Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lrch4

Gene Name Gene ID Reads Annotation
lrch4 ENSDARG00000068258 24 leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]










Genes with expression patterns similar to lrch4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lrch4 ENSDARG00000068258 24 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
2. fam178a fam178a 29 2.567 - - 0.818 - - 0.749 1.000 - -
3. IQCG ENSDARG00000068678 77 2.539 - 0.848 0.857 - 0.834 - - - - IQ motif containing G [Source:ZFIN;Acc:ZDB-GENE-050419-109]
4. si:dkeyp-53d3.3 ENSDARG00000098664 65 2 1.000 1.000 - - - - - - - si:dkeyp-53d3.3 [Source:ZFIN;Acc:ZDB-GENE-050208-644]
5. CR936967.1 CR936967.1 2 2 1.000 - - - - - - 1.000 -
6. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 2 1.000 - - - - - - 1.000 - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
7. BX572619.4 BX572619.4 10 1.999 - - - - 0.999 - - 1.000 -
8. si:dkey-51d8.6 ENSDARG00000090769 17 1.997 - - - 1.000 0.997 - - - - si:dkey-51d8.6 [Source:ZFIN;Acc:ZDB-GENE-110914-115]
9. CABZ01041804.1 CABZ01041804.1 312 1.967 1.000 - 0.967 - - - - - -
10. si:dkey-150k17.3 33 1.962 1.000 0.962 - - - - - - - si:dkey-150k17.3
11. cadm1b ENSDARG00000042677 277 1.937 - 1.000 - - 0.937 - - - - cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-080327-34]
12. cyp2ae1 ENSDARG00000013524 14 1.896 - - 0.961 - 0.935 - - - - cytochrome P450, family 2, subfamily AE, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-090312-107]
13. CR848664.1 CR848664.1 12 1.889 - - - 0.889 - - - 1.000 -
14. dync1i2b ENSDARG00000103195 46 1.888 1.000 0.888 - - - - - - - dynein, cytoplasmic 1, intermediate chain 2b [Source:ZFIN;Acc:ZDB-GENE-090121-1]
15. serpinb1l2 ENSDARG00000070396 37 1.881 - - 0.961 - 0.920 - - - - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041001-117]
16. CMA1_8 CMA1_8 10 1.852 - 1.000 - - - - 0.852 - -
17. THBS1 THBS1 6 1.851 - - - - 0.999 - 0.852 - -
18. si:dkey-88j15.5 si:dkey-88j15.5 48 1.84 - - - 1.000 - 0.840 - - -
19. CR352265.1 ENSDARG00000062758 39 1.81 0.927 - - - - - - 0.883 -
20. stx11a ENSDARG00000044039 39 1.807 - 1.000 - - - 0.807 - - - syntaxin 11a [Source:ZFIN;Acc:ZDB-GENE-040426-2564]
21. morn2 ENSDARG00000071360 44 1.784 - - - - 0.959 0.825 - - - MORN repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-230]
22. zgc:92218 zgc:92218 64 1.783 - 0.963 0.820 - - - - - -
23. ndufaf1 ENSDARG00000025549 42 1.778 - - 0.874 - - - 0.904 - - NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050306-9]
24. WDSUB1 ENSDARG00000090418 357 1.775 0.801 - - - 0.974 - - - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061110-97]
25. tph1b ENSDARG00000036082, ENSDARG00000112888 79 1.772 - 0.986 - - - - 0.786 - - tryptophan hydroxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030805-6]
26. csdc2b 82 1.769 0.795 0.974 - - - - - - - cold shock domain containing C2, RNA binding b
27. vegfab ENSDARG00000034700 366 1.767 0.791 0.976 - - - - - - - vascular endothelial growth factor Ab [Source:ZFIN;Acc:ZDB-GENE-030131-4605]
28. si:dkey-163m14.7 65 1.767 0.927 - 0.840 - - - - - - si:dkey-163m14.7
29. ulk4 ENSDARG00000004176 85 1.766 - 0.986 - - 0.780 - - - - unc-51 like kinase 4 [Source:ZFIN;Acc:ZDB-GENE-100922-243]
30. si:dkey-274m14.3 si:dkey-274m14.3 7 1.749 1.000 - - - - 0.749 - - -
31. si:dkey-199m13.8 si:dkey-199m13.8 61 1.745 1.000 - 0.745 - - - - - -
32. si:dkey-103d23.5 26 1.74 0.854 - - - 0.886 - - - - si:dkey-103d23.5
33. C20H8orf82 C20H8orf82 91 1.731 0.854 - - - 0.877 - - - -
34. npffr2.1 npffr2.1 60 1.73 1.000 - - - - - 0.730 - -
35. FUT9 FUT9 91 1.729 1.000 - 0.729 - - - - - -
36. FP325123.1 ENSDARG00000105359 246 1.718 - 0.845 - - - 0.873 - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
37. nhlrc2 ENSDARG00000089581, ENSDARG00000113639 40 1.711 - - 0.925 - - - 0.786 - - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
38. IKZF4 ENSDARG00000037068 36 1.707 - 1.000 - - - - 0.707 - - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
39. gcgb ENSDARG00000040907 182 1.706 0.854 - - - - - 0.852 - - glucagon b [Source:ZFIN;Acc:ZDB-GENE-040712-2]
40. ube2l3b ENSDARG00000027141 26 1.704 - 0.986 - - 0.718 - - - - ubiquitin-conjugating enzyme E2L 3b [Source:ZFIN;Acc:ZDB-GENE-030131-662]
41. klhl26 ENSDARG00000053876 48 1.701 - 1.000 - - - - 0.701 - - kelch-like family member 26 [Source:ZFIN;Acc:ZDB-GENE-030131-5975]
42. si:ch211-155o21.4 ENSDARG00000096567 25 1.686 - - - 0.810 0.876 - - - - si:ch211-155o21.4 [Source:ZFIN;Acc:ZDB-GENE-121214-169]
43. PLEKHA4 PLEKHA4 86 1.68 - 0.927 - - - - 0.753 - -
44. CR478286.1_1 CR478286.1_1 306 1.672 0.765 0.907 - - - - - - -
45. ubxn10 ENSDARG00000052535 24 1.67 - - 0.921 - - 0.749 - - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
46. c6_1 ENSDARG00000057113, ENSDARG00000093052, ENSDARG00000115290 284 1.65 - 0.939 - - - 0.711 - - - complement component 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1358]
47. myo7aa ENSDARG00000099871 23 1.641 0.927 0.714 - - - - - - - myosin VIIAa [Source:ZFIN;Acc:ZDB-GENE-020709-1]
48. PTGER3 ENSDARG00000055781 187 1.624 0.789 0.835 - - - - - - - prostaglandin E receptor 3 (subtype EP3) [Source:ZFIN;Acc:ZDB-GENE-120508-5]
49. zgc:171901 ENSDARG00000074365 129 1.621 - 0.828 0.793 - - - - - - zgc:171901 [Source:ZFIN;Acc:ZDB-GENE-080220-13]
50. chac2 ENSDARG00000055078 86 1.606 - 0.829 0.777 - - - - - - ChaC, cation transport regulator homolog 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-050706-146]
51. ms4a17a.5 ENSDARG00000092204, ENSDARG00000097527 56 1.603 - 0.761 - - - - - 0.842 - membrane-spanning 4-domains, subfamily A, member 17A.5 [Source:ZFIN;Acc:ZDB-GENE-040912-55]
52. tmem244 ENSDARG00000043847 3 1.601 - - - - - 0.749 0.852 - - transmembrane protein 244 [Source:ZFIN;Acc:ZDB-GENE-040724-54]
53. CABZ01045617.2 CABZ01045617.2 13 1.601 - - - - - 0.749 0.852 - -
54. ripply1 ENSDARG00000054103 367 1.592 - 0.798 - - 0.794 - - - - ripply transcriptional repressor 1 [Source:ZFIN;Acc:ZDB-GENE-060113-1]
55. sh2d5 ENSDARG00000014324 228 1.583 - 0.850 0.733 - - - - - - SH2 domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-050327-67]
56. ttc23 ENSDARG00000022160 101 1.578 0.780 - 0.798 - - - - - - tetratricopeptide repeat domain 23 [Source:ZFIN;Acc:ZDB-GENE-050419-126]
57. pfkpb ENSDARG00000012801 223 1.563 0.802 - - - - - 0.761 - - phosphofructokinase, platelet b [Source:ZFIN;Acc:ZDB-GENE-070912-634]
58. xcr1a xcr1a 3 1.563 - - - 0.711 - - 0.852 - -
59. tmem72 ENSDARG00000069332 19 1.557 - 0.808 - - - 0.749 - - - transmembrane protein 72 [Source:ZFIN;Acc:ZDB-GENE-090313-175]
60. si:ch211-218c6.9 si:ch211-218c6.9 40 1.527 - - 0.825 - - - - 0.702 -
61. fam211ba fam211ba 202 1.524 - 0.776 0.748 - - - - - -
62. si:ch211-136m16.8 ENSDARG00000090767 91 1.522 - - 0.821 - - - 0.701 - - si:ch211-136m16.8 [Source:ZFIN;Acc:ZDB-GENE-121214-301]
63. mfsd12a ENSDARG00000061908 68 1.52 - 0.717 0.803 - - - - - - major facilitator superfamily domain containing 12a [Source:ZFIN;Acc:ZDB-GENE-030131-4642]
64. si:ch211-208f21.2 ENSDARG00000094177 61 1.503 - 0.771 0.732 - - - - - - si:ch211-208f21.2 [Source:ZFIN;Acc:ZDB-GENE-110914-134]
65. cldnj ENSDARG00000058880 59 1.497 - - - - 0.777 - - 0.720 - claudin j [Source:ZFIN;Acc:ZDB-GENE-010328-10]
66. lpcat4 ENSDARG00000035028 167 1.481 - 0.724 - - - 0.757 - - - lysophosphatidylcholine acyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5777]
67. penkb ENSDARG00000036045 304 1.475 0.768 - - - - 0.707 - - - proenkephalin b [Source:ZFIN;Acc:ZDB-GENE-030729-3]
68. C13H2orf50 C13H2orf50 87 1.443 - - 0.743 - 0.700 - - - -
69. zgc:174694 zgc:174694 2 1 1.000 - - - - - - - -
70. BX005421.4 BX005421.4 11 1 - 1.000 - - - - - - -
71. SVEP1 ENSDARG00000013526 16 1 - - - - - - - 1.000 - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-110726-1]
72. BX324155.2 BX324155.2 1 1 1.000 - - - - - - - -
73. si:ch73-334d15.4 ENSDARG00000056502 0 1 - - - - - - - 1.000 - si:ch73-334d15.4 [Source:ZFIN;Acc:ZDB-GENE-091204-184]
74. si:ch73-57f22.2 ENSDARG00000087453 28 1 1.000 - - - - - - - - si:ch73-57f22.2 [Source:ZFIN;Acc:ZDB-GENE-110411-58]
75. elovl4a ENSDARG00000006773 412 1 1.000 - - - - - - - - ELOVL fatty acid elongase 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1767]
76. lppr5b lppr5b 23 1 1.000 - - - - - - - -
77. si:dkey-266f7.10 ENSDARG00000086613 7 1 1.000 - - - - - - - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
78. trpm2 ENSDARG00000095696, ENSDARG00000101641 1 1 1.000 - - - - - - - - transient receptor potential cation channel, subfamily M, member 2 [Source:ZFIN;Acc:ZDB-GENE-061214-4]
79. DIP2B DIP2B 18 1 1.000 - - - - - - - -
80. CABZ01059406.1 ENSDARG00000088775 1 1 1.000 - - - - - - - -
81. slc8a1a ENSDARG00000013422 12 1 - 1.000 - - - - - - - solute carrier family 8 (sodium/calcium exchanger), member 1a [Source:ZFIN;Acc:ZDB-GENE-050809-1]
82. CABZ01021433.1 ENSDARG00000105696 74 1 1.000 - - - - - - - - si:cabz01021433.2 [Source:NCBI gene;Acc:100333857]
83. si:ch73-29c22.1 ENSDARG00000090948 5 1 1.000 - - - - - - - - si:ch73-29c22.1 [Source:ZFIN;Acc:ZDB-GENE-091204-309]
84. si:ch211-10j20.7 si:ch211-10j20.7 8 1 1.000 - - - - - - - -
85. sinup ENSDARG00000017163 5 1 - - - - - - - 1.000 - siaz-interacting nuclear protein [Source:ZFIN;Acc:ZDB-GENE-050913-2]
86. prdm11 ENSDARG00000074468 2 1 1.000 - - - - - - - - PR domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-061221-1]
87. si:dkey-49n23.3 ENSDARG00000095325 4 1 1.000 - - - - - - - - si:dkey-49n23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-799]
88. kcnt1 ENSDARG00000079484 45 1 1.000 - - - - - - - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
89. MAST1 MAST1 29 1 1.000 - - - - - - - -
90. si:dkey-185p13.1 ENSDARG00000095837 12 1 - 1.000 - - - - - - - si:dkey-185p13.1 [Source:ZFIN;Acc:ZDB-GENE-110411-125]
91. FAXC FAXC 102 1 1.000 - - - - - - - -
92. BX548021.2 BX548021.2 4 1 1.000 - - - - - - - -
93. LRFN2_1 LRFN2_1 17 1 1.000 - - - - - - - -
94. si:ch211-113a14.26_1 5 1 1.000 - - - - - - - - si:ch211-113a14.26
95. CABZ01081747.1 ENSDARG00000098362 1 1 - - - - - - - 1.000 - gastrula zinc finger protein XlCGF57.1-like [Source:NCBI gene;Acc:100330321]
96. si:ch211-67f13.7 ENSDARG00000077845 8 1 - - - - - - - 1.000 - si:ch211-67f13.7 [Source:ZFIN;Acc:ZDB-GENE-090313-126]
97. zgc:113307 ENSDARG00000044894 17 1 1.000 - - - - - - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
98. si:ch211-188i4.4 5 1 - - - - - - - 1.000 - si:ch211-188i4.4, transcript variant X3
99. sycp3 ENSDARG00000013438 25 1 1.000 - - - - - - - - synaptonemal complex protein 3 [Source:ZFIN;Acc:ZDB-GENE-040910-2]
100. yod1 ENSDARG00000008542 56 1 1.000 - - - - - - - - YOD1 deubiquitinase [Source:ZFIN;Acc:ZDB-GENE-050417-217]

There are 1653 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA