 1 1.000 - - - - - - - - leucine rich repeat and Ig domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-060503-54]
76. TRPC7 TRPC7 1 1 - - - - 1.000 - - - -
77. si:dkey-7l6.3 ENSDARG00000094514 146 1 1.000 - - - - - - - - si:dkey-7l6.3 [Source:ZFIN;Acc:ZDB-GENE-070912-586]
78. U1_29 U1_29 0 1 1.000 - - - - - - - -
79. sat2a ENSDARG00000036430, ENSDARG00000115169 0 1 - - - - 1.000 - - - - spermidine/spermine N1-acetyltransferase family member 2a [Source:ZFIN;Acc:ZDB-GENE-041212-21]
80. slc8a2a ENSDARG00000008912, ENSDARG00000116797 12 1 - - - - 1.000 - - - - solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155]
81. cmpk2 ENSDARG00000031359 1 1 - - - - 1.000 - - - - cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040724-24]
82. RIMBP2_1 RIMBP2_1 57 1 1.000 - - - - - - - -
83. DRAXIN ENSDARG00000058256, ENSDARG00000111676 152 1 1.000 - - - - - - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
84. shisa9 shisa9 35 1 1.000 - - - - - - - -
85. slc18b1 ENSDARG00000044047 7 1 - - - - 1.000 - - - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
86. si:dkey-233e3.5 si:dkey-233e3.5 7 1 1.000 - - - - - - - -
87. VDAC3 ENSDARG00000003695 34 1 1.000 - - - - - - - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
88. wdr27 ENSDARG00000053386 2 1 - - - - 1.000 - - - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
89. ascc2 ENSDARG00000013058 228 1 1.000 - - - - - - - - activating signal cointegrator 1 complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1223]
90. gfra2b ENSDARG00000044015 5 1 1.000 - - - - - - - - GDNF family receptor alpha 2b [Source:ZFIN;Acc:ZDB-GENE-091204-26]
91. si:ch73-289h5.3 si:ch73-289h5.3 9 1 - - - - 1.000 - - - -
92. nots ENSDARG00000099824 9 1 1.000 - - - - - - - - nothepsin [Source:ZFIN;Acc:ZDB-GENE-010620-1]
93. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1 - - - - 1.000 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
94. U1_15 U1_15 1 1 - - - - 1.000 - - - -
95. OVGP1 ENSDARG00000075745 6 1 - - - - 1.000 - - - - oviductal glycoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-118]
96. cnn1a ENSDARG00000017193 6 1 1.000 - - - - - - - - calponin 1, basic, smooth muscle, a [Source:ZFIN;Acc:ZDB-GENE-090312-141]
97. dnali1 ENSDARG00000069815 10 1 1.000 - - - - - - - - dynein, axonemal, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-080204-7]
98. aldoca ENSDARG00000057661, ENSDARG00000111344 1 1 - - - - 1.000 - - - - aldolase C, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-050706-128]
99. NFATC4 ENSDARG00000054162 44 1 1.000 - - - - - - - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
100. SLITRK4 ENSDARG00000079781 54 1 1.000 - - - - - - - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]

There are 460 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA