Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for limk1b

Gene Name Gene ID Reads Annotation
limk1b ENSDARG00000003022 172 LIM domain kinase 1b [Source:ZFIN;Acc:ZDB-GENE-110411-106]










Genes with expression patterns similar to limk1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. limk1b ENSDARG00000003022 172 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LIM domain kinase 1b [Source:ZFIN;Acc:ZDB-GENE-110411-106]
2. ccr12.3 ccr12.3 79 1.856 0.979 - - - - - 0.877 - -
3. mcat ENSDARG00000016613, ENSDARG00000096473 140 1.82 0.974 - - 0.846 - - - - - malonyl CoA:ACP acyltransferase (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-041111-231]
4. bicc1b ENSDARG00000070497 406 1.809 0.949 - - - - - 0.860 - - BicC family RNA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-080522-3]
5. si:ch211-113a14.10_1 si:ch211-113a14.10_1 59 1.747 0.838 - - - - - 0.909 - -
6. RPS6KA5 ENSDARG00000060551 109 1.732 0.933 - - - - 0.799 - - - ribosomal protein S6 kinase, polypeptide 5 [Source:ZFIN;Acc:ZDB-GENE-130530-693]
7. si:dkey-287i17.3 si:dkey-287i17.3 228 1.728 0.882 - - 0.846 - - - - -
8. CABZ01102038.1 ENSDARG00000116210 132 1.726 - 0.782 - - - - 0.944 - - growth arrest-specific 7b [Source:NCBI gene;Acc:100333627]
9. pcdh17 ENSDARG00000027041 260 1.717 0.869 - - 0.848 - - - - - protocadherin 17 [Source:ZFIN;Acc:ZDB-GENE-090608-3]
10. lsm1 ENSDARG00000043177 767 1.712 - - - - - 0.781 0.931 - - LSM1, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-040801-68]
11. C22H6orf89 C22H6orf89 1076 1.707 0.925 - - - - 0.782 - - -
12. rpap1 ENSDARG00000075072, ENSDARG00000117161 250 1.707 0.865 - - 0.842 - - - - - RNA polymerase II associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-090914-1]
13. prdm1b_1 ENSDARG00000098925 140 1.685 0.870 - - - - 0.815 - - - PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
14. si:dkey-238o14.5 si:dkey-238o14.5 450 1.684 0.905 - - - - 0.779 - - -
15. CABZ01111953.1 ENSDARG00000099747 38 1.68 0.975 0.705 - - - - - - - oxysterol-binding protein-related protein 10-like [Source:NCBI gene;Acc:100334085]
16. wbscr16 wbscr16 791 1.676 - - - 0.794 - - 0.882 - -
17. pld1b ENSDARG00000057125 325 1.666 0.904 - - 0.762 - - - - - phospholipase D1b [Source:ZFIN;Acc:ZDB-GENE-070510-3]
18. igsf9b ENSDARG00000010408 786 1.663 0.937 - - - - - 0.726 - - immunoglobulin superfamily, member 9b [Source:ZFIN;Acc:ZDB-GENE-060810-28]
19. adrb2a ENSDARG00000088124 324 1.655 - - - - - 0.851 0.804 - - adrenoceptor beta 2, surface a [Source:ZFIN;Acc:ZDB-GENE-100414-3]
20. DNAJC16_1 DNAJC16_1 245 1.641 - - - - - 0.757 0.884 - -
21. papss2a ENSDARG00000071021, ENSDARG00000110734, ENSDARG00000112597 49 1.628 - 0.734 - - - - 0.894 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 2a [Source:ZFIN;Acc:ZDB-GENE-061110-85]
22. FBXO4 ENSDARG00000074170 54 1.622 0.716 - - - - - 0.906 - - F-box protein 4 [Source:ZFIN;Acc:ZDB-GENE-081104-415]
23. ZFAT ENSDARG00000077987 205 1.622 - - - 0.915 - 0.707 - - - zinc finger and AT hook domain containing [Source:ZFIN;Acc:ZDB-GENE-130204-2]
24. pih1d1 ENSDARG00000037955 301 1.621 - - - 0.848 - - 0.773 - - PIH1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050309-147]
25. ly75 ENSDARG00000053113 196 1.615 - - - - - 0.764 0.851 - - lymphocyte antigen 75 [Source:ZFIN;Acc:ZDB-GENE-050309-166]
26. chid1 ENSDARG00000069673 675 1.613 0.842 - - 0.771 - - - - - chitinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9169]
27. casp6l1 ENSDARG00000025608, ENSDARG00000117004 107 1.61 - - - - - 0.734 0.876 - - caspase 6, apoptosis-related cysteine peptidase, like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-48]
28. clybl ENSDARG00000029729 690 1.606 0.900 0.706 - - - - - - - citrate lyase beta like [Source:ZFIN;Acc:ZDB-GENE-030516-6]
29. si:dkey-43f9.4 si:dkey-43f9.4 180 1.606 - 0.772 - 0.834 - - - - -
30. shcbp1 ENSDARG00000102068, ENSDARG00000113939 423 1.604 0.810 0.794 - - - - - - - SHC SH2-domain binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5865]
31. reep3l reep3l 608 1.589 0.855 - - - - 0.734 - - -
32. si:dkey-26g8.5 ENSDARG00000089750 7070 1.587 0.882 0.705 - - - - - - - si:dkey-26g8.5 [Source:ZFIN;Acc:ZDB-GENE-121214-19]
33. rad18 ENSDARG00000027938 574 1.575 - - - 0.818 - 0.757 - - - RAD18 E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-745]
34. FAM35A FAM35A 1091 1.57 0.744 - - - - - 0.826 - -
35. fuom ENSDARG00000039422 82 1.57 - - 0.702 0.868 - - - - - fucose mutarotase [Source:ZFIN;Acc:ZDB-GENE-030616-618]
36. shda ENSDARG00000094243 929 1.565 - - - 0.728 - - 0.837 - - Src homology 2 domain containing transforming protein D, a [Source:ZFIN;Acc:ZDB-GENE-070912-58]
37. nudt22 ENSDARG00000071671 411 1.565 - - - 0.841 - 0.724 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 22 [Source:ZFIN;Acc:ZDB-GENE-041010-171]
38. TRIM65 ENSDARG00000077098 991 1.555 - - - 0.825 - - 0.730 - - tripartite motif containing 65 [Source:ZFIN;Acc:ZDB-GENE-130613-1]
39. mtfr2 ENSDARG00000060394 482 1.55 0.718 - - - - 0.832 - - - mitochondrial fission regulator 2 [Source:ZFIN;Acc:ZDB-GENE-061013-398]
40. glb1 ENSDARG00000036415 80 1.538 0.810 - - - - - 0.728 - - galactosidase, beta 1 [Source:ZFIN;Acc:ZDB-GENE-050410-9]
41. slc6a13l 121 1.533 0.805 - - - - 0.728 - - - solute carrier family 6 (neurotransmitter transporter, GABA), member 13 like, transcript variant X2
42. abcd3b ENSDARG00000002947 220 1.532 0.725 - - - - 0.807 - - - ATP-binding cassette, sub-family D (ALD), member 3b [Source:ZFIN;Acc:ZDB-GENE-050517-29]
43. cnp ENSDARG00000070822 649 1.532 0.700 - - - - - 0.832 - - 2',3'-cyclic nucleotide 3' phosphodiesterase [Source:ZFIN;Acc:ZDB-GENE-030521-29]
44. apc ENSDARG00000058868 2605 1.524 - 0.730 - - - - 0.794 - - adenomatous polyposis coli [Source:ZFIN;Acc:ZDB-GENE-031112-7]
45. zgc:193682 zgc:193682 15 1.505 - - - - - 0.789 0.716 - -
46. gbp2 ENSDARG00000038669 91 1.504 - 0.705 - - - 0.799 - - - guanylate binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070912-618]
47. cfp ENSDARG00000094451 211 1.499 - 0.721 - - - - 0.778 - - complement factor properdin [Source:ZFIN;Acc:ZDB-GENE-030131-9247]
48. FAM132B FAM132B 39 1.495 - 0.705 - - - 0.790 - - -
49. CABZ01088330.1 CABZ01088330.1 679 1.494 0.715 - - 0.779 - - - - -
50. CABZ01084007.1 CABZ01084007.1 199 1.463 - - - 0.760 - 0.703 - - -
51. LRTM1 ENSDARG00000098742 21 1.457 - 0.721 - - 0.736 - - - - leucine rich repeats and transmembrane domains 1 [Source:ZFIN;Acc:ZDB-GENE-161221-2]
52. per1b ENSDARG00000012499 320 1.439 - 0.705 - 0.734 - - - - - period circadian clock 1b [Source:ZFIN;Acc:ZDB-GENE-040419-1]
53. nadka_1 ENSDARG00000006577, ENSDARG00000098313 544 1.421 - - - 0.705 - 0.716 - - - NAD kinase a [Source:ZFIN;Acc:ZDB-GENE-050417-39]
54. mxa ENSDARG00000021688 14 0.983 0.983 - - - - - - - - myxovirus (influenza) resistance A [Source:ZFIN;Acc:ZDB-GENE-030721-5]
55. si:dkey-93m18.6 ENSDARG00000093173 57 0.979 0.979 - - - - - - - - si:dkey-93m18.6 [Source:ZFIN;Acc:ZDB-GENE-091204-133]
56. si:dkey-6a5.10 si:dkey-6a5.10 17 0.979 0.979 - - - - - - - -
57. btr21 ENSDARG00000058329, ENSDARG00000100450 120 0.979 0.979 - - - - - - - - bloodthirsty-related gene family, member 21 [Source:ZFIN;Acc:ZDB-GENE-081031-80]
58. CR382327.4 CR382327.4 143 0.979 0.979 - - - - - - - -
59. CABZ01086801.1 CABZ01086801.1 41 0.979 0.979 - - - - - - - -
60. ahsg ahsg 39 0.979 0.979 - - - - - - - -
61. zgc:152951 ENSDARG00000068663, ENSDARG00000113135 22 0.979 0.979 - - - - - - - - zgc:152951 [Source:ZFIN;Acc:ZDB-GENE-060929-416]
62. CABZ01081656.1 CABZ01081656.1 14 0.979 0.979 - - - - - - - -
63. si:ch211-12e1.5 si:ch211-12e1.5 14 0.979 0.979 - - - - - - - -
64. PLA2G4C_3 PLA2G4C_3 14 0.979 0.979 - - - - - - - -
65. col5a2b ENSDARG00000024847 17 0.979 0.979 - - - - - - - - collagen, type V, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-110406-2]
66. mxtx1 ENSDARG00000069382 32 0.979 0.979 - - - - - - - - mix-type homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-000710-7]
67. si:dkey-149i8.3 si:dkey-149i8.3 9 0.979 0.979 - - - - - - - -
68. si:dkey-146n1.4 si:dkey-146n1.4 12 0.979 0.979 - - - - - - - -
69. U3_1 U3_1 61 0.979 0.979 - - - - - - - -
70. bmp6 ENSDARG00000015686 211 0.979 0.979 - - - - - - - - bone morphogenetic protein 6 [Source:ZFIN;Acc:ZDB-GENE-050306-42]
71. CT955987.1 CT955987.1 9 0.979 0.979 - - - - - - - -
72. ERICH1 18 0.979 0.979 - - - - - - - - glutamate rich 1
73. CABZ01038521.1 ENSDARG00000087306 10 0.979 0.979 - - - - - - - -
74. scpp5 ENSDARG00000078622 15 0.979 0.979 - - - - - - - - secretory calcium-binding phosphoprotein 5 [Source:ZFIN;Acc:ZDB-GENE-090313-256]
75. dapk1 ENSDARG00000060093 351 0.979 0.979 - - - - - - - - death-associated protein kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-177]
76. CABZ01074081.1 CABZ01074081.1 109 0.979 0.979 - - - - - - - -
77. rgs9b ENSDARG00000045156, ENSDARG00000111650 77 0.979 0.979 - - - - - - - - regulator of G protein signaling 9b [Source:ZFIN;Acc:ZDB-GENE-040426-1708]
78. GPR139 14 0.979 0.979 - - - - - - - - G protein-coupled receptor 139, transcript variant X1
79. cacng5a ENSDARG00000003326 17 0.979 0.979 - - - - - - - - calcium channel, voltage-dependent, gamma subunit 5a [Source:ZFIN;Acc:ZDB-GENE-120104-4]
80. si:dkey-15h8.11 si:dkey-15h8.11 1260 0.979 0.979 - - - - - - - -
81. LPHN3 LPHN3 195 0.978 0.978 - - - - - - - -
82. creb5b ENSDARG00000070536 9 0.977 0.977 - - - - - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
83. UBL7 UBL7 197 0.977 0.977 - - - - - - - -
84. ccdc113 ENSDARG00000006981 67 0.977 0.977 - - - - - - - - coiled-coil domain containing 113 [Source:ZFIN;Acc:ZDB-GENE-041010-163]
85. si:dkey-10g2.5 si:dkey-10g2.5 72 0.977 0.977 - - - - - - - -
86. opn1sw2 ENSDARG00000017274, ENSDARG00000115330 37 0.977 0.977 - - - - - - - - opsin 1 (cone pigments), short-wave-sensitive 2 [Source:ZFIN;Acc:ZDB-GENE-990604-40]
87. dgat1b ENSDARG00000054914 119 0.977 0.977 - - - - - - - - diacylglycerol O-acyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-040718-158]
88. tnfsf10l4 ENSDARG00000058068, ENSDARG00000111545 136 0.976 0.976 - - - - - - - - tumor necrosis factor (ligand) superfamily, member 10 like 4 [Source:ZFIN;Acc:ZDB-GENE-050227-6]
89. si:dkey-267k7.4 si:dkey-267k7.4 111 0.974 0.974 - - - - - - - -
90. rft1 ENSDARG00000060398 146 0.973 0.973 - - - - - - - - RFT1 homolog [Source:ZFIN;Acc:ZDB-GENE-110411-126]
91. slc30a10 ENSDARG00000103983 46 0.972 0.972 - - - - - - - - solute carrier family 30, member 10 [Source:ZFIN;Acc:ZDB-GENE-060608-2]
92. si:ch73-249k16.1 si:ch73-249k16.1 36 0.97 0.970 - - - - - - - -
93. mir148 75 0.97 0.970 - - - - - - - - microRNA 148
94. pnck ENSDARG00000043648 114 0.968 0.968 - - - - - - - - pregnancy up-regulated nonubiquitous CaM kinase [Source:ZFIN;Acc:ZDB-GENE-081105-127]
95. foxq1b ENSDARG00000055395 549 0.967 0.967 - - - - - - - - forkhead box Q1b [Source:ZFIN;Acc:ZDB-GENE-040426-2090]
96. ZNF784_4 ZNF784_4 113 0.966 0.966 - - - - - - - -
97. ftr51 ENSDARG00000029105 103 0.966 0.966 - - - - - - - - finTRIM family, member 51 [Source:ZFIN;Acc:ZDB-GENE-081104-54]
98. si:dkey-11f4.14 ENSDARG00000098461 35 0.966 0.966 - - - - - - - - si:dkey-11f4.14 [Source:ZFIN;Acc:ZDB-GENE-070912-355]
99. si:ch211-66k16.28 ENSDARG00000088423 80 0.965 0.965 - - - - - - - - si:ch211-66k16.28 [Source:ZFIN;Acc:ZDB-GENE-120709-59]
100. cab39l ENSDARG00000036658 204 0.965 0.965 - - - - - - - - calcium binding protein 39-like [Source:ZFIN;Acc:ZDB-GENE-041114-204]

There are 1421 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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