Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ldlrap1b

Gene Name Gene ID Reads Annotation
ldlrap1b ENSDARG00000039750 2 low density lipoprotein receptor adaptor protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-1012]










Genes with expression patterns similar to ldlrap1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ldlrap1b ENSDARG00000039750 2 3 - - 1.000 - - - - 1.000 1.000 low density lipoprotein receptor adaptor protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-1012]
2. SYNPO 2 2 - - 1.000 - - - - - 1.000 synaptopodin, transcript variant X2
3. si:dkey-14d8.1 ENSDARG00000095332 11 1.776 - - - - - - - 0.776 1.000 si:dkey-14d8.1 [Source:ZFIN;Acc:ZDB-GENE-041210-86]
4. CR391967.1 CR391967.1 135 1.706 - - 0.899 - - - - - 0.807
5. pomcb ENSDARG00000069307 72 1.673 - - 0.739 - - - - - 0.934 proopiomelanocortin b [Source:ZFIN;Acc:ZDB-GENE-041014-294]
6. CABZ01030692.1 CABZ01030692.1 0 1 - - - - - - - - 1.000
7. si:ch211-12e13.12 ENSDARG00000094737 1 1 - - - - - - - - 1.000 si:ch211-12e13.12 [Source:ZFIN;Acc:ZDB-GENE-070424-121]
8. cyp2n13 ENSDARG00000042953 10 1 - - - - - - - - 1.000 cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
9. si:dkey-179k24.6 si:dkey-179k24.6 5 1 - - - - - - - - 1.000
10. CU302316.1 ENSDARG00000109600 2 1 - - - - - - - - 1.000
11. scn1a 8 1 - - - - - - - - 1.000 sodium channel, voltage-gated, type I, alpha, transcript variant X1
12. vtg4 ENSDARG00000078429, ENSDARG00000116698 0 1 - - - - - - - - 1.000 vitellogenin 4 [Source:ZFIN;Acc:ZDB-GENE-001201-3]
13. CR318624.1 ENSDARG00000094618 5 1 - - - - - - - - 1.000
14. MYO1G ENSDARG00000036104 1 1 - - - - - - - - 1.000 myosin IG [Source:HGNC Symbol;Acc:HGNC:13880]
15. slc15a1b ENSDARG00000044528 6 1 - - - - - - - - 1.000 solute carrier family 15 (oligopeptide transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4661]
16. si:dkey-149m13.2 si:dkey-149m13.2 1 1 - - - - - - - - 1.000
17. si:dkey-220o10.3 si:dkey-220o10.3 0 1 - - - - - - - - 1.000
18. mvb12bb ENSDARG00000079478 9 1 - - - - - - - - 1.000 multivesicular body subunit 12Bb [Source:ZFIN;Acc:ZDB-GENE-080414-2]
19. TMPRSS7 5 1 - - - - - - - - 1.000 transmembrane protease, serine 7
20. si:ch211-254p10.2 ENSDARG00000056750 3 1 - - - - - - - - 1.000 si:ch211-254p10.2 [Source:ZFIN;Acc:ZDB-GENE-100922-17]
21. CCDC66 2 1 - - - - - - - - 1.000 coiled-coil domain containing 66
22. SSTR2 SSTR2 12 1 - - - - - - - - 1.000
23. DNAJC11 1 1 - - - - - - - - 1.000 DnaJ heat shock protein family (Hsp40) member C11
24. BX927130.1 ENSDARG00000099328 7 1 - - - - - - - - 1.000 si:dkey-27n6.5 [Source:NCBI gene;Acc:557869]
25. cdc14aa ENSDARG00000013858 18 1 - - - - - - - - 1.000 cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
26. si:dkey-93m18.5 si:dkey-93m18.5 2 1 - - - - - - - - 1.000
27. htr5al htr5al 6 1 - - - - - - - - 1.000
28. wisp2 ENSDARG00000077882 3 1 - - - - - - - - 1.000 WNT1 inducible signaling pathway protein 2 [Source:ZFIN;Acc:ZDB-GENE-060223-1]
29. si:ch1073-109g21.1 si:ch1073-109g21.1 0 1 - - - - - - - - 1.000
30. zgc:92161 ENSDARG00000101749 27 1 - - - - - - - - 1.000 zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
31. si:ch211-215l11.8 si:ch211-215l11.8 0 1 - - - - - - - - 1.000
32. SLCO2B1 ENSDARG00000054609 0 1 - - - - - - - - 1.000 solute carrier organic anion transporter family, member 2B1 [Source:ZFIN;Acc:ZDB-GENE-051023-6]
33. lifra ENSDARG00000098857 11 1 - - - - - - - - 1.000 leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
34. MEI1 MEI1 2 1 - - - - - - - - 1.000
35. gba ENSDARG00000076058 1 1 - - - - - - - - 1.000 glucosidase, beta, acid [Source:ZFIN;Acc:ZDB-GENE-100922-270]
36. FP102016.2 FP102016.2 0 1 - - - - - - - - 1.000
37. si:dkey-199k11.5 si:dkey-199k11.5 4 1 - - - - - - - - 1.000
38. CR457462.1 CR457462.1 11 1 - - - - - - - - 1.000
39. KIAA0319 KIAA0319 2 1 - - - - - - - - 1.000
40. CT737184.1 ENSDARG00000102726 0 1 - - - - - - - - 1.000
41. si:ch1073-351l9.1 si:ch1073-351l9.1 1 1 - - - - - - - - 1.000
42. apba1a ENSDARG00000103848 0 1 - - - - - - - - 1.000 amyloid beta (A4) precursor protein-binding, family A, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-175]
43. CR394568.1 CR394568.1 0 1 - - - - - - - - 1.000
44. CABZ01074669.1 CABZ01074669.1 12 1 - - - - - - - - 1.000
45. si:rp71-7l19.6 si:rp71-7l19.6 12 1 - - - - - - - - 1.000
46. BX119910.4 BX119910.4 0 1 - - - - - - - - 1.000
47. si:ch73-341k19.1 ENSDARG00000095946 5 1 - - - - - - - - 1.000 si:ch73-341k19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-201]
48. si:dkey-82i20.3 si:dkey-82i20.3 6 1 - - - - - - - - 1.000
49. dcp2_1 ENSDARG00000104242 74 1 - - - - - - - - 1.000 decapping mRNA 2 [Source:ZFIN;Acc:ZDB-GENE-040426-851]
50. slc47a2 2 1 - - - - - - - - 1.000 solute carrier family 47 (multidrug and toxin extrusion), member 2
51. si:dkeyp-51f11.3 si:dkeyp-51f11.3 0 1 - - - - - - - - 1.000
52. clec3ba ENSDARG00000076541 3 1 - - - - - - - - 1.000 C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
53. FIG4 ENSDARG00000107912 0 1 - - - - - - - - 1.000 FIG4 phosphoinositide 5-phosphatase [Source:HGNC Symbol;Acc:HGNC:16873]
54. si:ch211-170d8.5 ENSDARG00000046142 0 1 - - - - - - - - 1.000 si:ch211-170d8.5 [Source:ZFIN;Acc:ZDB-GENE-081105-120]
55. si:dkey-4j21.1 17 1 - - - - - - - - 1.000 si:dkey-4j21.1, transcript variant X2
56. CDK18 ENSDARG00000012204 5 1 - - - - - - - - 1.000 cyclin dependent kinase 18 [Source:HGNC Symbol;Acc:HGNC:8751]
57. si:ch211-113a14.19_5 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 2 1 - - - - - - - - 1.000 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
58. agtr1a ENSDARG00000018616 1 1 - - - - - - - - 1.000 angiotensin II receptor, type 1a [Source:ZFIN;Acc:ZDB-GENE-070912-546]
59. si:dkey-150h13.1 si:dkey-150h13.1 1 1 - - - - - - - - 1.000
60. si:ch211-214p13.7 1 1 - - - - - - - - 1.000 si:ch211-214p13.7
61. LIX1 ENSDARG00000052154 9 1 - - - - - - - - 1.000 limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
62. si:ch211-198e13.3 5 1 - - - - - - - - 1.000 si:ch211-198e13.3, transcript variant X1
63. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 1 - - - - - - - - 1.000 solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
64. zgc:162724 zgc:162724 9 1 - - - - - - - - 1.000
65. vcam1a ENSDARG00000078201 1 1 - - - - - - - - 1.000 vascular cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-060503-172]
66. CT030048.2 CT030048.2 3 1 - - - - - - - - 1.000
67. C17H8orf74 C17H8orf74 4 1 - - - - - - - - 1.000
68. ttc6 ENSDARG00000104125 7 1 - - - - - - - - 1.000 tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
69. CDR2_1 CDR2_1 8 1 - - - - - - - - 1.000
70. HMGXB3 ENSDARG00000077823 2 1 - - - - - - - - 1.000 HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
71. si:ch211-145m1.3 3 1 - - - - - - - - 1.000 si:ch211-145m1.3
72. FP103003.1_1 FP103003.1_1 6 1 - - - - - - - - 1.000
73. ptger2a ENSDARG00000011434 6 1 - - - - - - - - 1.000 prostaglandin E receptor 2a (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040426-1321]
74. si:zfos-979f1.2 ENSDARG00000011652 24 1 - - - - - - - - 1.000 si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
75. CYP27A1_2 CYP27A1_2 5 1 - - - - - - - - 1.000
76. NPM2 NPM2 41 1 - - - - - - - - 1.000
77. PDE6H 3 1 - - - - - - - - 1.000 phosphodiesterase 6H, cGMP-specific, cone, gamma, transcript variant 2
78. ptx4 ENSDARG00000038072 2 1 - - - - - - - - 1.000 pentraxin 4, long [Source:ZFIN;Acc:ZDB-GENE-120215-70]
79. mybpc2a ENSDARG00000030157 11 1 - - - - - - - - 1.000 myosin binding protein C, fast type a [Source:ZFIN;Acc:ZDB-GENE-060901-1]
80. si:dkey-274m14.3 si:dkey-274m14.3 7 1 - - - - - - - - 1.000
81. si:ch211-89o5.3 si:ch211-89o5.3 5 1 - - - - - - - - 1.000
82. trim66 ENSDARG00000054332 16 1 - - 1.000 - - - - - - tripartite motif containing 66 [Source:ZFIN;Acc:ZDB-GENE-040724-145]
83. DSEL DSEL 1 1 - - - - - - - - 1.000
84. FAM46D FAM46D 0 1 - - - - - - - - 1.000
85. si:dkey-188i13.8 ENSDARG00000092725 1 1 - - - - - - - - 1.000 si:dkey-188i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-93]
86. tusc3 ENSDARG00000078854 4 1 - - - - - - - - 1.000 tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
87. CABZ01056274.1 CABZ01056274.1 3 1 - - - - - - - - 1.000
88. si:dkey-276l13.5 si:dkey-276l13.5 3 1 - - - - - - - - 1.000
89. TAAR1 TAAR1 0 1 - - - - - - - - 1.000
90. GABRA2 ENSDARG00000113737 5 1 - - - - - - - - 1.000 gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
91. GLRA2 ENSDARG00000075012, ENSDARG00000114839 0 1 - - - - - - - - 1.000 glycine receptor, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-090407-1]
92. SEMA4F ENSDARG00000100308 1 1 - - - - - - - - 1.000 ssemaphorin 4F [Source:HGNC Symbol;Acc:HGNC:10734]
93. si:ch211-113a14.19_1 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 15 1 - - - - - - - - 1.000 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
94. slc35c1 ENSDARG00000104669 65 1 - - - - - - - - 1.000 solute carrier family 35 (GDP-fucose transporter), member C1 [Source:ZFIN;Acc:ZDB-GENE-041212-11]
95. si:ch211-233m11.1 ENSDARG00000074653 1 1 - - - - - - - - 1.000 si:ch211-233m11.1 [Source:ZFIN;Acc:ZDB-GENE-081028-16]
96. si:ch73-177h5.2 ENSDARG00000020812 0 1 - - - - - - - - 1.000 si:ch73-177h5.2 [Source:ZFIN;Acc:ZDB-GENE-081104-247]
97. org ENSDARG00000076474 16 1 - - - - - - - - 1.000 oogenesis-related gene [Source:ZFIN;Acc:ZDB-GENE-050208-584]
98. rhbdd3 ENSDARG00000079816 2 1 - - - - - - - - 1.000 rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
99. si:ch211-215m21.29 si:ch211-215m21.29 5 1 - - - - - - - - 1.000
100. 5S_rRNA_13 5S_rRNA_13 0 1 - - - - - - - - 1.000

There are 221 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA