Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for irx7

Gene Name Gene ID Reads Annotation
irx7 ENSDARG00000002601 72 iroquois homeobox 7 [Source:ZFIN;Acc:ZDB-GENE-020103-1]










Genes with expression patterns similar to irx7

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. irx7 ENSDARG00000002601 72 6 - - 1.000 1.000 1.000 - 1.000 1.000 1.000 iroquois homeobox 7 [Source:ZFIN;Acc:ZDB-GENE-020103-1]
2. dmbx1a ENSDARG00000009922 284 2.439 - - 0.794 - 0.836 - - - 0.809 diencephalon/mesencephalon homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020117-1]
3. sostdc1a ENSDARG00000068892 127 2.339 - - - - 0.792 - 0.844 0.703 - sclerostin domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-050417-64]
4. FOXL2 239 2.319 - - 0.843 0.735 - - - 0.741 - forkhead box L2, transcript variant X1
5. tbx1 ENSDARG00000031891 397 1.756 - - 0.908 - 0.848 - - - - T-box 1 [Source:ZFIN;Acc:ZDB-GENE-030805-5]
6. pax2b ENSDARG00000032578 12 1.707 - - - - 0.871 - 0.836 - - paired box 2b [Source:ZFIN;Acc:ZDB-GENE-001030-4]
7. nkx2.5 ENSDARG00000018004, ENSDARG00000116714 23 1.664 - - 0.818 - 0.846 - - - - NK2 homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-321]
8. phox2a ENSDARG00000007406 470 1.659 - - 0.840 - 0.819 - - - - paired-like homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-000223-14]
9. foxl2 61 1.647 - - 0.840 - 0.807 - - - - forkhead box L2, transcript variant X1
10. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 1.642 - - - - - - - 0.772 0.870 scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
11. efna2 efna2 428 1.635 - - 0.771 - 0.864 - - - -
12. barx1 ENSDARG00000007407 344 1.623 - - 0.891 - - - - 0.732 - BARX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-050522-28]
13. COL9A1 COL9A1 264 1.594 - - - - 0.860 - - 0.734 -
14. tm6sf2 ENSDARG00000029057 43 1.569 - - 0.786 - 0.783 - - - - transmembrane 6 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-060503-338]
15. irx1a ENSDARG00000101831 644 1.553 - - - - 0.800 - - - 0.753 iroquois homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040707-1]
16. pax5 ENSDARG00000037383 319 1.553 - - 0.837 - 0.716 - - - - paired box 5 [Source:ZFIN;Acc:ZDB-GENE-001030-2]
17. FGFBP1 FGFBP1 7 1.549 - - - - 0.846 - - 0.703 -
18. cyp26c1 ENSDARG00000056029 1426 1.54 - - - 0.793 0.747 - - - - cytochrome P450, family 26, subfamily C, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050714-2]
19. DMBX1 DMBX1 140 1.529 - - 0.716 - 0.813 - - - -
20. dmrt2b ENSDARG00000070013, ENSDARG00000114365, ENSDARG00000114967 57 1.522 - - - - 0.715 - - 0.807 - doublesex and mab-3 related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-080813-1]
21. pcdh19 ENSDARG00000034344 2378 1.499 - - - - 0.755 - - - 0.744 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
22. scrt1a ENSDARG00000100821 2687 1.494 - - - 0.739 0.755 - - - - scratch family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-080219-30]
23. mab21l2 ENSDARG00000015266 1687 1.481 - - 0.712 - 0.769 - - - - mab-21-like 2 [Source:ZFIN;Acc:ZDB-GENE-011101-3]
24. tcf21 ENSDARG00000036869, ENSDARG00000111209 37 1.481 - - 0.772 - 0.709 - - - - transcription factor 21 [Source:ZFIN;Acc:ZDB-GENE-051113-88]
25. fgfbp2 fgfbp2 14 1.465 - - 0.743 - 0.722 - - - -
26. emx2 ENSDARG00000039701 827 1.464 - - - - - - - 0.738 0.726 empty spiracles homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-990415-54]
27. slc29a1a ENSDARG00000101289 2074 1.449 - - - 0.745 0.704 - - - - solute carrier family 29 (equilibrative nucleoside transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050913-138]
28. tnni1b ENSDARG00000052708 478 1.447 - - - - 0.742 - - 0.705 - troponin I type 1b (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-041212-37]
29. CLDN22 CLDN22 114 1.435 - - - - - - 0.722 0.713 -
30. CT573256.1 ENSDARG00000091657 18 1 - - - - - - 1.000 - - serine/threonine-protein kinase VRK1-like [Source:NCBI gene;Acc:794952]
31. vsig8a ENSDARG00000054050, ENSDARG00000114869 69 1 - - - - - - 1.000 - - V-set and immunoglobulin domain containing 8a [Source:ZFIN;Acc:ZDB-GENE-050417-338]
32. PAMR1 ENSDARG00000093480 40 1 - - - - - - 1.000 - - peptidase domain containing associated with muscle regeneration 1 [Source:ZFIN;Acc:ZDB-GENE-100422-12]
33. SLITRK1 2 1 - - - - - - 1.000 - - SLIT and NTRK like family member 1
34. figf 48 1 - - - - - - 1.000 - - c-fos induced growth factor, transcript variant X2
35. elovl2 ENSDARG00000045414 119 1 - - - - - - 1.000 - - ELOVL fatty acid elongase 2 [Source:ZFIN;Acc:ZDB-GENE-060421-5612]
36. SGCZ ENSDARG00000106258 2 1 - - - - - - 1.000 - - sarcoglycan zeta [Source:HGNC Symbol;Acc:HGNC:14075]
37. nts ENSDARG00000057887 5 1 - - - - - - 1.000 - - neurotensin [Source:ZFIN;Acc:ZDB-GENE-091204-433]
38. tbx6 ENSDARG00000011785 132 1 - - - - - - 1.000 - - T-box 6 [Source:ZFIN;Acc:ZDB-GENE-020416-5]
39. hepacam 73 1 - - - - - - 1.000 - - hepatic and glial cell adhesion molecule, transcript variant X2
40. syngr2b_1 ENSDARG00000104470 24 1 - - - - - - 1.000 - - synaptogyrin 2b [Source:ZFIN;Acc:ZDB-GENE-070424-19]
41. zglp1 ENSDARG00000067669 6 1 - - - - - - 1.000 - - zinc finger, GATA-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-359]
42. si:dkey-241l7.10 si:dkey-241l7.10 38 1 - - - - - - 1.000 - -
43. PEG3_20 PEG3_20 6 1 - - - - - - 1.000 - -
44. si:dkey-31f5.8 ENSDARG00000094428 2 1 - - - - - - 1.000 - - si:dkey-31f5.8 [Source:ZFIN;Acc:ZDB-GENE-041210-182]
45. si:dkey-264b2.3 19 1 - - - - - - 1.000 - - si:dkey-264b2.3, transcript variant X2
46. MFAP4 ENSDARG00000090783 8 1 - - - - - - 1.000 - - microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
47. C17orf105 C17orf105 1 1 - - - - - - 1.000 - -
48. chd5 ENSDARG00000105083 132 1 - - - - - - 1.000 - - chromodomain helicase DNA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-120314-2]
49. CABZ01078314.1 CABZ01078314.1 44 1 - - - - - - 1.000 - -
50. tekt3 ENSDARG00000045038 9 1 - - - - - - 1.000 - - tektin 3 [Source:ZFIN;Acc:ZDB-GENE-080130-2]
51. znrf2b ENSDARG00000098792 0 1 - - - - - - 1.000 - - zinc and ring finger 2b [Source:ZFIN;Acc:ZDB-GENE-060929-24]
52. ME1 ENSDARG00000053215 8 1 - - - - - - 1.000 - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
53. pdcl ENSDARG00000009480 12 1 - - - - - - 1.000 - - phosducin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2365]
54. si:rp71-20i5.5 si:rp71-20i5.5 9 1 - - - - - - 1.000 - -
55. CCHCR1_1 CCHCR1_1 1 1 - - - - - - 1.000 - -
56. PLA2R1 ENSDARG00000077474 45 1 - - - - - - 1.000 - - phospholipase A2 receptor 1 [Source:ZFIN;Acc:ZDB-GENE-120323-1]
57. cacna2d2 cacna2d2 16 1 - - - - - - 1.000 - -
58. rx1 ENSDARG00000071684 247 1 - - - - - - 1.000 - - retinal homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-236]
59. zgc:92590 ENSDARG00000040282 13 1 - - - - - - 1.000 - - zgc:92590 [Source:ZFIN;Acc:ZDB-GENE-041024-15]
60. ZNF337_11 ZNF337_11 11 1 - - - - - - 1.000 - -
61. FAM83F FAM83F 8 1 - - - - - - 1.000 - -
62. si:dkey-4c15.12 ENSDARG00000095350 119 1 - - - - - - 1.000 - - si:dkey-4c15.12 [Source:ZFIN;Acc:ZDB-GENE-050420-351]
63. akt3a ENSDARG00000104810 21 1 - - - - - - 1.000 - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
64. CU459152.1 CU459152.1 407 1 - - - - - - 1.000 - -
65. CABZ01088927.1 CABZ01088927.1 0 1 - - - - - - 1.000 - -
66. zgc:171759_6 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 15 1 - - - - - - 1.000 - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
67. slc44a1a ENSDARG00000015946 10 1 - - - - - - 1.000 - - solute carrier family 44 (choline transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050417-204]
68. knca7 17 1 - - - - - - 1.000 - - potassium voltage-gated channel, shaker-related subfamily, member 7
69. il12a ENSDARG00000038878 3 1 - - - - - - 1.000 - - interleukin 12a [Source:ZFIN;Acc:ZDB-GENE-060724-1]
70. hcar1-4 ENSDARG00000087084, ENSDARG00000113450 27 1 - - - - - - 1.000 - - hydroxycarboxylic acid receptor 1-4 [Source:ZFIN;Acc:ZDB-GENE-111111-10]
71. mapk9 ENSDARG00000077364 38 1 - - - - - - 1.000 - - mitogen-activated protein kinase 9 [Source:ZFIN;Acc:ZDB-GENE-091117-28]
72. hcn3 ENSDARG00000027192 6 1 - - - - - - 1.000 - - hyperpolarization activated cyclic nucleotide-gated potassium channel 3 [Source:ZFIN;Acc:ZDB-GENE-060503-193]
73. CABZ01071446.1 CABZ01071446.1 4 1 - - - - - - 1.000 - -
74. VSTM2A ENSDARG00000021909 0 1 - - - - - - 1.000 - - V-set and transmembrane domain containing 2A [Source:HGNC Symbol;Acc:HGNC:28499]
75. KCNN2 ENSDARG00000014939 25 1 - - - - - - 1.000 - - potassium calcium-activated channel subfamily N member 2 [Source:HGNC Symbol;Acc:HGNC:6291]
76. si:ch73-138e16.2 ENSDARG00000104894 1 1 - - - - - - 1.000 - - si:ch73-138e16.2 [Source:ZFIN;Acc:ZDB-GENE-070705-201]
77. DLG4 3 1 - - - - - - 1.000 - - discs large MAGUK scaffold protein 4, transcript variant X5
78. si:dkey-103e21.5 ENSDARG00000091926, ENSDARG00000110300 12 1 - - - - - - 1.000 - - si:dkey-103e21.5 [Source:ZFIN;Acc:ZDB-GENE-060526-186]
79. NEK11 ENSDARG00000087564 40 1 - - - - - - 1.000 - - NIMA-related kinase 11 [Source:ZFIN;Acc:ZDB-GENE-100922-73]
80. pak1 ENSDARG00000103959 32 1 - - - - - - 1.000 - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
81. fkbp1ab ENSDARG00000033567, ENSDARG00000110465, ENSDARG00000116437 83 1 - - - - - - 1.000 - - FK506 binding protein 1Ab [Source:ZFIN;Acc:ZDB-GENE-040927-9]
82. SLC44A1 SLC44A1 43 1 - - - - - - 1.000 - -
83. si:dkey-241l7.2 ENSDARG00000105335 6 1 - - - - - - 1.000 - - si:dkey-241l7.2 [Source:ZFIN;Acc:ZDB-GENE-041014-240]
84. si:ch211-187f22.2 si:ch211-187f22.2 7 1 - - - - - - 1.000 - -
85. si:ch211-57m13.10 ENSDARG00000095902 1 1 - - - - - - 1.000 - - si:ch211-57m13.10 [Source:ZFIN;Acc:ZDB-GENE-110411-264]
86. syt15 ENSDARG00000079926 8 1 - - - - - - 1.000 - - synaptotagmin XV [Source:ZFIN;Acc:ZDB-GENE-090527-2]
87. sfxn5a ENSDARG00000103595 11 1 - - - - - - 1.000 - - sideroflexin 5a [Source:ZFIN;Acc:ZDB-GENE-090312-174]
88. aff4 ENSDARG00000001857 134 1 - - - - - - 1.000 - - AF4/FMR2 family, member 4 [Source:ZFIN;Acc:ZDB-GENE-100910-5]
89. BX322612.1 BX322612.1 236 1 - - - - - - 1.000 - -
90. poln ENSDARG00000103961, ENSDARG00000113911 57 1 - - - - - - 1.000 - - polymerase (DNA directed) nu [Source:ZFIN;Acc:ZDB-GENE-100917-1]
91. CABZ01075242.1 ENSDARG00000114227 9 1 - - - - - - 1.000 - -
92. si:ch211-155d24.7 si:ch211-155d24.7 17 1 - - - - - - 1.000 - -
93. ela3l ENSDARG00000007276 11 1 - - - - - - 1.000 - - elastase 3 like [Source:ZFIN;Acc:ZDB-GENE-060710-2]
94. sec22bb ENSDARG00000100435 33 1 - - - - - - 1.000 - - SEC22 homolog B, vesicle trafficking protein b [Source:ZFIN;Acc:ZDB-GENE-030131-5488]
95. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1 - - - - - - 1.000 - - sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
96. CT826375.4 CT826375.4 3 1 - - - - - - 1.000 - -
97. CABZ01113374.2 CABZ01113374.2 27 1 - - - - - - 1.000 - -
98. si:dkey-208n4.1 si:dkey-208n4.1 10 1 - - - - - - 1.000 - -
99. PDE4B PDE4B 13 1 - - - - - - 1.000 - -
100. si:ch211-157l15.4 si:ch211-157l15.4 92 1 - - - - - - 1.000 - -

There are 392 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA