Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lrit1a

Gene Name Gene ID Reads Annotation
lrit1a ENSDARG00000019179 9 leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a [Source:ZFIN;Acc:ZDB-GENE-040924-5]










Genes with expression patterns similar to lrit1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrit1a ENSDARG00000019179 9 6 - 1.000 - 1.000 1.000 - 1.000 1.000 1.000 leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a [Source:ZFIN;Acc:ZDB-GENE-040924-5]
2. ttll2 ENSDARG00000077853 9 2.858 - 0.858 - - - - 1.000 - 1.000 tubulin tyrosine ligase-like family, member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-297]
3. CABZ01085626.1 ENSDARG00000117294 8 2 - - - - - - 1.000 - 1.000
4. mgat3 mgat3 195 1.961 - 0.961 - - - - 1.000 - -
5. si:dkey-211g8.6 ENSDARG00000063088 19 1.939 - 0.939 - - - - 1.000 - - si:dkey-211g8.6 [Source:ZFIN;Acc:ZDB-GENE-060503-813]
6. NUGGC NUGGC 9 1.939 - 0.939 - - - - 1.000 - -
7. GRM5 GRM5 4 1.939 - 0.939 - - - - - - 1.000
8. SNORA62_2 SNORA62_2 4 1.926 - - - - 0.926 - - - 1.000
9. zgc:66024 ENSDARG00000068840, ENSDARG00000068846 37 1.89 - 0.939 - - - - 0.951 - - zgc:66024 [Source:ZFIN;Acc:ZDB-GENE-040426-1511]
10. F2RL3 ENSDARG00000079399 29 1.787 - 0.787 - - - - 1.000 - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
11. foxg1c ENSDARG00000068380, ENSDARG00000114414 25 1.773 - 0.939 - - - - 0.834 - - forkhead box G1c [Source:ZFIN;Acc:ZDB-GENE-050419-26]
12. FAM183B FAM183B 25 1.772 - - - - - - 0.772 - 1.000
13. CR762483.1 ENSDARG00000114454 44 1.761 - 0.896 - - - - 0.865 - - growth-regulated alpha protein-like [Source:NCBI gene;Acc:101883994]
14. zgc:173593 ENSDARG00000077360 10 1.76 - - - - - - 1.000 - 0.760 zgc:173593 [Source:ZFIN;Acc:ZDB-GENE-071004-57]
15. si:ch211-202m22.1 ENSDARG00000094491 24 1.753 - - - 0.753 - - 1.000 - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
16. clrn1 ENSDARG00000102890 5 1.73 - - - 0.730 - - 1.000 - - clarin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-420]
17. si:ch73-269m14.3 ENSDARG00000096305 28 1.719 - - - - 0.796 - 0.923 - - si:ch73-269m14.3 [Source:ZFIN;Acc:ZDB-GENE-120215-13]
18. CU655961.3 ENSDARG00000106724 14 1.719 - - - - 0.885 - 0.834 - -
19. pou6f2 ENSDARG00000086362 135 1.703 - 0.939 - - - - 0.764 - - POU class 6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-091118-71]
20. zgc:173770 ENSDARG00000076476 34 1.701 - 0.900 - - - - 0.801 - - zgc:173770 [Source:ZFIN;Acc:ZDB-GENE-070822-29]
21. fam184a ENSDARG00000014081 93 1.695 - 0.877 - - 0.818 - - - - family with sequence similarity 184, member A [Source:ZFIN;Acc:ZDB-GENE-041014-214]
22. zgc:152891 ENSDARG00000016789 11 1.67 - 0.939 - - 0.731 - - - - zgc:152891 [Source:ZFIN;Acc:ZDB-GENE-061013-229]
23. C5H11orf88 C5H11orf88 280 1.649 - 0.792 - - - - 0.857 - -
24. slc24a1 ENSDARG00000041431 33 1.642 - - - - 0.859 - 0.783 - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 [Source:ZFIN;Acc:ZDB-GENE-060503-191]
25. zgc:103438 ENSDARG00000035663 46 1.621 - 0.900 - - 0.721 - - - - zgc:103438 [Source:ZFIN;Acc:ZDB-GENE-041010-131]
26. si:dkey-103d23.5 26 1.574 - 0.856 - - - - 0.718 - - si:dkey-103d23.5
27. plekhh2 ENSDARG00000040851, ENSDARG00000114477 14 1.539 - - - - 0.799 - 0.740 - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-081028-42]
28. ZDHHC12 ZDHHC12 29 1.491 - - - - 0.763 - 0.728 - -
29. DNM2 DNM2 2 1 - - - - - - 1.000 - -
30. si:dkey-216e24.5 si:dkey-216e24.5 1 1 - - - - - - 1.000 - -
31. or115-11 ENSDARG00000053813 0 1 - - - - - - - - 1.000 odorant receptor, family F, subfamily 115, member 11 [Source:ZFIN;Acc:ZDB-GENE-070806-12]
32. si:ch211-131e11.14 si:ch211-131e11.14 7 1 - - - - - - 1.000 - -
33. gpr158 gpr158 52 1 - - - - - - 1.000 - -
34. FP245465.3 FP245465.3 5 1 - - - - - - - - 1.000
35. gucy2f ENSDARG00000025504 6 1 - - - - - - 1.000 - - guanylate cyclase 2F, retinal [Source:ZFIN;Acc:ZDB-GENE-011128-7]
36. BX321875.3 ENSDARG00000112569 24 1 - - - - - - 1.000 - -
37. si:ch211-11i5.3 si:ch211-11i5.3 7 1 - - - - - - 1.000 - -
38. kcnq3 ENSDARG00000060085 0 1 - - - - - - - - 1.000 potassium voltage-gated channel, KQT-like subfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-301]
39. CLCN2 CLCN2 8 1 - - - - - - 1.000 - -
40. U3_6 U3_6 0 1 - - - - - - - - 1.000
41. cabp1b ENSDARG00000033411 2 1 - - - - - - - - 1.000 calcium binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040718-111]
42. BX324198.1 BX324198.1 12 1 - - - - - - 1.000 - -
43. cd74a ENSDARG00000009087 20 1 - - - - - - 1.000 - - CD74 molecule, major histocompatibility complex, class II invariant chain a [Source:ZFIN;Acc:ZDB-GENE-000901-1]
44. si:dkey-242h9.4 4 1 - - - - - - 1.000 - - si:dkey-242h9.4
45. si:ch73-138e16.7 si:ch73-138e16.7 0 1 - - - - - - - - 1.000
46. oxtrl ENSDARG00000044175 10 1 - - - - - - 1.000 - - oxytocin receptor like [Source:ZFIN;Acc:ZDB-GENE-110805-1]
47. rx3 ENSDARG00000052893 43 1 - - - - - - 1.000 - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
48. si:ch211-161m3.4 ENSDARG00000103375 10 1 - - - - - - 1.000 - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
49. wu:fe11b02_1 wu:fe11b02_1 7 1 - - - - - - 1.000 - -
50. zgc:165423 ENSDARG00000052905 1 1 - - - - - - - - 1.000 zgc:165423 [Source:ZFIN;Acc:ZDB-GENE-070720-11]
51. zgc:173708 zgc:173708 2 1 - - - - - - - - 1.000
52. im:7138239 ENSDARG00000039070 3 1 - - - - - - 1.000 - - im:7138239 [Source:ZFIN;Acc:ZDB-GENE-081007-2]
53. slc2a9l1 ENSDARG00000070672 1 1 - - - - - - 1.000 - - solute carrier family 2 (facilitated glucose transporter), member 9-like 1 [Source:ZFIN;Acc:ZDB-GENE-090915-3]
54. SNORD52 SNORD52 23 1 - - - - - - 1.000 - -
55. CU075911.1 CU075911.1 2 1 - - - - - - - - 1.000
56. BX649490.1 ENSDARG00000091718 7 1 - - - - - - 1.000 - - titin-like [Source:NCBI gene;Acc:101883412]
57. CT025934.2 CT025934.2 22 1 - - - - - - 1.000 - -
58. SNORD10 SNORD10 71 1 - - - - - - 1.000 - -
59. CABZ01028403.1 CABZ01028403.1 48 1 - - - - - - 1.000 - -
60. si:ch211-244b2.3 ENSDARG00000069244 19 1 - - - - - - 1.000 - - si:ch211-244b2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4737]
61. ppm1na ENSDARG00000010231 3 1 - - - - - - 1.000 - - protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2731]
62. Metazoa_SRP_21 Metazoa_SRP_21 1 1 - - - - - - 1.000 - -
63. si:dkey-189d19.1 si:dkey-189d19.1 2 1 - - - - - - - - 1.000
64. VSIG10L ENSDARG00000089237 12 1 - - - - - - 1.000 - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
65. ZNF648 ENSDARG00000104823 194 1 - - - - - - 1.000 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
66. or128-8 ENSDARG00000094462 0 1 - - - - - - - - 1.000 odorant receptor, family E, subfamily 128, member 8 [Source:ZFIN;Acc:ZDB-GENE-070806-112]
67. si:dkey-23o4.6 ENSDARG00000034577, ENSDARG00000113997 1 1 - - - - - - 1.000 - - si:dkey-23o4.6 [Source:ZFIN;Acc:ZDB-GENE-100922-3]
68. fam213ab 1 1 - - - - - - 1.000 - - family with sequence similarity 213, member Ab
69. si:dkeyp-75b4.10 ENSDARG00000079043 7 1 - - - - - - 1.000 - - si:dkeyp-75b4.10 [Source:ZFIN;Acc:ZDB-GENE-090313-394]
70. HELZ2 ENSDARG00000012600 2 1 - - - - - - - - 1.000 helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
71. si:ch73-95a24.1 si:ch73-95a24.1 11 1 - - - - - - 1.000 - -
72. zgc:136639os zgc:136639os 2 1 - - - - - - - - 1.000
73. CT573322.1 CT573322.1 38 1 - - - - - - 1.000 - -
74. irbp 2 1 - - - - - - - - 1.000 interphotoreceptor retinoid-binding protein, transcript variant X2
75. CU570791.1 ENSDARG00000098597 4 1 - - - - - - 1.000 - - NACHT and WD repeat domain-containing protein 2-like [Source:NCBI gene;Acc:108179119]
76. pcolce2b ENSDARG00000055575 2 1 - - - - - - - - 1.000 procollagen C-endopeptidase enhancer 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1177]
77. mir30b 4 1 - - - - - - 1.000 - - microRNA 30b
78. epha6 ENSDARG00000022971 52 1 - - - - - - 1.000 - - eph receptor A6 [Source:ZFIN;Acc:ZDB-GENE-090311-43]
79. GBE1_1 GBE1_1 1 1 - - - - - - 1.000 - -
80. nfixb ENSDARG00000061836 7 1 - - - - - - 1.000 - - nuclear factor I/Xb [Source:ZFIN;Acc:ZDB-GENE-060421-5000]
81. CR626874.1 ENSDARG00000100141 55 1 - - - - - - 1.000 - -
82. si:ch211-217k17.3 si:ch211-217k17.3 2 1 - - - - - - - - 1.000
83. cpn1_1 ENSDARG00000005185, ENSDARG00000096728 2 1 - - - - - - 1.000 - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
84. Metazoa_SRP_5 Metazoa_SRP_5 2 1 - - - - - - - - 1.000
85. cx28.9 ENSDARG00000041797 12 1 - - - - - - 1.000 - - connexin 28.9 [Source:ZFIN;Acc:ZDB-GENE-041114-200]
86. TRIM35_6 TRIM35_6 1 1 - - - - - - 1.000 - -
87. nkd3_1 ENSDARG00000013174, ENSDARG00000069984, ENSDARG00000086218, ENSDARG00000096278 1 1 - - - - - - 1.000 - - naked cuticle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-060503-63]
88. si:ch211-67e16.10 si:ch211-67e16.10 2 1 - - - - - - 1.000 - -
89. hbaa1 ENSDARG00000097011 58 1 - - - - - - - - 1.000 hemoglobin, alpha adult 1 [Source:ZFIN;Acc:ZDB-GENE-980526-79]
90. BX119910.11 BX119910.11 3 1 - - - - - - - - 1.000
91. CT033818.1 CT033818.1 0 1 - - - - - - - - 1.000
92. dcst2 ENSDARG00000088693 1 1 - - - - - - - - 1.000 DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
93. BX530067.1 BX530067.1 20 1 - - - - - - 1.000 - -
94. si:ch211-160d14.9 8 1 - - - - - - 1.000 - - si:ch211-160d14.9, transcript variant X1
95. zgc:113307 ENSDARG00000044894 17 1 - - - - - - - - 1.000 zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
96. phc3 ENSDARG00000074604 2 1 - - - - - - - - 1.000 polyhomeotic homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-369]
97. zgc:174311 zgc:174311 3 1 - - - - - - - - 1.000
98. si:ch211-231i17.4 ENSDARG00000094903 2 1 - - - - - - - - 1.000 si:ch211-231i17.4 [Source:ZFIN;Acc:ZDB-GENE-110914-104]
99. CABZ01034089.2 CABZ01034089.2 0 1 - - - - - - - - 1.000
100. il10 ENSDARG00000078147 3 1 - - - - - - 1.000 - - interleukin 10 [Source:ZFIN;Acc:ZDB-GENE-051111-1]

There are 1073 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA