Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for lgi1b

Gene Name Gene ID Reads Annotation
lgi1b ENSDARG00000058421 12 leucine-rich, glioma inactivated 1b [Source:ZFIN;Acc:ZDB-GENE-060217-1]










Genes with expression patterns similar to lgi1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lgi1b ENSDARG00000058421 12 5 1.000 - 1.000 1.000 1.000 - - - 1.000 leucine-rich, glioma inactivated 1b [Source:ZFIN;Acc:ZDB-GENE-060217-1]
2. gper gper 4 1.951 1.000 - - - 0.951 - - - -
3. crygm2e ENSDARG00000044875 1 1.749 - - 0.749 - 1.000 - - - - crystallin, gamma M2e [Source:ZFIN;Acc:ZDB-GENE-081105-116]
4. arhgap15 ENSDARG00000062349 28 1.714 1.000 - - - 0.714 - - - - Rho GTPase activating protein 15 [Source:ZFIN;Acc:ZDB-GENE-070912-314]
5. st3gal1 ENSDARG00000079654 4 1.714 - - - 1.000 0.714 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060321-1]
6. BX511021.2 ENSDARG00000097646 5 1.603 - - - - 0.871 - - - 0.732
7. camkvl ENSDARG00000057000 40 1.527 - - 0.749 - 0.778 - - - - CaM kinase-like vesicle-associated, like [Source:ZFIN;Acc:ZDB-GENE-090311-58]
8. si:dkey-178e17.1 ENSDARG00000080000 4 1.481 - - 0.749 - - - - - 0.732 si:dkey-178e17.1 [Source:ZFIN;Acc:ZDB-GENE-081104-41]
9. si:dkey-11f7.4 si:dkey-11f7.4 1 1.463 - - 0.749 - 0.714 - - - -
10. piwil1 ENSDARG00000041699 21 1.433 - - 0.718 - 0.715 - - - - piwi-like RNA-mediated gene silencing 1 [Source:ZFIN;Acc:ZDB-GENE-030813-2]
11. FNDC7 FNDC7 0 1 - - - - 1.000 - - - -
12. zgc:123068 ENSDARG00000017489 15 1 - - - - 1.000 - - - - zgc:123068 [Source:ZFIN;Acc:ZDB-GENE-051030-98]
13. plscr3a ENSDARG00000093078 7 1 - - - - 1.000 - - - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
14. CABZ01072037.1 CABZ01072037.1 2 1 1.000 - - - - - - - -
15. CDHR5 CDHR5 2 1 1.000 - - - - - - - -
16. fmn1 ENSDARG00000011975 5 1 - - - - 1.000 - - - - formin 1 [Source:ZFIN;Acc:ZDB-GENE-041001-198]
17. zgc:153311 ENSDARG00000015964 85 1 - - - - 1.000 - - - - zgc:153311 [Source:ZFIN;Acc:ZDB-GENE-060825-194]
18. CR847906.1 ENSDARG00000099493 88 1 1.000 - - - - - - - - protein NLRC3-like [Source:NCBI gene;Acc:571651]
19. CR944667.3_1 ENSDARG00000117685 0 1 - - - - 1.000 - - - -
20. BX088691.1 BX088691.1 9 1 - - - 1.000 - - - - -
21. AL935293.1 AL935293.1 2 1 1.000 - - - - - - - -
22. ZNF407 ENSDARG00000087536 6 1 1.000 - - - - - - - - zinc finger protein 407 [Source:ZFIN;Acc:ZDB-GENE-110411-123]
23. itpr2 ENSDARG00000011909 3 1 - - - - 1.000 - - - - inositol 1,4,5-trisphosphate receptor, type 2 [Source:ZFIN;Acc:ZDB-GENE-050419-192]
24. efhb ENSDARG00000069703 9 1 - - - - 1.000 - - - - EF-hand domain family, member B [Source:ZFIN;Acc:ZDB-GENE-091001-1]
25. lpar5b ENSDARG00000068638 2 1 1.000 - - - - - - - - lysophosphatidic acid receptor 5b [Source:ZFIN;Acc:ZDB-GENE-081022-116]
26. rhoga ENSDARG00000068653 13 1 1.000 - - - - - - - - ras homolog family member Ga [Source:ZFIN;Acc:ZDB-GENE-060503-820]
27. CR356223.3 CR356223.3 0 1 - - - - 1.000 - - - -
28. si:dkey-153k10.6 10 1 - - - - 1.000 - - - - si:dkey-153k10.6, transcript variant X1
29. sntb1 ENSDARG00000041729 163 1 1.000 - - - - - - - - syntrophin, basic 1 [Source:ZFIN;Acc:ZDB-GENE-040704-13]
30. HEATR2 HEATR2 6 1 - - - - 1.000 - - - -
31. mgat4a ENSDARG00000063330 3 1 - - - - 1.000 - - - - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A [Source:ZFIN;Acc:ZDB-GENE-070912-27]
32. ENSDARG00000091766 ENSDARG00000091766 15 1 - - - - 1.000 - - - -
33. opa1 ENSDARG00000070801 57 1 1.000 - - - - - - - - optic atrophy 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-041114-7]
34. CU681842.3 CU681842.3 2 1 - - - - 1.000 - - - -
35. zgc:153116 ENSDARG00000077205 7 1 - - - - 1.000 - - - - zgc:153116 [Source:ZFIN;Acc:ZDB-GENE-060825-107]
36. slc25a37 ENSDARG00000073743 31 1 - - - - 1.000 - - - - solute carrier family 25 (mitochondrial iron transporter), member 37 [Source:ZFIN;Acc:ZDB-GENE-031118-202]
37. ZNF135_3 ZNF135_3 1 1 1.000 - - - - - - - -
38. nkiras2_1 ENSDARG00000052594 31 1 1.000 - - - - - - - - NFKB inhibitor interacting Ras-like 2 [Source:ZFIN;Acc:ZDB-GENE-040801-166]
39. si:dkey-78i1.2 si:dkey-78i1.2 15 1 1.000 - - - - - - - -
40. si:dkey-197d18.1 si:dkey-197d18.1 4 1 - - - - 1.000 - - - -
41. si:ch73-92e20.2 si:ch73-92e20.2 2 1 - - - - 1.000 - - - -
42. PSTPIP2 ENSDARG00000089569 1 1 - - - - 1.000 - - - - proline-serine-threonine phosphatase interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-90]
43. ftr53 ENSDARG00000041220, ENSDARG00000110329, ENSDARG00000110400, ENSDARG00000116082 18 1 - - - - 1.000 - - - - finTRIM family, member 53 [Source:ZFIN;Acc:ZDB-GENE-030616-515]
44. si:dkeyp-41f9.3 ENSDARG00000075600 2 1 - - - - 1.000 - - - - si:dkeyp-41f9.3 [Source:ZFIN;Acc:ZDB-GENE-091118-56]
45. ptpn20 ENSDARG00000075459 1 1 1.000 - - - - - - - - protein tyrosine phosphatase, non-receptor type 20 [Source:ZFIN;Acc:ZDB-GENE-090313-90]
46. si:dkey-47k16.1 si:dkey-47k16.1 5 1 - - - - 1.000 - - - -
47. CR854855.2 CR854855.2 1 1 - - - - 1.000 - - - -
48. C1S_1 C1S_1 11 1 1.000 - - - - - - - -
49. CU457819.2 ENSDARG00000105374 8 1 - - - - 1.000 - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
50. si:ch211-260b17.6 32 1 1.000 - - - - - - - - si:ch211-260b17.6
51. si:dkey-163m14.5 si:dkey-163m14.5 1 1 1.000 - - - - - - - -
52. DEPDC4 DEPDC4 1 1 - - - - 1.000 - - - -
53. si:dkeyp-46h3.8 ENSDARG00000093704 9 1 1.000 - - - - - - - - si:dkeyp-46h3.8 [Source:ZFIN;Acc:ZDB-GENE-060503-183]
54. BX004816.4 BX004816.4 33 1 - - - - 1.000 - - - -
55. CABZ01067232.1 ENSDARG00000057408 1 1 - - - - 1.000 - - - - otolin-1-like [Source:NCBI gene;Acc:101886389]
56. DUSP13_1 DUSP13_1 425 1 1.000 - - - - - - - -
57. pip4k2ab ENSDARG00000063544 1 1 - - - - 1.000 - - - - phosphatidylinositol-5-phosphate 4-kinase, type II, alpha b [Source:ZFIN;Acc:ZDB-GENE-070912-272]
58. fabp10a ENSDARG00000038439 4 1 1.000 - - - - - - - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
59. ZNF835 ZNF835 6 1 - - - - 1.000 - - - -
60. tecta ENSDARG00000059558 15 1 1.000 - - - - - - - - tectorin alpha [Source:ZFIN;Acc:ZDB-GENE-110411-120]
61. alkbh7 ENSDARG00000037906 9 1 - - - - 1.000 - - - - alkB homolog 7 [Source:ZFIN;Acc:ZDB-GENE-050417-78]
62. CU183952.1 CU183952.1 32 1 1.000 - - - - - - - -
63. mab21l3 ENSDARG00000076013, ENSDARG00000112160 35 1 1.000 - - - - - - - - mab-21-like 3 [Source:ZFIN;Acc:ZDB-GENE-070912-242]
64. WASF3 WASF3 1 1 - - - - 1.000 - - - -
65. slc25a15a ENSDARG00000063539 50 1 - - - - 1.000 - - - - solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15a [Source:ZFIN;Acc:ZDB-GENE-070112-1072]
66. abcg1 ENSDARG00000063475 97 1 1.000 - - - - - - - - ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
67. si:ch211-150j10.4 ENSDARG00000079336 23 1 1.000 - - - - - - - - si:ch211-150j10.4 [Source:ZFIN;Acc:ZDB-GENE-110411-215]
68. CR626884.3 ENSDARG00000104648 1 1 - - - - 1.000 - - - -
69. samsn1b ENSDARG00000078647 8 1 - - - - 1.000 - - - - SAM domain, SH3 domain and nuclear localisation signals 1b [Source:ZFIN;Acc:ZDB-GENE-041010-135]
70. si:ch211-175f12.2 ENSDARG00000095831 1 1 - - - - 1.000 - - - - si:ch211-175f12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-220]
71. htr6 ENSDARG00000016095 9 1 1.000 - - - - - - - - 5-hydroxytryptamine (serotonin) receptor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7839]
72. EFEMP1_1 EFEMP1_1 8 1 - - - 1.000 - - - - -
73. si:dkey-25o1.3 si:dkey-25o1.3 0 1 - - - - 1.000 - - - -
74. cep68 ENSDARG00000039411 30 1 1.000 - - - - - - - - centrosomal protein 68 [Source:ZFIN;Acc:ZDB-GENE-030616-565]
75. b3gntl1 ENSDARG00000043431 50 1 1.000 - - - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050913-133]
76. si:ch211-121a2.2 ENSDARG00000039682 1240 1 - - - - 1.000 - - - - si:ch211-121a2.2 [Source:ZFIN;Acc:ZDB-GENE-070705-21]
77. si:dkey-101n15.3 si:dkey-101n15.3 1 1 - - - - 1.000 - - - -
78. zdhhc24 ENSDARG00000105134, ENSDARG00000110259, ENSDARG00000116301 6 1 - - - - 1.000 - - - - zinc finger, DHHC-type containing 24 [Source:ZFIN;Acc:ZDB-GENE-040718-8]
79. si:dkey-61p9.11 ENSDARG00000096762, ENSDARG00000110448 2 1 1.000 - - - - - - - - si:dkey-61p9.11 [Source:ZFIN;Acc:ZDB-GENE-041210-242]
80. LRFN4 LRFN4 59 1 1.000 - - - - - - - -
81. si:ch211-168h21.3 10 1 1.000 - - - - - - - - si:ch211-168h21.3
82. KCNJ3_1 KCNJ3_1 30 1 - - - - 1.000 - - - -
83. neu3.2 ENSDARG00000010047, ENSDARG00000117176 68 1 - - - - 1.000 - - - - sialidase 3 (membrane sialidase), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040801-262]
84. si:ch211-223a10.3 si:ch211-223a10.3 3 1 - - - - 1.000 - - - -
85. si:dkey-54f18.2 si:dkey-54f18.2 27 1 1.000 - - - - - - - -
86. olfcw1 ENSDARG00000100604, ENSDARG00000109588 0 1 - - - - 1.000 - - - - olfactory receptor C family, w1 [Source:ZFIN;Acc:ZDB-GENE-050522-281]
87. RNF214_1 RNF214_1 5 1 1.000 - - - - - - - -
88. ctrl ENSDARG00000068680 18 1 1.000 - - - - - - - - chymotrypsin-like [Source:ZFIN;Acc:ZDB-GENE-040912-147]
89. si:dkey-240n22.2 si:dkey-240n22.2 2 1 - - - - 1.000 - - - -
90. oxtrl ENSDARG00000044175 10 1 1.000 - - - - - - - - oxytocin receptor like [Source:ZFIN;Acc:ZDB-GENE-110805-1]
91. CIT_1 CIT_1 6 1 - - - - 1.000 - - - -
92. matn3a ENSDARG00000069245 2410 1 1.000 - - - - - - - - matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]
93. znhit3 ENSDARG00000023950 61 1 1.000 - - - - - - - - zinc finger, HIT-type containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1114]
94. cx28.8 ENSDARG00000071042 62 1 1.000 - - - - - - - - connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
95. ANGPT2 ANGPT2 2 1 - - - - 1.000 - - - -
96. gna15.3 ENSDARG00000056654, ENSDARG00000092948 9 1 - - - 1.000 - - - - - guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-050208-700]
97. si:ch211-106n13.3 ENSDARG00000052633 3 1 - - - - 1.000 - - - - si:ch211-106n13.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9088]
98. si:ch211-267e7.11 si:ch211-267e7.11 0 1 - - - - 1.000 - - - -
99. CCDC37 CCDC37 10 1 1.000 - - - - - - - -
100. CABZ01090975.1 CABZ01090975.1 9 1 1.000 - - - - - - - -

There are 451 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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