Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lin9

Gene Name Gene ID Reads Annotation
lin9 ENSDARG00000028475 77 lin-9 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-030131-1747]










Genes with expression patterns similar to lin9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lin9 ENSDARG00000028475 77 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lin-9 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-030131-1747]
2. lgals3bpb ENSDARG00000040528 32 1.757 - - - - - 0.757 1.000 - - lectin, galactoside-binding, soluble, 3 binding protein b [Source:ZFIN;Acc:ZDB-GENE-040426-2262]
3. TNS3_1 TNS3_1 8 1.742 - - - - - 0.944 0.798 - -
4. fam217b ENSDARG00000088505 104 1.738 - - - - - 0.878 0.860 - - family with sequence similarity 217, member B [Source:ZFIN;Acc:ZDB-GENE-090313-236]
5. SLC25A22_1 SLC25A22_1 3 1.731 - - - - - 0.933 0.798 - -
6. si:dkey-4i23.7 si:dkey-4i23.7 19 1.719 - - 0.786 - - 0.933 - - -
7. si:dkeyp-67e1.6 ENSDARG00000073947, ENSDARG00000113513, ENSDARG00000113783 20 1.693 0.831 - 0.862 - - - - - - si:dkeyp-67e1.6 [Source:ZFIN;Acc:ZDB-GENE-061207-87]
8. si:ch1073-170o4.1 ENSDARG00000092780 18 1.67 - - 0.737 - - 0.933 - - - si:ch1073-170o4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7012]
9. BX465186.1 ENSDARG00000093047 28 1.669 0.736 - - - - 0.933 - - -
10. ripply2 ENSDARG00000070535 18 1.651 - - 0.853 - - - 0.798 - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
11. frs2a ENSDARG00000045873 148 1.64 0.709 - - - - 0.931 - - - fibroblast growth factor receptor substrate 2a [Source:ZFIN;Acc:ZDB-GENE-060503-462]
12. KCNJ15 ENSDARG00000058988 18 1.608 0.831 - - - - 0.777 - - - potassium voltage-gated channel subfamily J member 15 [Source:HGNC Symbol;Acc:HGNC:6261]
13. emilin2a ENSDARG00000061196 57 1.607 - 0.832 0.775 - - - - - - elastin microfibril interfacer 2a [Source:ZFIN;Acc:ZDB-GENE-060503-247]
14. si:ch73-369o7.3 si:ch73-369o7.3 20 1.599 0.822 - - - - 0.777 - - -
15. wu:fb63c12 26 1.593 0.831 - - - - 0.762 - - - wu:fb63c12
16. amer2 ENSDARG00000075222 594 1.589 0.834 - - - - - - - 0.755 APC membrane recruitment protein 2 [Source:ZFIN;Acc:ZDB-GENE-070719-5]
17. si:dkey-88j15.5 si:dkey-88j15.5 48 1.573 - - - - - 0.739 0.834 - -
18. CABZ01031170.1 CABZ01031170.1 137 1.572 0.845 0.727 - - - - - - -
19. CR388231.2 ENSDARG00000105547 25 1.57 - - 0.846 - 0.724 - - - - uncharacterized LOC101883418 [Source:NCBI gene;Acc:101883418]
20. CT030712.1 ENSDARG00000044355 83 1.569 0.824 - - 0.745 - - - - - uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
21. AP1S3 AP1S3 8 1.566 0.831 - - - - 0.735 - - -
22. FBXO48 ENSDARG00000086184 110 1.544 0.825 - - - - 0.719 - - - F-box protein 48 [Source:HGNC Symbol;Acc:HGNC:33857]
23. DHPS ENSDARG00000003270 85 1.537 0.831 - - - - - 0.706 - - deoxyhypusine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2001]
24. si:dkey-247i3.4 si:dkey-247i3.4 89 1.537 0.822 - 0.715 - - - - - -
25. ENSDARG00000074422 ENSDARG00000074422 61 1.529 - - - - - 0.731 0.798 - -
26. pmelb ENSDARG00000033760 206 1.527 0.771 - - - - - - - 0.756 premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
27. arhgef3l ENSDARG00000037554 23 1.523 - - - - - 0.777 0.746 - - Rho guanine nucleotide exchange factor (GEF) 3, like [Source:ZFIN;Acc:ZDB-GENE-050522-85]
28. otx2 766 1.522 0.753 - - - - - - - 0.769 orthodenticle homeobox 2, transcript variant X2
29. BRD8 ENSDARG00000055999 34 1.492 - - 0.703 - - - - - 0.789 bromodomain containing 8 [Source:HGNC Symbol;Acc:HGNC:19874]
30. si:ch211-195m9.3 ENSDARG00000096365 38 1.491 - - - - - 0.740 0.751 - - si:ch211-195m9.3 [Source:ZFIN;Acc:ZDB-GENE-120215-210]
31. si:dkey-261j4.3 ENSDARG00000035151 156 1.487 - - - - - 0.739 0.748 - - si:dkey-261j4.3 [Source:ZFIN;Acc:ZDB-GENE-060531-124]
32. rsg1 168 1.484 0.722 - - - - - 0.762 - - REM2 and RAB-like small GTPase 1, transcript variant X1
33. si:dkey-242k1.6 ENSDARG00000101205 112 1.433 - - - - - - 0.701 - 0.732 si:dkey-242k1.6 [Source:ZFIN;Acc:ZDB-GENE-041008-84]
34. CR383676.3_2 CR383676.3_2 9 1 - - - - - - 1.000 - -
35. nr5a1b ENSDARG00000023362 54 1 - - - - - - 1.000 - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
36. prkaa2 ENSDARG00000060641 12 1 - - - - - - 1.000 - - protein kinase, AMP-activated, alpha 2 catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081120-5]
37. fam26f 595 1 - - - - - - 1.000 - - family with sequence similarity 26, member F
38. arsa ENSDARG00000042270 74 1 - - - - - - 1.000 - - arylsulfatase A [Source:ZFIN;Acc:ZDB-GENE-050320-118]
39. zgc:174275 ENSDARG00000099845 172 1 - - - - - - 1.000 - - zgc:174275 [Source:ZFIN;Acc:ZDB-GENE-080305-5]
40. PEG3_19 PEG3_19 29 1 - - - - - - 1.000 - -
41. CABZ01038493.1 ENSDARG00000117625 983 1 - - - - - - 1.000 - -
42. SNORA57 SNORA57 148 1 - - - - - - 1.000 - -
43. TMEM245 ENSDARG00000070455 85 1 - - - - - - 1.000 - - transmembrane protein 245 [Source:ZFIN;Acc:ZDB-GENE-100922-188]
44. BX005410.2 BX005410.2 44 1 - - - - - - 1.000 - -
45. PEBP4 ENSDARG00000107065 4 0.959 - - - - - - 0.959 - - phosphatidylethanolamine binding protein 4 [Source:HGNC Symbol;Acc:HGNC:28319]
46. IYD IYD 8 0.953 - - - - - 0.953 - - -
47. BX511270.1 BX511270.1 25 0.944 - - - - - 0.944 - - -
48. QDPR QDPR 11 0.944 - - - - - 0.944 - - -
49. henmt1 ENSDARG00000018871 46 0.944 - - - - - 0.944 - - - HEN methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-387]
50. CABZ01067072.1 CABZ01067072.1 17 0.942 - - - - - - 0.942 - -
51. fam178a fam178a 29 0.933 - - - - - 0.933 - - -
52. si:ch73-236c18.7 ENSDARG00000098706 6 0.933 - - - - - 0.933 - - - si:ch73-236c18.7 [Source:ZFIN;Acc:ZDB-GENE-121214-3]
53. gpr155a ENSDARG00000090804 27 0.933 - - - - - 0.933 - - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
54. l3mbtl1a ENSDARG00000014828 119 0.933 - - - - - 0.933 - - - l(3)mbt-like 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090312-120]
55. fxyd6 ENSDARG00000100971 51 0.933 - - - - - 0.933 - - - FXYD domain containing ion transport regulator 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5919]
56. zgc:66432 zgc:66432 16 0.933 - - - - - 0.933 - - -
57. si:dkey-105h11.2 13 0.933 - - - - - 0.933 - - - si:dkey-105h11.2
58. ZNF337_14 ZNF337_14 4 0.933 - - - - - 0.933 - - -
59. si:ch211-244h4.1 si:ch211-244h4.1 1 0.933 - - - - - 0.933 - - -
60. polr2b ENSDARG00000098783 90 0.933 - - - - - 0.933 - - - polymerase (RNA) II (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-041008-1]
61. CR847844.2 ENSDARG00000102680 1 0.933 - - - - - 0.933 - - -
62. si:ch211-67e16.10 si:ch211-67e16.10 2 0.933 - - - - - 0.933 - - -
63. TNIP2 ENSDARG00000074501 35 0.933 - - - - - 0.933 - - - TNFAIP3 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-120913-2]
64. CABZ01053483.1 CABZ01053483.1 5 0.933 - - - - - 0.933 - - -
65. SYCP2L 3 0.933 - - - - - 0.933 - - - synaptonemal complex protein 2-like, transcript variant X3
66. si:dkey-182i3.9 ENSDARG00000096575 56 0.933 - - - - - 0.933 - - - si:dkey-182i3.9 [Source:ZFIN;Acc:ZDB-GENE-121214-310]
67. PRSS21 PRSS21 2 0.933 - - - - - 0.933 - - -
68. CR407588.1 ENSDARG00000115460 9 0.933 - - - - - 0.933 - - - SH3 and SYLF domain containing 1 [Source:NCBI gene;Acc:566522]
69. st6galnac1.2 ENSDARG00000043816 51 0.933 - - - - - 0.933 - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041014-161]
70. si:dkey-20d21.12 ENSDARG00000092123 38 0.933 - - - - - 0.933 - - - si:dkey-20d21.12 [Source:ZFIN;Acc:ZDB-GENE-081104-365]
71. tmem244 ENSDARG00000043847 3 0.933 - - - - - 0.933 - - - transmembrane protein 244 [Source:ZFIN;Acc:ZDB-GENE-040724-54]
72. inpp5jb ENSDARG00000093359 4 0.933 - - - - - 0.933 - - - inositol polyphosphate-5-phosphatase Jb [Source:ZFIN;Acc:ZDB-GENE-081104-46]
73. cpn1_2 ENSDARG00000005185, ENSDARG00000096728 14 0.933 - - - - - 0.933 - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
74. ptger4a ENSDARG00000059236 13 0.933 - - - - - 0.933 - - - prostaglandin E receptor 4 (subtype EP4) a [Source:ZFIN;Acc:ZDB-GENE-060222-1]
75. si:dkey-274m14.3 si:dkey-274m14.3 7 0.933 - - - - - 0.933 - - -
76. pde6g 8 0.933 - - - - - 0.933 - - - phosphodiesterase 6G, cGMP-specific, rod, gamma
77. ftr53 ENSDARG00000041220, ENSDARG00000110329, ENSDARG00000110400, ENSDARG00000116082 18 0.933 - - - - - 0.933 - - - finTRIM family, member 53 [Source:ZFIN;Acc:ZDB-GENE-030616-515]
78. nox1 ENSDARG00000087574 60 0.933 - - - - - 0.933 - - - NADPH oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-070404-1]
79. styxl1 ENSDARG00000026338 29 0.933 - - - - - 0.933 - - - serine/threonine/tyrosine interacting-like 1 [Source:ZFIN;Acc:ZDB-GENE-040912-45]
80. gja3 ENSDARG00000021889, ENSDARG00000116798 49 0.933 - - - - - 0.933 - - - gap junction protein, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-031217-3]
81. zgc:162969 2 0.933 - - - - - 0.933 - - - zgc:162969
82. fbxw9 ENSDARG00000058020 28 0.933 - - - - - 0.933 - - - F-box and WD repeat domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-091204-198]
83. si:dkeyp-87e3.3 si:dkeyp-87e3.3 68 0.933 - - - - - 0.933 - - -
84. crygm2d1 ENSDARG00000087324 258 0.933 - - - - - 0.933 - - - crystallin, gamma M2d1 [Source:ZFIN;Acc:ZDB-GENE-050522-395]
85. si:ch73-24k9.2 ENSDARG00000078912 2 0.933 - - - - - 0.933 - - - si:ch73-24k9.2 [Source:ZFIN;Acc:ZDB-GENE-121214-29]
86. C20H1orf95 C20H1orf95 12 0.933 - - - - - 0.933 - - -
87. nots ENSDARG00000099824 9 0.933 - - - - - 0.933 - - - nothepsin [Source:ZFIN;Acc:ZDB-GENE-010620-1]
88. zgc:162144 ENSDARG00000037603, ENSDARG00000109982 11 0.933 - - - - - 0.933 - - - zgc:162144 [Source:ZFIN;Acc:ZDB-GENE-030131-7630]
89. slc6a14 ENSDARG00000029866 61 0.933 - - - - - 0.933 - - - solute carrier family 6 (amino acid transporter), member 14 [Source:ZFIN;Acc:ZDB-GENE-130411-2]
90. CU855711.1 ENSDARG00000088643 6 0.933 - - - - - 0.933 - - - legumain-like [Source:NCBI gene;Acc:108191752]
91. si:dkey-6n3.3 si:dkey-6n3.3 9 0.933 - - - - - 0.933 - - -
92. ubxn10 ENSDARG00000052535 24 0.933 - - - - - 0.933 - - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
93. zgc:194125 ENSDARG00000113977 16 0.933 - - - - - 0.933 - - - zgc:194125 [Source:ZFIN;Acc:ZDB-GENE-080722-16]
94. si:ch211-224b1.5 si:ch211-224b1.5 139 0.933 - - - - - 0.933 - - -
95. si:dkeyp-27e10.6 si:dkeyp-27e10.6 36 0.933 - - - - - 0.933 - - -
96. MPPED1 ENSDARG00000088181 117 0.933 - - - - - 0.933 - - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
97. ms4a17a.6 ENSDARG00000007018 6 0.933 - - - - - 0.933 - - - membrane-spanning 4-domains, subfamily A, member 17A.6 [Source:ZFIN;Acc:ZDB-GENE-070209-265]
98. plod3 ENSDARG00000076317 46 0.933 - - - - - 0.933 - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-021031-4]
99. tmem72 ENSDARG00000069332 19 0.933 - - - - - 0.933 - - - transmembrane protein 72 [Source:ZFIN;Acc:ZDB-GENE-090313-175]
100. si:dkey-149i8.3 si:dkey-149i8.3 9 0.933 - - - - - 0.933 - - -

There are 799 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA