Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for lemd3

Gene Name Gene ID Reads Annotation
lemd3 ENSDARG00000015824 2868 LEM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-490]










Genes with expression patterns similar to lemd3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. lemd3 ENSDARG00000015824 2868 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LEM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-490]
2. kifc1 ENSDARG00000001558 6658 2.196 - 0.747 - - - 0.730 0.719 - - kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
3. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 2.133 0.707 - - - - 0.714 0.712 - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
4. trpc4apa ENSDARG00000018840 2543 1.755 - 0.989 - 0.766 - - - - - transient receptor potential cation channel, subfamily C, member 4 associated protein a [Source:ZFIN;Acc:ZDB-GENE-000330-3]
5. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 1.744 - - - - - 0.763 - - 0.981 HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
6. rock1 ENSDARG00000058993 2603 1.738 - 0.993 - - - - 0.745 - - Rho-associated, coiled-coil containing protein kinase 1 [Source:ZFIN;Acc:ZDB-GENE-100712-2]
7. otub1a ENSDARG00000055536 2892 1.72 - 0.992 - - - - 0.728 - - OTU deubiquitinase, ubiquitin aldehyde binding 1a [Source:ZFIN;Acc:ZDB-GENE-040718-108]
8. CASK CASK 1750 1.719 - 0.996 - - - - 0.723 - -
9. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 1.718 - - - - - 0.738 - - 0.980 TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
10. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 10566 1.711 0.733 0.978 - - - - - - - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
11. histh1l ENSDARG00000035519 12293 1.705 - 0.729 - - - - - - 0.976 histone H1 like [Source:ZFIN;Acc:ZDB-GENE-050417-145]
12. NDNF ENSDARG00000062936 7287 1.701 - - - - - - 0.708 - 0.993 neuron-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-030131-207]
13. eif4e1c ENSDARG00000012274, ENSDARG00000116158 4768 1.693 - 0.944 - - - - 0.749 - - eukaryotic translation initiation factor 4E family member 1c [Source:ZFIN;Acc:ZDB-GENE-050417-398]
14. trim63 trim63 2437 1.689 0.710 0.979 - - - - - - -
15. adnp2b ENSDARG00000028431 4683 1.688 - - - - - - 0.708 - 0.980 ADNP homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5930]
16. eef1db ENSDARG00000030053 5185 1.641 - 0.934 - - - - 0.707 - - eukaryotic translation elongation factor 1 delta b (guanine nucleotide exchange protein) [Source:ZFIN;Acc:ZDB-GENE-030131-6544]
17. fut8 fut8 652 1.623 0.772 - - 0.851 - - - - -
18. C25H7orf60 C25H7orf60 699 1.569 0.828 - - - - - 0.741 - -
19. vps35 ENSDARG00000008224 13245 1.561 - 0.837 - - - - 0.724 - - vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2042]
20. paip2b ENSDARG00000008706 4255 1.549 - - - - - 0.802 0.747 - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
21. tbcb ENSDARG00000068404, ENSDARG00000109716 5098 1.527 - 0.826 - - - - 0.701 - - tubulin folding cofactor B [Source:ZFIN;Acc:ZDB-GENE-030131-9296]
22. cltcb ENSDARG00000090716 5544 1.525 - - - - - 0.798 0.727 - - clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
23. sik2b ENSDARG00000062315 1303 1.524 - - - 0.755 - - 0.769 - - salt-inducible kinase 2b [Source:ZFIN;Acc:ZDB-GENE-071012-1]
24. wu:fk48d07 wu:fk48d07 13245 1.517 0.703 0.814 - - - - - - -
25. setb ENSDARG00000003920 21788 1.511 - - - - - 0.758 0.753 - - SET nuclear proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-030131-433]
26. si:ch73-21k16.6 si:ch73-21k16.6 4896 1.503 0.732 - - - - 0.771 - - -
27. idh3b ENSDARG00000044753, ENSDARG00000110992 3965 1.489 - - - - - 0.749 0.740 - - isocitrate dehydrogenase 3 (NAD+) beta [Source:ZFIN;Acc:ZDB-GENE-040625-174]
28. map4k5 ENSDARG00000039125 1595 1.466 - - - 0.740 - - 0.726 - - mitogen-activated protein kinase kinase kinase kinase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6497]
29. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 1.459 - - - - - 0.723 0.736 - - ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
30. pomp ENSDARG00000032296 4439 1.44 - - - - - 0.733 0.707 - - proteasome maturation protein [Source:ZFIN;Acc:ZDB-GENE-040801-10]
31. wnt4a ENSDARG00000071208 1157 1.426 0.717 - - - - - - 0.709 - wingless-type MMTV integration site family, member 4a [Source:ZFIN;Acc:ZDB-GENE-980526-352]
32. rnps1 ENSDARG00000116743 9994 1.412 - 0.704 - - - 0.708 - - - RNA binding protein S1, serine-rich domain [Source:NCBI gene;Acc:327020]
33. pcm1 ENSDARG00000062198, ENSDARG00000112178 2912 0.999 - - - - - - - - 0.999 pericentriolar material 1 [Source:ZFIN;Acc:ZDB-GENE-030131-428]
34. CT955984.1 ENSDARG00000113577 1482 0.998 - - - - - - - - 0.998
35. arih1 ENSDARG00000003616, ENSDARG00000109413 1739 0.998 - 0.998 - - - - - - - ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5213]
36. il1rapl1a ENSDARG00000062045, ENSDARG00000115285 1200 0.998 - - - - - - - - 0.998 interleukin 1 receptor accessory protein-like 1a [Source:ZFIN;Acc:ZDB-GENE-061013-249]
37. bin3 ENSDARG00000099651 3295 0.998 - - - - - - - - 0.998 bridging integrator 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2696]
38. fam50a ENSDARG00000024895 3020 0.998 - - - - - - - - 0.998 family with sequence similarity 50, member A [Source:ZFIN;Acc:ZDB-GENE-050417-110]
39. mkln1 ENSDARG00000025576 1122 0.998 - - - - - - - - 0.998 muskelin 1, intracellular mediator containing kelch motifs [Source:ZFIN;Acc:ZDB-GENE-030131-3942]
40. IGLON5 ENSDARG00000022176 1353 0.998 - - - - - - - - 0.998 IgLON family member 5 [Source:HGNC Symbol;Acc:HGNC:34550]
41. zgc:171759_4 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 327 0.998 - 0.998 - - - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
42. SHROOM2 SHROOM2 934 0.998 - - - - - - - - 0.998
43. snapin ENSDARG00000062382 1531 0.998 - - - - - - - - 0.998 SNAP-associated protein [Source:ZFIN;Acc:ZDB-GENE-060503-343]
44. kif3cb ENSDARG00000079500 935 0.998 - - - - - - - - 0.998 kinesin family member 3Cb [Source:ZFIN;Acc:ZDB-GENE-080709-4]
45. ATL2 ENSDARG00000057719, ENSDARG00000113378, ENSDARG00000113487 1987 0.998 - - - - - - - - 0.998 atlastin GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6505]
46. ATP10B ENSDARG00000076230 989 0.998 - - - - - - - - 0.998 ATPase phospholipid transporting 10B [Source:ZFIN;Acc:ZDB-GENE-130530-796]
47. slc37a4a ENSDARG00000038106 1375 0.998 - - - - - - - - 0.998 solute carrier family 37 (glucose-6-phosphate transporter), member 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2230]
48. TMEM254 ENSDARG00000109902 3377 0.998 - - - - - - - - 0.998 transmembrane protein 254 [Source:ZFIN;Acc:ZDB-GENE-040426-1348]
49. arl8bb ENSDARG00000070318 1428 0.998 - - - - - - - - 0.998 ADP-ribosylation factor-like 8Bb [Source:ZFIN;Acc:ZDB-GENE-080516-10]
50. kif3a ENSDARG00000087538, ENSDARG00000109880, ENSDARG00000117005 1216 0.997 - 0.997 - - - - - - - kinesin family member 3A [Source:ZFIN;Acc:ZDB-GENE-050417-71]
51. zgc:113208 ENSDARG00000035610, ENSDARG00000109302 1095 0.997 - 0.997 - - - - - - - zgc:113208 [Source:ZFIN;Acc:ZDB-GENE-050417-450]
52. atg5 ENSDARG00000023396 1726 0.997 - - - - - - - - 0.997 ATG5 autophagy related 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040801-149]
53. asb4 ENSDARG00000034988 1115 0.997 - - - - - - - - 0.997 ankyrin repeat and SOCS box containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-100]
54. mrpl12 ENSDARG00000038768 5539 0.997 - - - - - - - - 0.997 mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
55. ttc3 ENSDARG00000086075 2157 0.997 - 0.997 - - - - - - - tetratricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-090313-3]
56. marveld2a ENSDARG00000025076 917 0.997 - 0.997 - - - - - - - MARVEL domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050411-59]
57. ptrhd1 ENSDARG00000016122 2705 0.997 - - - - - - - - 0.997 peptidyl-tRNA hydrolase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081110-2]
58. snx16 ENSDARG00000046072 931 0.997 - 0.997 - - - - - - - sorting nexin 16 [Source:ZFIN;Acc:ZDB-GENE-040426-1832]
59. PDPR ENSDARG00000103288 711 0.997 - 0.997 - - - - - - - pyruvate dehydrogenase phosphatase regulatory subunit [Source:HGNC Symbol;Acc:HGNC:30264]
60. rbms2b ENSDARG00000056150, ENSDARG00000115483 2104 0.997 - - - - - - - - 0.997 RNA binding motif, single stranded interacting protein 2b [Source:ZFIN;Acc:ZDB-GENE-040801-51]
61. FRMD4A ENSDARG00000042249 2883 0.997 - - - - - - - - 0.997 FERM domain containing 4A [Source:HGNC Symbol;Acc:HGNC:25491]
62. zgc:162608 ENSDARG00000069375 2881 0.997 - - - - - - - - 0.997 zgc:162608 [Source:ZFIN;Acc:ZDB-GENE-070410-86]
63. NEDD4 NEDD4 2040 0.997 - - - - - - - - 0.997
64. txndc17 ENSDARG00000058079 3533 0.997 - - - - - - - - 0.997 thioredoxin domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-040801-193]
65. si:ch211-262h13.3 ENSDARG00000070898 2094 0.997 - - - - - - - - 0.997 si:ch211-262h13.3 [Source:ZFIN;Acc:ZDB-GENE-050208-532]
66. psma6b ENSDARG00000013966 4410 0.997 - - - - - - - - 0.997 proteasome subunit alpha 6b [Source:ZFIN;Acc:ZDB-GENE-040718-329]
67. cdc25 cdc25 3913 0.997 - - - - - - - - 0.997
68. pigk ENSDARG00000024479 1386 0.997 - - - - - - - - 0.997 phosphatidylinositol glycan anchor biosynthesis, class K [Source:ZFIN;Acc:ZDB-GENE-040625-162]
69. bcl6a ENSDARG00000070864, ENSDARG00000111395, ENSDARG00000112502, ENSDARG00000116260 657 0.997 - 0.997 - - - - - - - B-cell CLL/lymphoma 6a (zinc finger protein 51) [Source:ZFIN;Acc:ZDB-GENE-040426-1696]
70. gle1 ENSDARG00000043559 1362 0.997 - 0.997 - - - - - - - GLE1 RNA export mediator homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040831-4]
71. palld ENSDARG00000040009 2381 0.997 - - - - - - - - 0.997 palladin, cytoskeletal associated protein [Source:ZFIN;Acc:ZDB-GENE-041014-252]
72. si:dkey-22o12.7 si:dkey-22o12.7 1812 0.997 - 0.997 - - - - - - -
73. snrnp27 ENSDARG00000035625 9080 0.997 - - - - - - - - 0.997 small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
74. rufy3 ENSDARG00000029692 3031 0.997 - - - - - - - - 0.997 RUN and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-58]
75. exoc1 ENSDARG00000043019 819 0.997 - 0.997 - - - - - - - exocyst complex component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1057]
76. dnajb5 ENSDARG00000052881, ENSDARG00000116664 885 0.996 - 0.996 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 5 [Source:ZFIN;Acc:ZDB-GENE-070705-308]
77. si:ch211-129c21.1 ENSDARG00000024775 371 0.996 - 0.996 - - - - - - - si:ch211-129c21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5796]
78. wu:fb12e11 wu:fb12e11 2332 0.996 - 0.996 - - - - - - -
79. si:ch211-133l11.10 ENSDARG00000005626 381 0.996 - 0.996 - - - - - - - si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
80. CR293507.1 ENSDARG00000112572 3198 0.996 - 0.996 - - - - - - -
81. CABZ01057907.1 CABZ01057907.1 1140 0.996 - 0.996 - - - - - - -
82. CTIF ENSDARG00000090617 270 0.996 - 0.996 - - - - - - - CBP80/20-dependent translation initiation factor [Source:ZFIN;Acc:ZDB-GENE-130530-1003]
83. GRAMD1B GRAMD1B 311 0.996 - 0.996 - - - - - - -
84. STARD7 ENSDARG00000074858 889 0.996 - 0.996 - - - - - - - StAR-related lipid transfer (START) domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-030131-2310]
85. cdc14b ENSDARG00000021483 4958 0.996 - 0.996 - - - - - - - cell division cycle 14B [Source:ZFIN;Acc:ZDB-GENE-040426-820]
86. atoh8 ENSDARG00000037555, ENSDARG00000110248 2059 0.996 - 0.996 - - - - - - - atonal bHLH transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-061215-7]
87. ENSDARG00000096553 ENSDARG00000096553 388 0.996 - 0.996 - - - - - - -
88. uck2a ENSDARG00000006074 1554 0.996 - 0.996 - - - - - - - uridine-cytidine kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7158]
89. lpar2b ENSDARG00000042561 1086 0.996 - 0.996 - - - - - - - lysophosphatidic acid receptor 2b [Source:ZFIN;Acc:ZDB-GENE-051120-99]
90. prkab1a ENSDARG00000044183 264 0.996 - 0.996 - - - - - - - protein kinase, AMP-activated, beta 1 non-catalytic subunit, a [Source:ZFIN;Acc:ZDB-GENE-040718-377]
91. supt20 ENSDARG00000078658 713 0.996 - 0.996 - - - - - - - SPT20 homolog, SAGA complex component [Source:ZFIN;Acc:ZDB-GENE-091204-264]
92. cenpf ENSDARG00000055133 5267 0.996 - - - - - - - - 0.996 centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
93. acmsd ENSDARG00000062549 201 0.996 - 0.996 - - - - - - - aminocarboxymuconate semialdehyde decarboxylase [Source:ZFIN;Acc:ZDB-GENE-070410-103]
94. farp1 ENSDARG00000074381 406 0.996 - 0.996 - - - - - - - FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) [Source:ZFIN;Acc:ZDB-GENE-070424-163]
95. SLC6A16_1 SLC6A16_1 1130 0.996 - 0.996 - - - - - - -
96. sgce ENSDARG00000012138 912 0.996 - 0.996 - - - - - - - sarcoglycan, epsilon [Source:ZFIN;Acc:ZDB-GENE-030724-1]
97. tbc1d23 ENSDARG00000044357, ENSDARG00000109696 6272 0.996 - 0.996 - - - - - - - TBC1 domain family, member 23 [Source:ZFIN;Acc:ZDB-GENE-040426-1253]
98. gtf2f1 ENSDARG00000032129 3041 0.996 - 0.996 - - - - - - - general transcription factor IIF, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4557]
99. ypel1 ENSDARG00000035630, ENSDARG00000112717 739 0.995 - 0.995 - - - - - - - yippee-like 1 [Source:ZFIN;Acc:ZDB-GENE-040808-41]
100. tmem110 497 0.995 - 0.995 - - - - - - - transmembrane protein 110

There are 780 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA