Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for isl2a

Gene Name Gene ID Reads Annotation
isl2a ENSDARG00000003971 971 ISL LIM homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-562]










Genes with expression patterns similar to isl2a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. isl2a ENSDARG00000003971 971 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ISL LIM homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-562]
2. polr3glb ENSDARG00000013734 1199 1.567 - 0.790 - - - 0.777 - - - polymerase (RNA) III (DNA directed) polypeptide G like b [Source:ZFIN;Acc:ZDB-GENE-041010-32]
3. uba3 ENSDARG00000057987, ENSDARG00000116639 1181 1.518 - 0.815 - - - - 0.703 - - ubiquitin-like modifier activating enzyme 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2825]
4. rad54l2 ENSDARG00000063031 821 1.504 - 0.710 - - - 0.794 - - - RAD54 like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3097]
5. insm1b ENSDARG00000053301 2032 1.475 - 0.750 - - - 0.725 - - - insulinoma-associated 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2602]
6. kirrel3a ENSDARG00000075806 36 1.467 - 0.765 - - - 0.702 - - - kirre like nephrin family adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-091117-44]
7. evx1 ENSDARG00000099365, ENSDARG00000100087 609 1.459 - 0.759 - - - - 0.700 - - even-skipped homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-364]
8. arl3 ENSDARG00000071409, ENSDARG00000113228 2130 1.457 - - - - - 0.720 0.737 - - ADP-ribosylation factor-like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7518]
9. itpk1 itpk1 425 0.913 - 0.913 - - - - - - -
10. ypel3 ENSDARG00000055510 1344 0.907 - 0.907 - - - - - - - yippee-like 3 [Source:ZFIN;Acc:ZDB-GENE-030516-4]
11. hoxd13a ENSDARG00000059256 1190 0.904 - 0.904 - - - - - - - homeobox D13a [Source:ZFIN;Acc:ZDB-GENE-990415-119]
12. spast ENSDARG00000024933 557 0.896 - 0.896 - - - - - - - spastin [Source:ZFIN;Acc:ZDB-GENE-040426-2331]
13. zdhhc13 ENSDARG00000101144 647 0.893 - 0.893 - - - - - - - zinc finger, DHHC-type containing 13 [Source:ZFIN;Acc:ZDB-GENE-041212-79]
14. CREB3L4 1085 0.884 - 0.884 - - - - - - - cAMP responsive element binding protein 3-like 4
15. elf3 ENSDARG00000077982 211 0.881 - 0.881 - - - - - - - E74-like factor 3 (ets domain transcription factor, epithelial-specific ) [Source:ZFIN;Acc:ZDB-GENE-030131-8760]
16. retsat ENSDARG00000018600 832 0.877 - 0.877 - - - - - - - retinol saturase (all-trans-retinol 13,14-reductase) [Source:ZFIN;Acc:ZDB-GENE-050320-11]
17. si:ch211-253p2.2 ENSDARG00000071772 64 0.876 - 0.876 - - - - - - - si:ch211-253p2.2 [Source:ZFIN;Acc:ZDB-GENE-041111-272]
18. ZACN ZACN 502 0.875 - 0.875 - - - - - - -
19. nipal3 ENSDARG00000021147, ENSDARG00000109606 1058 0.875 - 0.875 - - - - - - - NIPA like domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040718-379]
20. si:rp71-1i20.2 ENSDARG00000043198 113 0.875 - 0.875 - - - - - - - si:rp71-1i20.2 [Source:ZFIN;Acc:ZDB-GENE-040724-207]
21. scinlb ENSDARG00000058348 1466 0.869 - 0.869 - - - - - - - scinderin like b [Source:ZFIN;Acc:ZDB-GENE-040426-2068]
22. sulf2 sulf2 1286 0.867 - - - - - 0.867 - - -
23. ca4c ENSDARG00000044512 102 0.863 - 0.863 - - - - - - - carbonic anhydrase IV c [Source:ZFIN;Acc:ZDB-GENE-080815-6]
24. zgc:153738 ENSDARG00000069230 84 0.863 - 0.863 - - - - - - - zgc:153738 [Source:ZFIN;Acc:ZDB-GENE-061013-622]
25. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 0.863 - - - - - 0.863 - - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
26. slc12a10.3 ENSDARG00000055253 127 0.86 - 0.860 - - - - - - - slc12a10.3 solute carrier family 12 (sodium/potassium/chloride transporters), member 10, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-060503-518]
27. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 0.859 - 0.859 - - - - - - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
28. DGKE ENSDARG00000104793, ENSDARG00000113394, ENSDARG00000114662 45 0.858 - 0.858 - - - - - - - diacylglycerol kinase, epsilon [Source:ZFIN;Acc:ZDB-GENE-090512-7]
29. dnal1 ENSDARG00000034042 339 0.858 - 0.858 - - - - - - - dynein, axonemal, light chain 1 [Source:ZFIN;Acc:ZDB-GENE-040801-178]
30. tmem176l.2 ENSDARG00000089399 22 0.858 - 0.858 - - - - - - - transmembrane protein 176l.2 [Source:ZFIN;Acc:ZDB-GENE-080829-12]
31. zdhhc16b ENSDARG00000015989 193 0.856 - 0.856 - - - - - - - zinc finger, DHHC-type containing 16b [Source:ZFIN;Acc:ZDB-GENE-040426-1301]
32. RNF157 ENSDARG00000057481 215 0.85 - 0.850 - - - - - - - ring finger protein 157 [Source:HGNC Symbol;Acc:HGNC:29402]
33. si:ch211-208f21.2 ENSDARG00000094177 61 0.85 - 0.850 - - - - - - - si:ch211-208f21.2 [Source:ZFIN;Acc:ZDB-GENE-110914-134]
34. AKAP13_1 ENSDARG00000079994 444 0.849 - 0.849 - - - - - - - A-kinase anchoring protein 13 [Source:HGNC Symbol;Acc:HGNC:371]
35. CU856237.1 CU856237.1 153 0.849 - 0.849 - - - - - - -
36. tg ENSDARG00000020084 40 0.845 - 0.845 - - - - - - - thyroglobulin [Source:ZFIN;Acc:ZDB-GENE-030519-1]
37. acsl3a ENSDARG00000032079 897 0.844 - 0.844 - - - - - - - acyl-CoA synthetase long chain family member 3a [Source:ZFIN;Acc:ZDB-GENE-050420-181]
38. BX548021.2_1 BX548021.2_1 164 0.844 - 0.844 - - - - - - -
39. ZBTB41 ENSDARG00000054984 464 0.844 - 0.844 - - - - - - - zinc finger and BTB domain containing 41 [Source:ZFIN;Acc:ZDB-GENE-130530-649]
40. ptgs1 ENSDARG00000052148 2443 0.844 - 0.844 - - - - - - - prostaglandin-endoperoxide synthase 1 [Source:ZFIN;Acc:ZDB-GENE-020530-1]
41. gucy1a3 89 0.844 - 0.844 - - - - - - - guanylate cyclase 1, soluble, alpha 3
42. ZDHHC21 ENSDARG00000110709 295 0.843 - 0.843 - - - - - - - zinc finger, DHHC-type containing 21 [Source:ZFIN;Acc:ZDB-GENE-080401-2]
43. spata6l ENSDARG00000004874 149 0.843 - 0.843 - - - - - - - spermatogenesis associated 6-like [Source:ZFIN;Acc:ZDB-GENE-040426-1369]
44. C19H1orf51 C19H1orf51 1776 0.841 - 0.841 - - - - - - -
45. stx8 ENSDARG00000103173 180 0.841 - 0.841 - - - - - - - syntaxin 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1360]
46. kidins220b ENSDARG00000017338 1937 0.84 - - - - - 0.840 - - - kinase D-interacting substrate 220b [Source:ZFIN;Acc:ZDB-GENE-030131-7824]
47. sema3ga ENSDARG00000042545 1603 0.838 - 0.838 - - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ga [Source:ZFIN;Acc:ZDB-GENE-050513-3]
48. cldne ENSDARG00000043128 6960 0.838 - 0.838 - - - - - - - claudin e [Source:ZFIN;Acc:ZDB-GENE-010328-5]
49. HHLA2 HHLA2 295 0.836 - 0.836 - - - - - - -
50. ZC3H11A ENSDARG00000009754 281 0.834 - 0.834 - - - - - - - zinc finger CCCH-type containing 11A [Source:ZFIN;Acc:ZDB-GENE-030131-3272]
51. CU929089.1 CU929089.1 479 0.834 - 0.834 - - - - - - -
52. ago4 ENSDARG00000100854 496 0.834 - 0.834 - - - - - - - argonaute RISC catalytic component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5357]
53. CR388015.1 CR388015.1 311 0.833 - 0.833 - - - - - - -
54. fut9 fut9 519 0.832 - 0.832 - - - - - - -
55. acss3 ENSDARG00000032218 226 0.83 - 0.830 - - - - - - - acyl-CoA synthetase short chain family member 3 [Source:ZFIN;Acc:ZDB-GENE-060503-816]
56. ca9 ENSDARG00000102300 193 0.83 - 0.830 - - - - - - - carbonic anhydrase IX [Source:ZFIN;Acc:ZDB-GENE-080818-5]
57. kcnh6 kcnh6 59 0.83 - 0.830 - - - - - - -
58. irgf3 ENSDARG00000062820 20 0.83 - 0.830 - - - - - - - immunity-related GTPase family, f3 [Source:ZFIN;Acc:ZDB-GENE-051212-6]
59. ap1b1 ENSDARG00000020621 3874 0.829 - 0.829 - - - - - - - adaptor related protein complex 1 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-061025-1]
60. PLEKHA2 PLEKHA2 43 0.828 - 0.828 - - - - - - -
61. ppp1r14ab ENSDARG00000017710, ENSDARG00000110779 3296 0.828 - 0.828 - - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ab [Source:ZFIN;Acc:ZDB-GENE-040426-1783]
62. DSP DSP 199 0.828 - 0.828 - - - - - - -
63. sp8b ENSDARG00000056666 3988 0.828 - - - - - 0.828 - - - sp8 transcription factor b [Source:ZFIN;Acc:ZDB-GENE-030131-3654]
64. notum1a ENSDARG00000031126 825 0.827 - 0.827 - - - - - - - notum, palmitoleoyl-protein carboxylesterase a [Source:ZFIN;Acc:ZDB-GENE-120807-2]
65. nr1i2 ENSDARG00000029766 458 0.827 - 0.827 - - - - - - - nuclear receptor subfamily 1, group I, member 2 [Source:ZFIN;Acc:ZDB-GENE-030903-3]
66. si:ch73-73d17.3 si:ch73-73d17.3 925 0.827 - 0.827 - - - - - - -
67. col7a1l ENSDARG00000069692 44 0.825 - 0.825 - - - - - - - collagen type VII alpha 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9861]
68. EPS8 78 0.824 - 0.824 - - - - - - - epidermal growth factor receptor pathway substrate 8, transcript variant X14
69. gnb1b ENSDARG00000104372 1077 0.824 - 0.824 - - - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2855]
70. MYO5C ENSDARG00000104235 1285 0.823 - 0.823 - - - - - - - myosin VC [Source:ZFIN;Acc:ZDB-GENE-131127-196]
71. etv4 ENSDARG00000018303, ENSDARG00000115855 3889 0.822 - 0.822 - - - - - - - ets variant 4 [Source:ZFIN;Acc:ZDB-GENE-990415-71]
72. st3gal3b ENSDARG00000015252 465 0.822 - 0.822 - - - - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 3b [Source:ZFIN;Acc:ZDB-GENE-050411-13]
73. CCL19_1 CCL19_1 40 0.822 - 0.822 - - - - - - -
74. znf385b ENSDARG00000006065 817 0.821 - 0.821 - - - - - - - zinc finger protein 385B [Source:ZFIN;Acc:ZDB-GENE-030616-154]
75. im:7162084 im:7162084 665 0.821 - - - - - 0.821 - - -
76. msxc msxc 3142 0.82 - 0.820 - - - - - - -
77. cdh7 582 0.82 - - - - - 0.820 - - - cadherin 7, type 2, transcript variant X1
78. CU683898.1 CU683898.1 203 0.819 - 0.819 - - - - - - -
79. foxa3 ENSDARG00000012788 405 0.819 - 0.819 - - - - - - - forkhead box A3 [Source:ZFIN;Acc:ZDB-GENE-980526-423]
80. zgc:113100 zgc:113100 647 0.819 - 0.819 - - - - - - -
81. rassf10a 417 0.819 - 0.819 - - - - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
82. zgc:64085 zgc:64085 955 0.818 - 0.818 - - - - - - -
83. cldn12 ENSDARG00000003927 2024 0.816 - 0.816 - - - - - - - claudin 12 [Source:ZFIN;Acc:ZDB-GENE-010328-14]
84. crabp2b ENSDARG00000030449 3091 0.814 - 0.814 - - - - - - - cellular retinoic acid binding protein 2, b [Source:ZFIN;Acc:ZDB-GENE-050208-52]
85. gpr37l1b ENSDARG00000056774, ENSDARG00000114481 143 0.814 - - - - - 0.814 - - - G protein-coupled receptor 37 like 1b [Source:ZFIN;Acc:ZDB-GENE-081104-324]
86. sytl2 sytl2 259 0.814 - 0.814 - - - - - - -
87. sb:cb252 sb:cb252 2480 0.813 - 0.813 - - - - - - -
88. srgap1 srgap1 2320 0.812 - - - - - 0.812 - - -
89. eps8l3 eps8l3 144 0.811 - 0.811 - - - - - - -
90. si:dkey-4i23.5 ENSDARG00000092137 152 0.811 - 0.811 - - - - - - - si:dkey-4i23.5 [Source:ZFIN;Acc:ZDB-GENE-070912-543]
91. nudt9 ENSDARG00000087927 1148 0.811 - 0.811 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2669]
92. strumpellin 212 0.81 - 0.810 - - - - - - - strumpellin
93. si:dkey-229d2.7 ENSDARG00000092460 15 0.808 - 0.808 - - - - - - - si:dkey-229d2.7 [Source:ZFIN;Acc:ZDB-GENE-060526-265]
94. TRIM46 TRIM46 73 0.807 - - - - - 0.807 - - -
95. setdb1b ENSDARG00000099021 2937 0.806 - - - - - - 0.806 - - SET domain, bifurcated 1b [Source:ZFIN;Acc:ZDB-GENE-061013-224]
96. cux2b ENSDARG00000086345 519 0.805 - - - - - 0.805 - - - cut-like homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-081104-176]
97. spint2 ENSDARG00000069476, ENSDARG00000113265 4147 0.805 - 0.805 - - - - - - - serine peptidase inhibitor, Kunitz type, 2 [Source:ZFIN;Acc:ZDB-GENE-061013-323]
98. si:ch211-212o1.2 ENSDARG00000011498, ENSDARG00000110768 378 0.805 - 0.805 - - - - - - - si:ch211-212o1.2 [Source:ZFIN;Acc:ZDB-GENE-041111-310]
99. armc1l ENSDARG00000020887 1219 0.805 - 0.805 - - - - - - - armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]
100. emx1 ENSDARG00000039569 787 0.805 - 0.805 - - - - - - - empty spiracles homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-031007-7]

There are 580 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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